Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120230X.Seq
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX538093-1|CAD98012.1| 1732|Homo sapiens hypothetical protein pr...    31   1.8  
BC037496-1|AAH37496.1|  504|Homo sapiens DYNC2H1 protein protein.      31   1.8  
AK131453-1|BAD18598.1| 1300|Homo sapiens protein ( Homo sapiens ...    31   1.8  
AK095579-1|BAC04578.1|  806|Homo sapiens protein ( Homo sapiens ...    31   1.8  
AK021818-1|BAB13905.1|  553|Homo sapiens protein ( Homo sapiens ...    31   1.8  
AB082528-1|BAC02706.2| 1685|Homo sapiens KIAA1997 protein protein.     31   1.8  
AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.     31   1.8  
AK126622-1|BAC86616.1| 1060|Homo sapiens protein ( Homo sapiens ...    31   2.4  
AK093802-1|BAC04225.1|  675|Homo sapiens protein ( Homo sapiens ...    31   2.4  
AK093672-1|BAC04217.1|  224|Homo sapiens protein ( Homo sapiens ...    29   7.3  
BC038980-1|AAH38980.1|  245|Homo sapiens MYADML protein protein.       29   9.7  
BC031088-1|AAH31088.1|  245|Homo sapiens MYADML protein protein.       29   9.7  
AK057470-1|BAB71502.1|  245|Homo sapiens protein ( Homo sapiens ...    29   9.7  

>BX538093-1|CAD98012.1| 1732|Homo sapiens hypothetical protein
            protein.
          Length = 1732

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 274  HAIWSMVWIWSACSNVDLYLPSTWTR 197
            HA++S+ W  +AC     Y+P  WT+
Sbjct: 1287 HALFSLAWFHAACQERRNYIPQGWTK 1312


>BC037496-1|AAH37496.1|  504|Homo sapiens DYNC2H1 protein protein.
          Length = 504

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 274 HAIWSMVWIWSACSNVDLYLPSTWTR 197
           HA++S+ W  +AC     Y+P  WT+
Sbjct: 108 HALFSLAWFHAACQERRNYIPQGWTK 133


>AK131453-1|BAD18598.1| 1300|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16607 fis, clone TESTI4010382, highly  similar
           to Rattus norvegicus dynein, cytoplasmic, heavy chain 2
           (Dnch2). ).
          Length = 1300

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 274 HAIWSMVWIWSACSNVDLYLPSTWTR 197
           HA++S+ W  +AC     Y+P  WT+
Sbjct: 855 HALFSLAWFHAACQERRNYIPQGWTK 880


>AK095579-1|BAC04578.1|  806|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38260 fis, clone FCBBF3001377, highly similar to
           Rattus norvegicus dnchc2 mRNA for cytoplasmic dynein
           heavy ).
          Length = 806

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 274 HAIWSMVWIWSACSNVDLYLPSTWTR 197
           HA++S+ W  +AC     Y+P  WT+
Sbjct: 361 HALFSLAWFHAACQERRNYIPQGWTK 386


>AK021818-1|BAB13905.1|  553|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11756 fis, clone HEMBA1005595, weakly similar to
           DYNEIN HEAVY CHAIN, CYTOSOLIC. ).
          Length = 553

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 274 HAIWSMVWIWSACSNVDLYLPSTWTR 197
           HA++S+ W  +AC     Y+P  WT+
Sbjct: 108 HALFSLAWFHAACQERRNYIPQGWTK 133


>AB082528-1|BAC02706.2| 1685|Homo sapiens KIAA1997 protein protein.
          Length = 1685

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 274  HAIWSMVWIWSACSNVDLYLPSTWTR 197
            HA++S+ W  +AC     Y+P  WT+
Sbjct: 1240 HALFSLAWFHAACQERRNYIPQGWTK 1265


>AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.
          Length = 4464

 Score = 31.5 bits (68), Expect = 1.8
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +3

Query: 117  LGD-EQPVRFVAKDIASSLKYVNCERAIRVHVDGKYKSTFEHADQIQ-TMLQIAWQSRAT 290
            LGD EQ +R   +D+       NC  A+R  ++ + K   E A Q+  T  QI W +  T
Sbjct: 1647 LGDVEQTMRVTLRDLLR-----NCHLALRKFLNKRDKWVKEWAGQVVITASQIQWTADVT 1701

Query: 291  RCICT 305
            +C+ T
Sbjct: 1702 KCLLT 1706


>AK126622-1|BAC86616.1| 1060|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44660 fis, clone BRACE3002344, weakly  similar
           to Vegetatible incompatibility protein HET-E-1. ).
          Length = 1060

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +1

Query: 283 GRPAVFAPTHSAHYQIWRDSTDNEVQIALRHRITRMAFGGGHSSSAMHGQVR 438
           GR  V    HS   Q W   +     +AL H    +A   G SS+  H Q+R
Sbjct: 665 GRLVVVEDLHSGAQQHWSGHSAEISTLALSHSAQVLASASGRSSTTAHCQIR 716


>AK093802-1|BAC04225.1|  675|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36483 fis, clone THYMU2017601. ).
          Length = 675

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = +1

Query: 283 GRPAVFAPTHSAHYQIWRDSTDNEVQIALRHRITRMAFGGGHSSSAMHGQVR 438
           GR  V    HS   Q W   +     +AL H    +A   G SS+  H Q+R
Sbjct: 278 GRLVVVEDLHSGAQQHWSGHSAEISTLALSHSAQVLASASGRSSTTAHCQIR 329


>AK093672-1|BAC04217.1|  224|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36353 fis, clone THYMU2007307. ).
          Length = 224

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 17/65 (26%), Positives = 27/65 (41%)
 Frame = -3

Query: 265 WSMVWIWSACSNVDLYLPSTWTRIARSQFTYFKLLAMSLATNLTGCSSPSTYLSVNSSWP 86
           W ++W  ++C+  DL +P  WT+            A+    N   C +    L+ N SW 
Sbjct: 3   WQLIWAKASCTWQDLVVPQRWTQQRHR--------ALETIQNAVECRA----LNANPSWN 50

Query: 85  NLNCP 71
             N P
Sbjct: 51  TSNVP 55


>BC038980-1|AAH38980.1|  245|Homo sapiens MYADML protein protein.
          Length = 245

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 22/87 (25%), Positives = 38/87 (43%)
 Frame = -3

Query: 274 HAIWSMVWIWSACSNVDLYLPSTWTRIARSQFTYFKLLAMSLATNLTGCSSPSTYLSVNS 95
           HAI ++V+   AC  V      TWTR    + T +    + L   L    +   ++ +NS
Sbjct: 59  HAIAAIVFSGIAC--VAYATEVTWTRARPGEITDYMASELGLLKVLETFVACLIFVFINS 116

Query: 94  SWPNLNCPILT*AILIY*IKFIKHVIT 14
            +   N P L   + +Y + F+   +T
Sbjct: 117 PYVYHNRPALEWCVAVYALCFVLAALT 143


>BC031088-1|AAH31088.1|  245|Homo sapiens MYADML protein protein.
          Length = 245

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 22/87 (25%), Positives = 38/87 (43%)
 Frame = -3

Query: 274 HAIWSMVWIWSACSNVDLYLPSTWTRIARSQFTYFKLLAMSLATNLTGCSSPSTYLSVNS 95
           HAI ++V+   AC  V      TWTR    + T +    + L   L    +   ++ +NS
Sbjct: 59  HAIAAIVFSGIAC--VAYATEVTWTRARPGEITDYMASELGLLKVLETFVACLIFVFINS 116

Query: 94  SWPNLNCPILT*AILIY*IKFIKHVIT 14
            +   N P L   + +Y + F+   +T
Sbjct: 117 PYVYHNRPALEWCVAVYALCFVLAALT 143


>AK057470-1|BAB71502.1|  245|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32908 fis, clone TESTI2005860, moderately
           similar to MYELOID UPREGULATED PROTEIN. ).
          Length = 245

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 22/87 (25%), Positives = 38/87 (43%)
 Frame = -3

Query: 274 HAIWSMVWIWSACSNVDLYLPSTWTRIARSQFTYFKLLAMSLATNLTGCSSPSTYLSVNS 95
           HAI ++V+   AC  V      TWTR    + T +    + L   L    +   ++ +NS
Sbjct: 59  HAIAAIVFSGIAC--VAYATEVTWTRARPGEITDYMASELGLLKVLETFVACLIFVFINS 116

Query: 94  SWPNLNCPILT*AILIY*IKFIKHVIT 14
            +   N P L   + +Y + F+   +T
Sbjct: 117 PYVYHNRPALEWCVAVYALCFVLAALT 143


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,742,178
Number of Sequences: 237096
Number of extensions: 1802092
Number of successful extensions: 3780
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3780
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)