Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120230X.Seq
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   3.3  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   3.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   3.3  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   5.7  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   7.5  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   7.5  
AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.        21   7.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   10.0 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   10.0 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   10.0 

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +1

Query: 322 YQIWRDSTDNEVQIALRHRITRMAFGG 402
           Y +WR++  +   +  R    ++A GG
Sbjct: 399 YMVWRETISSTATLGFRVEGIKLAHGG 425


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +1

Query: 322 YQIWRDSTDNEVQIALRHRITRMAFGG 402
           Y +WR++  +   +  R    ++A GG
Sbjct: 314 YMVWRETISSTATLGFRVEGIKLAHGG 340


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +1

Query: 322 YQIWRDSTDNEVQIALRHRITRMAFGG 402
           Y +WR++  +   +  R    ++A GG
Sbjct: 633 YMVWRETISSTATLGFRVEGIKLAHGG 659


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 216 CRRRGHVLPVHNLHILNCWRCPWPQ 142
           CR + HV  +H+  ++  +R P  Q
Sbjct: 148 CRPKIHVFSLHDNKLITMYRFPQNQ 172


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 301 QIQRVALLCHAIWSMVW 251
           ++ +VAL+  ++W M W
Sbjct: 275 KLAKVALMTISLWFMAW 291


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 299 LHPHTVLIT 325
           LHPHT ++T
Sbjct: 104 LHPHTAMVT 112


>AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.
          Length = 76

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 301 QIQRVALLCHAIWSMVW 251
           ++ +VAL+  ++W M W
Sbjct: 25  KLAKVALMTISLWFMAW 41


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +3

Query: 105 LRYVLGDEQPVRFVAKDIASSLKYVNCERAIR 200
           L YV+ D     F  + +  ++KY N    +R
Sbjct: 236 LGYVMPDRTFAPFFTRVVTDTIKYRNDNNIVR 267


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = -1

Query: 261 AWSGFGRHAQTSICTCRRRGHVL 193
           +W G G++    + +CR+   +L
Sbjct: 261 SWLGSGQYISDFVGSCRKTDQIL 283


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = -1

Query: 261 AWSGFGRHAQTSICTCRRRGHVL 193
           +W G G++    + +CR+   +L
Sbjct: 299 SWLGSGQYISDFVGSCRKTDQIL 321


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,348
Number of Sequences: 438
Number of extensions: 3364
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)