Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120228.Seq
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    30   0.018
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    25   0.52 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.90 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   3.6  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   3.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.8  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.4  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 30.3 bits (65), Expect = 0.018
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
 Frame = -3

Query: 778 PSKSSASDVVENPKFSASEYICSLSGSLIR----SLFSCSNC--FSIGPNRSSNSFCCAS 617
           P+KSS S    N   S S+++CS+ G         ++SC  C  F     R   S+ C  
Sbjct: 65  PNKSSTSPYPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACRE 124

Query: 616 TKS 608
            K+
Sbjct: 125 EKN 127


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -3

Query: 688 SLFSCSNCFS-IGPNRSSNSFCCASTKSNSCSSDCCSF 578
           ++ + SN  S + P  S NS  C S  S +CS    SF
Sbjct: 12  TMATSSNAMSPMTPTYSMNSMSCVSMPSMNCSPQGASF 49


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +2

Query: 41  SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPS 202
           SS P+ +TS      +S P+  +  +    SS P+T +         AT+QPP+
Sbjct: 82  SSLPTQRTS------TSNPTYSSRSVMTSCSSVPTTASYGSDLYFPGATSQPPT 129


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
 Frame = +2

Query: 95  PSTQATGLSFGVSSAPSTQATAL-SFGVSSATTQPPSTGINFGTGTSAGLTFGT 253
           P T+ATGLS        ++A AL                +N  +  + GLTF T
Sbjct: 41  PDTEATGLSLPACRLFCSEAAALWPKPTGEVHVGTTLVKVNINSINTGGLTFET 94


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 14/63 (22%), Positives = 24/63 (38%)
 Frame = +2

Query: 44  STPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFGT 223
           STP   T        S+  T    +S      P+T  T+ +    +++T   S+    GT
Sbjct: 125 STPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASSTSSTSSTEKAGT 184

Query: 224 GTS 232
             +
Sbjct: 185 NNN 187


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 285 TIHYHPVWHNGT 320
           T+H+H VW  G+
Sbjct: 198 TLHWHGVWQRGS 209


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 285 TIHYHPVWHNGT 320
           T+H+H VW  G+
Sbjct: 198 TLHWHGVWQRGS 209


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -1

Query: 687 HCSLAVTVSPSVLIDLPILFVVPVQSL-IHVPVIA 586
           +CSLA+ V   +LI+     ++ V SL IHV   A
Sbjct: 415 YCSLAIFVLCELLIEGTTSILINVPSLIIHVSTSA 449


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 116 LSFGVSSAPSTQATALSFGVSSATTQPPSTG 208
           + FGV SAPST    L   +    T    TG
Sbjct: 101 MDFGVRSAPSTHEELLEV-LKKVVTYSVKTG 130


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 556 FSSTIFSPFAISNVS 512
           F  + F PF ISN+S
Sbjct: 227 FEKSKFEPFLISNIS 241


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,084
Number of Sequences: 336
Number of extensions: 3632
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)