Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120228.Seq
(783 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0423 + 3337401-3337419,3337777-3338235,3338650-3338735,333... 44 2e-04
12_01_0425 + 3347804-3348284,3348544-3348759,3349038-3349588,334... 40 0.003
12_02_0674 - 21745321-21746223,21746229-21747608 38 0.007
01_06_1393 - 36999631-36999723,37000244-37000393,37000413-370005... 38 0.012
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 33 0.26
11_01_0242 - 1862106-1862210,1862302-1862320,1863082-1863257,186... 33 0.34
05_06_0052 + 25199253-25199304,25199676-25199949,25200709-25201069 32 0.45
12_01_0239 - 1793612-1793716,1793808-1793826,1794424-1794599,179... 32 0.59
10_08_1022 + 22337332-22339398 32 0.59
10_01_0026 - 351737-353443 31 0.78
12_02_0228 + 15903452-15903812,15904153-15904202,15904615-159047... 31 1.0
10_08_0239 - 16099673-16100251 30 2.4
06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281 30 2.4
06_03_0854 + 25400855-25403741,25406174-25407708 29 3.2
04_01_0200 + 2400929-2402161 29 3.2
12_01_0730 + 6505759-6508806 29 4.2
12_01_0714 + 6223269-6226250 29 4.2
11_01_0490 - 3782195-3782305,3782929-3783021,3783199-3783294,378... 29 4.2
10_06_0083 + 10471648-10471806,10473261-10473343,10473384-104738... 29 4.2
07_03_1164 + 24451808-24451868,24452690-24452923,24453735-244537... 29 4.2
06_03_0963 + 26368959-26369462,26370900-26371205 29 4.2
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 29 5.5
11_06_0657 + 25938382-25938443,25938511-25938718,25939222-259392... 29 5.5
07_03_1112 + 24062099-24062116,24062255-24062662,24062762-24062797 29 5.5
04_03_1002 - 21617339-21617362,21618476-21618565,21618755-216194... 29 5.5
03_02_0532 + 9255634-9257034,9257234-9257347,9257975-9258239,925... 29 5.5
06_01_0179 - 1388602-1389572,1390060-1390129,1390346-1390439,139... 28 7.3
05_04_0260 + 19501643-19503010 28 7.3
05_03_0458 + 14280953-14281866,14281964-14282912 28 7.3
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 28 9.6
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 28 9.6
08_02_0181 + 13923658-13923661,13925518-13925681,13925879-139259... 28 9.6
03_05_0480 + 24740567-24741559 28 9.6
03_02_0310 + 7315185-7316820,7318332-7318879 28 9.6
02_05_0622 + 30437533-30437577,30437694-30438177,30438301-304383... 28 9.6
02_05_0296 + 27639981-27640766 28 9.6
02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,176... 28 9.6
01_03_0121 - 12722492-12722920 28 9.6
>12_01_0423 +
3337401-3337419,3337777-3338235,3338650-3338735,
3338974-3339022,3339225-3339533,3339555-3339710,
3339871-3340086,3340404-3340906,3341050-3341116,
3341215-3341272,3341561-3341699,3341840-3341956,
3342069-3342246,3342459-3343093
Length = 996
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 TPST-QTTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVS 178
TPS TT +FG ++ TS FG SSAP+ +TG FG S+ P ++ + G
Sbjct: 257 TPSFGATTTPAFGTTTPAFGSTSTSVFGASSAPAFGSTG--FGSSTTPGFGSSGSTPGFG 314
Query: 179 SATTQPPSTGINFGTGTSAGLTFGT 253
++++ ++ NFG+ S G T T
Sbjct: 315 ASSSGMSTSAFNFGSSPSFGQTIPT 339
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 14 QTTGLSFGVSSTPST-QTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFG 172
Q + +FG +ST + Q S FG S+ ++ +FG S AP AT+ +FG
Sbjct: 105 QPSAPAFGSTSTGAFGQPSTQAFGTPSSSPFGSSTPAFGASPAPVFGATSSTFG 158
>12_01_0425 +
3347804-3348284,3348544-3348759,3349038-3349588,
3349752-3349815,3349915-3349975,3350271-3350409,
3350561-3350677,3350794-3350971,3351218-3351828
Length = 805
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +2
Query: 17 TTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATAL-SFGVSSATTQ 193
TT +FG ++ TS FG +SAP+ ++G FG S P+ A++ FG SS+ +
Sbjct: 62 TTTPAFGTTTPAFGSTSPSLFGATSAPAFGSSG--FGSSGTPAFGASSTPGFGASSSASF 119
Query: 194 PPST-GINFGTGTSAGLTFGT 253
ST +FG+ S G T T
Sbjct: 120 GTSTSAFSFGSSPSFGQTAST 140
Score = 37.9 bits (84), Expect = 0.009
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +2
Query: 32 FGVSSTPSTQTSGL-GFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTG 208
FG S TP+ S GFG SS+ S + +F S+PS TA +FG + T G
Sbjct: 95 FGSSGTPAFGASSTPGFGASSSASFGTSTSAFSFGSSPSFGQTASTFGSTPFGTSTSPFG 154
Query: 209 IN---FGTGTSAGLTFG 250
FG+ T+A TFG
Sbjct: 155 AQTSPFGSQTAAP-TFG 170
Score = 37.1 bits (82), Expect = 0.016
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 29 SFGVSSTPSTQTSGLGFGVSSAPSTQATGL-SFGVSSAPSTQATALSFGVSSATTQPPST 205
+FG ++TP+ T+ FG +S AT +FG S S+ A FG SS S+
Sbjct: 58 AFGATTTPAFGTTTPAFGSTSPSLFGATSAPAFGSSGFGSSGTPA--FGASSTPGFGASS 115
Query: 206 GINFGTGTSAGLTFGT 253
+FGT TSA +FG+
Sbjct: 116 SASFGTSTSA-FSFGS 130
Score = 30.3 bits (65), Expect = 1.8
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 11 TQTTGLSFGVSSTPSTQTSGLGFGVS-SAPSTQATGLSFGVSSAPSTQATALSFGVSSAT 187
TQT+ F +STP +S FG S S PS+ +TGLS +TQ+ L F S A
Sbjct: 319 TQTSSSLFA-NSTPGFASSS-PFGASLSNPSSFSTGLSL-----VNTQSAGL-FSSSPAF 370
Query: 188 TQPPSTGINFGTGTS 232
Q P T + G G S
Sbjct: 371 AQQPFTQASSGFGLS 385
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +2
Query: 8 STQTTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSAT 187
ST TT + ++T + +S +S P T S +S P A++ FG S +
Sbjct: 288 STSTTLFNSPFNNTSAASSSPFA-STTSIPLFTQTSSSLFANSTPGF-ASSSPFGASLSN 345
Query: 188 TQPPSTGINFGTGTSAGL 241
STG++ SAGL
Sbjct: 346 PSSFSTGLSLVNTQSAGL 363
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 38.3 bits (85), Expect = 0.007
Identities = 32/81 (39%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 5 PSTQTTG-LSFGVSSTPST-QTSGLGFGVSSAPSTQATG-LSFGVSSAPSTQATALSFGV 175
P+T TG LS S PST T L PST T LS S PST T+L +
Sbjct: 493 PTTACTGELSTPTSQIPSTASTRELSTATGKIPSTPRTNPLSTATSKIPSTPRTSL---L 549
Query: 176 SSATTQPPSTGINFGTGTSAG 238
SS+T++ PST T+ G
Sbjct: 550 SSSTSKIPSTPSTCELSTATG 570
>01_06_1393 -
36999631-36999723,37000244-37000393,37000413-37000500,
37001362-37001465,37003115-37003192,37004247-37004369,
37004508-37004615
Length = 247
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 510 WDTLLIANGEKIVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQ 668
WD ++ N ++ L V V Q SLE +L+ + QKE++ L ME++
Sbjct: 62 WDRRILQNRTVLIRLEAEVAKVVETQTSLERQLELIETHQKEVDKALQSMEEE 114
>10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 33.1 bits (72), Expect = 0.26
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +3
Query: 513 DTLLIANGEKIVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQLLQENNDR 692
D LL + EL + V ++ SLE +L V +++ELE+L+ E+Q +Q D+
Sbjct: 1350 DDLLRVHMSTEAELADRVAALEAAIHSLEIDLARVNEEKEELEELIKSNEEQFVQVGTDK 1409
Query: 693 IKD 701
+D
Sbjct: 1410 SRD 1412
>11_01_0242 -
1862106-1862210,1862302-1862320,1863082-1863257,
1863359-1863405,1864443-1865022
Length = 308
Score = 32.7 bits (71), Expect = 0.34
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 5 PSTQTTGLSFGVSSTPSTQ-TSGLGFGVSSAPSTQATGLSFGV---SSAP 142
PSTQ G G + PSTQ G G + PS+Q G +G SSAP
Sbjct: 66 PSTQPYGSGGGYGAPPSTQRPQSYGGGYGAPPSSQPYGAPYGAPPPSSAP 115
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = +2
Query: 35 GVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGIN 214
G +S+ S G G G + PSTQ G G + PSTQ G A G
Sbjct: 46 GKTSSSSAPYYGGGGGYGAPPSTQPYGSGGGYGAPPSTQRPQSYGGGYGAPPSSQPYGAP 105
Query: 215 FGTGTSAGLTFG 250
+G + +G
Sbjct: 106 YGAPPPSSAPYG 117
>05_06_0052 + 25199253-25199304,25199676-25199949,25200709-25201069
Length = 228
Score = 32.3 bits (70), Expect = 0.45
Identities = 27/77 (35%), Positives = 35/77 (45%)
Frame = +2
Query: 20 TGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPP 199
T S G P+T SG+G G+ + ST TG G + A GV + T
Sbjct: 95 TDPSSGTCKYPAT-ASGVGTGMGTGTST-GTGTGVGTGGTGTGGA-----GVGAGT---- 143
Query: 200 STGINFGTGTSAGLTFG 250
TG+ GTGT AG+ G
Sbjct: 144 GTGVGTGTGTGAGMGTG 160
>12_01_0239 -
1793612-1793716,1793808-1793826,1794424-1794599,
1794701-1794747,1795760-1796291
Length = 292
Score = 31.9 bits (69), Expect = 0.59
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 35 GVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGIN 214
G +S+ S G G G + PSTQ G G + PS+Q +G ++ P
Sbjct: 46 GKTSSSSAPYYGGGGGYGAPPSTQPYGSGGGYGAPPSSQPYGAPYGAPPPSSAPYGAPGG 105
Query: 215 FGT 223
+G+
Sbjct: 106 YGS 108
>10_08_1022 + 22337332-22339398
Length = 688
Score = 31.9 bits (69), Expect = 0.59
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 32 FGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQA-TALSFGVSSATTQPPSTG 208
F VS T S +GLG + + Q T ++ G+SSAP +A A +FG+ + P +TG
Sbjct: 155 FLVSMTQSFP-NGLGLPGQALFAAQPTWIATGLSSAPCDRARQAYTFGLRTMVCLPLATG 213
Query: 209 I 211
+
Sbjct: 214 V 214
>10_01_0026 - 351737-353443
Length = 568
Score = 31.5 bits (68), Expect = 0.78
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +2
Query: 2 TPSTQTTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSS 181
TPS + S S +P + +S ++AP A G+S + PS+++++ S S
Sbjct: 16 TPSAPSPSSSLSKSPSPPSPSSPPPPASTNAPPKSAGGVSSSTQAQPSSESSSESTTTPS 75
Query: 182 ATTQPPSTGINFG 220
A + S G + G
Sbjct: 76 APAERKSGGSSRG 88
>12_02_0228 +
15903452-15903812,15904153-15904202,15904615-15904713,
15907146-15907415,15908045-15908125,15909033-15909599,
15909677-15910053,15910326-15911613
Length = 1030
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +2
Query: 41 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFG 220
+ST S Q+SG+ +AP + + L+ G SS+PS+ A + SS+ T S F
Sbjct: 702 TSTSSVQSSGIQEPAITAPFSTVSSLA-GGSSSPSSMIFAGATSQSSSITTSGSVPFQFS 760
Query: 221 TGTSA 235
+ +S+
Sbjct: 761 SQSSS 765
>10_08_0239 - 16099673-16100251
Length = 192
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +2
Query: 65 SGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFGTGTSAGLT 244
SG G G S+ ++Q S+G SS S G A PS G G+GT +G +
Sbjct: 89 SGYGTGSGSSQTSQNRYYSYGGSS--SAGGAGAGGGAGQAGGYWPSNGQGSGSGTGSGSS 146
Query: 245 F 247
+
Sbjct: 147 Y 147
>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
Length = 518
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/76 (31%), Positives = 38/76 (50%)
Frame = +2
Query: 8 STQTTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSAT 187
S+ G SS +SG G S+ S+ +TG+S+G S A S ++ S S+A
Sbjct: 254 SSSGAGSGSSASSGYGGSSSGSMSGSGSSSSSGSTGMSYGSSGAGSFSGSS-SGSNSNAG 312
Query: 188 TQPPSTGINFGTGTSA 235
+ +G N G G+S+
Sbjct: 313 SM---SGANSGAGSSS 325
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 29.5 bits (63), Expect = 3.2
Identities = 27/96 (28%), Positives = 34/96 (35%), Gaps = 6/96 (6%)
Frame = -1
Query: 300 GGSGWCGRNSGRGNSFV-----PKVNPADVPVPKLIPVLG-G*VVAELTPKLSAVAWVLG 139
GGS GR G + V P + A P P P L ++A + A
Sbjct: 594 GGSRGRGRGCGLTPAVVTVGAPPPPSAAPAPAPASAPSLEPNDIIAPVVSSTLAPGASAA 653
Query: 138 AELTPKLSPVACVLGAELTPNPRPEVCVLGVELTPK 31
A P ++P A L A L P P P PK
Sbjct: 654 AAAAPAVAPPAAALEAILIPMPPPAAAAAAAAPVPK 689
Score = 29.5 bits (63), Expect = 3.2
Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = -1
Query: 303 RGGSGWCGRNSGRGNSFVP-KVNPADVPVPKLIPVLGG*VVAELTPKLSAVAWVLGAELT 127
RG CG S + P + A VPVP P + A ++P S +A A
Sbjct: 1229 RGRGRGCGLTSAVVTAGAPLPPSAAPVPVPASAPTMEP--NATISPGSSTLAPGASAA-A 1285
Query: 126 PKLSPVACVLGAELTPNPRPEVCVLGVELTPK 31
P ++P V A L P P P V PK
Sbjct: 1286 PAVAPPTAVPEAILVPMPPPAVAAAAAAPVPK 1317
>04_01_0200 + 2400929-2402161
Length = 410
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +2
Query: 74 GFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFGTGTSAGLTFG 250
G GV+ +G S + +A +F ++ PP +N G G AG FG
Sbjct: 201 GLGVAGVSFHVGSGASRAAVYRGAIEAARAAFDAAAGLGMPPMRVLNIGGGFVAGAAFG 259
>12_01_0730 + 6505759-6508806
Length = 1015
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -3
Query: 712 SLSGSLIRSLFSCSN--CFSIGPNRSSNSFCC 623
S+ G + RSL SC N IG N+ S+SF C
Sbjct: 713 SIEGKIPRSLVSCRNLEILDIGSNQISDSFPC 744
>12_01_0714 + 6223269-6226250
Length = 993
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -3
Query: 712 SLSGSLIRSLFSCSN--CFSIGPNRSSNSFCC 623
S+ G + RSL SC N IG N+ S+SF C
Sbjct: 691 SIEGKIPRSLVSCRNLEILDIGSNQISDSFPC 722
>11_01_0490 -
3782195-3782305,3782929-3783021,3783199-3783294,
3783373-3783521,3783886-3784039,3784110-3784205,
3784290-3784379,3784856-3785014,3785150-3785371,
3785552-3785668,3785753-3785824,3786768-3786836,
3786947-3787051,3787248-3787562,3787814-3788809
Length = 947
Score = 29.1 bits (62), Expect = 4.2
Identities = 25/97 (25%), Positives = 49/97 (50%)
Frame = +3
Query: 432 GEYQQMDLRIGRAGTDVHQPSYPD*CWDTLLIANGEKIVELNEAVETVKNEQQSLEHELD 611
GEY QM R GR G D+ C +++ + + + E+ + + +++NE L+ +
Sbjct: 468 GEYIQMSGRAGRRGKDIRGI-----C---VIMIDEKALPEVVQKITSLENEATLLDSSGE 519
Query: 612 FVLAQQKELEDLLGPMEKQLLQENNDRIKDPEREHMY 722
LA+ +L + +EK+++ E + PER +Y
Sbjct: 520 TDLAEYHKLGLDISELEKKIMSE----MIRPERALLY 552
>10_06_0083 +
10471648-10471806,10473261-10473343,10473384-10473810,
10475806-10475932,10476329-10476471,10476687-10476749,
10476833-10476898,10477047-10477085
Length = 368
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = +1
Query: 34 WCEFNAKYAN-LWSGIWCQFRAKYASDWA*FWCQL 135
WC+ + L S IW A+ +W WCQL
Sbjct: 118 WCDPGVNFGEFLGSRIWPTVPARNRGNWGPIWCQL 152
>07_03_1164 +
24451808-24451868,24452690-24452923,24453735-24453768,
24454372-24454627
Length = 194
Score = 29.1 bits (62), Expect = 4.2
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +2
Query: 20 TGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPP 199
TG + +S PS SG F S++ + +T + G ++ T T + G TT
Sbjct: 88 TGTATLTTSDPSV--SGCSFPASASGAGTSTTPTMGGTTGTMTPGT-FTPGTGMGTT--- 141
Query: 200 STGINFGTGTSAGLTFG 250
TG GTGT+ G G
Sbjct: 142 -TGTGMGTGTTTGTGLG 157
>06_03_0963 + 26368959-26369462,26370900-26371205
Length = 269
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 205 GARWLSSGRAYPETKRGSLGTW 140
GA W+ SGR Y E + G TW
Sbjct: 101 GAGWVVSGRGYREYRLGDYSTW 122
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -3
Query: 199 RWLSSGRAYPETKRGSLGTWRGADTKTKPSRLRTWRGTDTKSQTRGL 59
R++S GR + +RG G R P R R+ RG D +S +R L
Sbjct: 1192 RFISDGRGRYDNRRGFGGKGRDRSYSRSPDRGRS-RGYDRRSGSRSL 1237
>11_06_0657 +
25938382-25938443,25938511-25938718,25939222-25939268,
25939473-25939805,25940529-25940613,25940689-25940884,
25941012-25941182,25941261-25941318,25941429-25941657,
25942296-25943183
Length = 758
Score = 28.7 bits (61), Expect = 5.5
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Frame = +3
Query: 441 QQMDLRIGRAGTDVHQPSYPD*CWDTLLIANGE-KIVELNEAVETVKNEQQSL--EHELD 611
Q MD + G +++ + D + A GE + ++ ++ V T++NE S E +L
Sbjct: 337 QIMDCHLVHHGEYLNKAKFHPNTLDQSVKAYGEFQTMQASQEVSTIENEVLSRVSEEQLS 396
Query: 612 FVLAQQKE-LEDLLGPMEKQLLQENN 686
V + +E+ L +EK LLQ+++
Sbjct: 397 QVSTSAGDTMEEFLASLEKDLLQDDS 422
>07_03_1112 + 24062099-24062116,24062255-24062662,24062762-24062797
Length = 153
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 512 PTLIWVAWLMNVRSCSSNSKVHLLIFS 432
P WVAWL+ V +C+S S + L S
Sbjct: 85 PAASWVAWLLAVSTCASVSGMFLAYIS 111
>04_03_1002 -
21617339-21617362,21618476-21618565,21618755-21619432,
21619536-21619772,21619849-21619896,21619995-21620045,
21620301-21620426,21620557-21620697,21621165-21621401,
21622467-21622571,21622812-21622982,21623306-21623380,
21623754-21623936,21624151-21624297,21624365-21624472,
21624605-21624709,21625109-21625213,21625322-21625381,
21625512-21625579,21625876-21625954,21626208-21626267,
21626445-21626498,21626834-21626886,21627405-21627494,
21628265-21628362,21628464-21628852
Length = 1193
Score = 28.7 bits (61), Expect = 5.5
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = +2
Query: 29 SFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTG 208
S G STPS+ +S G G + PS+ + G G + PS A A S SS PS+
Sbjct: 42 SGGRPSTPSSSSSAAGGGRPTTPSSSSAG---GRPTTPSA-AFARSTTPSSGRPTTPSSA 97
Query: 209 INFGTG 226
+ G
Sbjct: 98 SSRAAG 103
>03_02_0532 +
9255634-9257034,9257234-9257347,9257975-9258239,
9258346-9258461
Length = 631
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +2
Query: 86 SSAPSTQATGLSFG---VSSAPSTQATALSFGVSSATTQPPSTGINFGTGTS 232
S+A S++ + S +S+ P+T A+ SF + + T PPST F + S
Sbjct: 50 SAAASSETSYFSLSGAAISANPATSASMPSFRLYNELTWPPSTACTFESSRS 101
>06_01_0179 -
1388602-1389572,1390060-1390129,1390346-1390439,
1390587-1390687,1391152-1391220,1391328-1391482,
1392193-1392241,1392611-1392739,1392825-1393580,
1394711-1394902
Length = 861
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 53 STQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSF 169
+T +SG GVSS + + LS G PST A SF
Sbjct: 102 TTNSSGPSIGVSSLVTDANSSLSGGAQLQPSTSMNADSF 140
>05_04_0260 + 19501643-19503010
Length = 455
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 98 STQATGLSFGVSSAPSTQATALSFGVSSATTQPPST 205
ST A+ + FG +S +T+ AL GV A T+P ++
Sbjct: 379 STGASWVVFGANSMVATKGGALCLGVVDAGTEPQTS 414
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 83 VSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPST 205
+SS+P+T + S+G +S PS+ A SS +T ST
Sbjct: 4 ISSSPATASASSSYGPTSPPSSCRNAAPSPPSSNSTPTSST 44
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 38 VSSTPSTQTSGLGFGVSSAPST-QATGLSFGVSSAPSTQATALSFGVSSATTQPPST 205
+SS+P+T ++ +G +S PS+ + S S++ T +T + S TT PS+
Sbjct: 4 ISSSPATASASSSYGPTSPPSSCRNAAPSPPSSNSTPTSSTTPTVPPSLTTTSSPSS 60
>12_02_1286 -
27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/40 (27%), Positives = 26/40 (65%)
Frame = +3
Query: 552 LNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQL 671
L E + +++E+ ++E E+D + ++ELE +G E+++
Sbjct: 759 LREKLRRLESEKSNIEEEIDRLEPVKEELETRIGKKEREV 798
>12_02_0953 -
24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = +2
Query: 38 VSSTP--STQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGI 211
V TP + T G G SSA + G S P+ T ++ + + ++PP +
Sbjct: 123 VGGTPYSAVSTPGRHRGKSSAAAASEGG-GGSTQSTPTKSVTKPAYSIGMSASRPPMSSG 181
Query: 212 NFGTGTSAGLTFGTK 256
G G G + +
Sbjct: 182 QRGAGLGLGFSMAAR 196
>08_02_0181 +
13923658-13923661,13925518-13925681,13925879-13925978,
13926072-13926244,13926486-13927016
Length = 323
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/63 (31%), Positives = 26/63 (41%)
Frame = +2
Query: 62 TSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFGTGTSAGL 241
T G FG A + A GL G + S+G S ++ P G+ FGTG G
Sbjct: 245 TYGGSFGGGYAGGSYAGGLG-GAYGRDAGGFGGSSYGPSYDSSSGPGAGVGFGTGGLYGA 303
Query: 242 TFG 250
G
Sbjct: 304 RGG 306
>03_05_0480 + 24740567-24741559
Length = 330
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 690 GHCSLAVTVSPSVLIDLPILFVVPVQSLIHVPVI 589
G + T S S L+D PI+ PV ++H P+I
Sbjct: 193 GEAGMLATESASYLVD-PIVTQPPVPEIVHTPLI 225
>03_02_0310 + 7315185-7316820,7318332-7318879
Length = 727
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +2
Query: 77 FGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINFGTGTS 232
+GV+ T +T S G+ +A ++Q+T + + + T PP + NF T TS
Sbjct: 546 YGVTDYSVTGST--SKGILAAQASQSTDMR-SLQTPTITPPKSSFNFKTTTS 594
>02_05_0622 +
30437533-30437577,30437694-30438177,30438301-30438354,
30438565-30438789,30438891-30438943,30439591-30439714,
30439823-30440077,30440171-30440517,30440661-30441266,
30441504-30441546,30441624-30441757
Length = 789
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 303 VWHNGTGKNHSFDFNN 350
VWH GT K + FDF N
Sbjct: 485 VWHYGTIKKYEFDFQN 500
>02_05_0296 + 27639981-27640766
Length = 261
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +2
Query: 41 SSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTG 208
++ P QT+GL S P++ + G +AP + SS P S+G
Sbjct: 11 TAPPQVQTAGLPAAASPGPASPHSPSEQGDKTAPGAATASTMTTASSGEPSPRSSG 66
>02_01_0267 -
1766071-1766261,1766368-1766569,1766719-1766814,
1767414-1767560,1767635-1767800,1767907-1767973,
1772850-1772949,1773029-1773099,1773199-1773382,
1773784-1773929,1774484-1774663,1774737-1774824,
1775634-1775838,1775945-1776081,1776529-1776612,
1776718-1776894,1777050-1777194,1777642-1777763,
1777846-1778091,1778571-1778789,1779016-1779094,
1779178-1779257,1779291-1779320
Length = 1053
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +3
Query: 564 VETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQLLQENNDRI-----KDPEREHMYSL 728
V+T+KN +++E + + + ++ L D+L P ++ D + D E +H S
Sbjct: 562 VKTIKNNMKAIEEKEEHLKNVERNLSDILSPCLHDADKKMTDLVTKQQQMDAESDHAKSE 621
Query: 729 AENF 740
E+F
Sbjct: 622 LEHF 625
>01_03_0121 - 12722492-12722920
Length = 142
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = -3
Query: 247 EG*SG*CTSSKIDSGARWLSSGRAYPETKRGSLGTWRGADTKTKPSRLRTWRGTDTKSQT 68
EG SG SG +WL + PE + G + T GA ++ GT +
Sbjct: 55 EGSSGSNPLPSSRSGRQWLGARVVDPEARDGGVATGGGARSQEAGGGFGDGSGTAAHPKA 114
Query: 67 RGLRTWR 47
R WR
Sbjct: 115 ELKRGWR 121
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,784,639
Number of Sequences: 37544
Number of extensions: 411826
Number of successful extensions: 1816
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1791
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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