Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120228.Seq
         (783 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    27   0.65 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    27   0.87 
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       26   1.5  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   3.5  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    24   4.6  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   4.6  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   4.6  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    24   6.1  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   8.1  

>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 27.1 bits (57), Expect = 0.65
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 32  FGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGV 130
           FG+ S+    T  LG  ++ AP     GL FGV
Sbjct: 344 FGIISSIMFSTQSLGLQIAQAPVCIIGGLGFGV 376


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 26.6 bits (56), Expect = 0.87
 Identities = 22/68 (32%), Positives = 30/68 (44%)
 Frame = +2

Query: 2   TPSTQTTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSS 181
           TP  ++   S    ST  TQT+  G  V S P   ATG +   S+   T    LS G S+
Sbjct: 121 TPEHKSAASSSCSLSTLETQTATAGASVQSLPIAIATGAT--SSTVSLTYEDELSPGGSA 178

Query: 182 ATTQPPST 205
                P++
Sbjct: 179 RRKTKPNS 186


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 24/83 (28%), Positives = 33/83 (39%)
 Frame = +2

Query: 2   TPSTQTTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSS 181
           TPST T       S  P+T T   G   ++             S AP+   T+ +   + 
Sbjct: 403 TPSTTT----MPPSVAPTTSTVAPGTTTTTPTGANPGTTQPPTSDAPNHTTTSTTTEGNP 458

Query: 182 ATTQPPSTGINFGTGTSAGLTFG 250
            TT+PPS     G G  AG  +G
Sbjct: 459 GTTRPPS-----GDGPCAGGRYG 476


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +3

Query: 549  ELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQLLQENNDRIKDPE 707
            +L+EA++  K  Q+ LE  +      Q++LE+    MEK   +EN  R K  E
Sbjct: 886  KLSEALKQQKTLQKELESWIQKEKEAQEKLEEDGKRMEKWATKENMLRQKIDE 938


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 285 TIHYHPVWHNGT 320
           TIH+H +W  GT
Sbjct: 241 TIHWHGIWQRGT 252


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 285 TIHYHPVWHNGT 320
           TIH+H +W  GT
Sbjct: 241 TIHWHGIWQRGT 252


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +3

Query: 531 NGEKIVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEK 665
           N  +I++L   +E  +NE   L    + +L    EL +L   +EK
Sbjct: 91  NSREIIDLEAQLEKTENEIVELSENNNALLQNFMELTELKHVLEK 135


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 684 CSLAVTVSPSVLIDLPILFVVP 619
           CSL+V ++   ++D  +L V+P
Sbjct: 140 CSLSVAITHVTMVDFKLLQVIP 161


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +2

Query: 41   SSTPSTQTSGLGFGVSSAP-STQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINF 217
            S+  + + +G G G  S P ST A   +    S+ +      + G+S+ T  PP +G   
Sbjct: 1211 STLGNDRGAGEGGGSRSVPPSTFAQNSNASNCSSVNYNKLKANNGLSTTTVPPPLSGTGQ 1270

Query: 218  GTGTSAGLT 244
             T  S  LT
Sbjct: 1271 TTTNSNLLT 1279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,146
Number of Sequences: 2352
Number of extensions: 16207
Number of successful extensions: 47
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)