Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120228.Seq
(783 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 51 1e-06
At1g10390.1 68414.m01171 nucleoporin family protein contains Pfa... 50 2e-06
At1g59660.1 68414.m06710 nucleoporin family protein contains Pfa... 40 0.001
At3g10650.1 68416.m01281 expressed protein 38 0.006
At2g28670.1 68415.m03485 disease resistance-responsive family pr... 37 0.013
At2g40070.1 68415.m04923 expressed protein 33 0.16
At3g51120.1 68416.m05598 zinc finger (CCCH-type) family protein ... 32 0.49
At1g69295.1 68414.m07947 beta-1,3-glucanase-related low similari... 31 0.86
At1g68790.1 68414.m07863 expressed protein 31 0.86
At5g40390.1 68418.m04899 raffinose synthase family protein simil... 29 3.5
At1g35680.1 68414.m04436 50S ribosomal protein L21, chloroplast ... 29 3.5
At2g24310.1 68415.m02906 expressed protein 29 4.6
At1g75090.1 68414.m08721 methyladenine glycosylase family protei... 29 4.6
At1g60670.1 68414.m06830 expressed protein contains similarity t... 29 4.6
At1g21810.1 68414.m02729 expressed protein 29 4.6
At5g27330.1 68418.m03263 expressed protein 28 6.1
At4g38410.1 68417.m05429 dehydrin, putative similar to dehydrin ... 28 6.1
At4g23750.2 68417.m03417 AP2 domain-containing transcription fac... 28 6.1
At4g23750.1 68417.m03416 AP2 domain-containing transcription fac... 28 6.1
At3g28790.1 68416.m03593 expressed protein 28 6.1
At3g17205.1 68416.m02196 HECT-domain-containing protein / ubiqui... 28 6.1
At3g12930.1 68416.m01611 expressed protein contains Pfam domain ... 28 6.1
At2g22770.1 68415.m02701 basic helix-loop-helix (bHLH) family pr... 28 6.1
At1g33480.1 68414.m04144 zinc finger (C3HC4-type RING finger) fa... 28 6.1
At4g22240.1 68417.m03218 plastid-lipid associated protein PAP, p... 28 8.0
At3g49520.1 68416.m05412 F-box family protein contains weak hit ... 28 8.0
At1g66830.1 68414.m07596 leucine-rich repeat transmembrane prote... 28 8.0
At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family... 28 8.0
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 50.8 bits (116), Expect = 1e-06
Identities = 35/76 (46%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +2
Query: 17 TTGLSFG--VSSTP-STQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSAT 187
+TG FG VSSTP S+ T GFG SS P SFG S+ S+ + FG SSA+
Sbjct: 47 STGFGFGSSVSSTPASSTTPSFGFGASSTP-------SFGFGSSASSSTPSFGFG-SSAS 98
Query: 188 TQPPSTGINFGTGTSA 235
P ST +FG GT+A
Sbjct: 99 VTPASTTPSFGFGTAA 114
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +2
Query: 2 TPSTQTT-GLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVS 178
TP++ TT FG SSTPS GFG S++ ST + G FG S++ + +T SFG
Sbjct: 59 TPASSTTPSFGFGASSTPS-----FGFGSSASSSTPSFG--FGSSASVTPASTTPSFGFG 111
Query: 179 SATTQPPSTGINFGTGTS 232
+A + FG+ T+
Sbjct: 112 TAASSSAPAPSLFGSSTT 129
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +2
Query: 20 TGLSFGVSSTPSTQTSGLGFGVSSAPSTQATG-LSFGVSSAPSTQATALSFGVSSATTQP 196
+G FG S++ + G +S+ ++ T LSF + + + +T FG S ++T
Sbjct: 2 SGFPFGQSNSVGGFSFGSSSATNSSSASSTTSPLSFSFNQSSNPSSTGFGFGSSVSSTPA 61
Query: 197 PSTGINFGTGTSAGLTFG 250
ST +FG G S+ +FG
Sbjct: 62 SSTTPSFGFGASSTPSFG 79
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +3
Query: 510 WDTLLIANGEKIVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQLLQENND 689
WD ++ N + ++ L V V Q SLE +L+ + Q+E++ L ME++ + ND
Sbjct: 571 WDKRILQNRDVLLRLEIEVAKVVETQSSLERQLELIETHQQEVDKALQSMEEEAERIYND 630
Query: 690 RIK 698
K
Sbjct: 631 ERK 633
Score = 34.3 bits (75), Expect = 0.092
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Frame = +2
Query: 2 TPSTQTTGLSFGVSSTPSTQTSGLGFGVSSA-PSTQATGLS---FGVSSAPSTQATALS- 166
TP++ T FG +++ S L FG S+ S+ A G S F SSA ST + S
Sbjct: 100 TPASTTPSFGFGTAASSSAPAPSL-FGSSTTNASSAAPGSSPFGFVTSSASSTATPSSSL 158
Query: 167 FGVSSATTQPPSTGINFGTGTSAGLT 244
FG +++ PS+ FG ++G T
Sbjct: 159 FGAPASSAATPSSS-PFGAAPASGST 183
Score = 33.9 bits (74), Expect = 0.12
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Frame = +2
Query: 5 PSTQTTGLSFGVSSTPSTQTS---GLGFGVSSAPSTQATGLSFGVSSA-----PSTQATA 160
P++ T+G F +++T +T +S SSAP++ SFGV+S+ P++ A
Sbjct: 384 PASSTSGAVFSIATTTTTSSSTPAATSAPASSAPASTMAFPSFGVTSSATNTTPASSAAT 443
Query: 161 LS---FGVSSATTQPPST 205
S FG++S+T ST
Sbjct: 444 FSTTGFGLASSTPATGST 461
Score = 32.7 bits (71), Expect = 0.28
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Frame = +2
Query: 8 STQTTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPST-QATALSFGVSSA 184
+T ++ FGVS+ S+ TS S++P + +TG SF S+A ST +T S +A
Sbjct: 300 ATTSSPSPFGVSTFNSSSTSNTS-NASASPFSASTGFSFLKSTASSTTSSTTPSAPPQTA 358
Query: 185 TTQPP-------STGINFGTGTSA 235
++ ++G N TG+SA
Sbjct: 359 SSSSSFSFGTSANSGFNLSTGSSA 382
Score = 31.9 bits (69), Expect = 0.49
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Frame = +2
Query: 2 TPSTQTTGLSFGVSSTPSTQTSGLG--------FGVS----SAPSTQATGLS--FGVSSA 139
TPS+ G ++TPS+ G FG S SAPS+ + S FG SS+
Sbjct: 153 TPSSSLFGAPASSAATPSSSPFGAAPASGSTPLFGSSPSLFSAPSSASASNSSLFGASSS 212
Query: 140 PSTQATALSFGVSSATTQPPSTGINFGTGTSAGLTFG 250
+T + L SSAT PS + S+ FG
Sbjct: 213 AATSTSPLFGAPSSATGATPSFSVASSAPGSSSSIFG 249
Score = 31.1 bits (67), Expect = 0.86
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 15/86 (17%)
Frame = +2
Query: 32 FGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGV-SSAPSTQATAL-------SFGV-SSA 184
FG SS+ +T TS L FG S+ +T AT SF V SSAP + ++ SF V SSA
Sbjct: 207 FGASSSAATSTSPL-FGAPSS-ATGATP-SFSVASSAPGSSSSIFGATGSSPSFSVASSA 263
Query: 185 TTQPPS----TGIN--FGTGTSAGLT 244
+ PS TG + FG+ +SAG T
Sbjct: 264 SGSSPSIFGATGSSPFFGSSSSAGST 289
Score = 29.5 bits (63), Expect = 2.6
Identities = 27/84 (32%), Positives = 40/84 (47%)
Frame = +2
Query: 2 TPSTQTTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSS 181
T S+ G S STPS F SS+ +T ++ FGVS+ S+ + S +S
Sbjct: 274 TGSSPFFGSSSSAGSTPSL------FASSSSGATTSSPSPFGVSTFNSSSTSNTS--NAS 325
Query: 182 ATTQPPSTGINFGTGTSAGLTFGT 253
A+ STG +F T++ T T
Sbjct: 326 ASPFSASTGFSFLKSTASSTTSST 349
>At1g10390.1 68414.m01171 nucleoporin family protein contains Pfam
profiles: PF04096 nucleoporin autopeptidase, PF03093
nucleoporin FG repeat family
Length = 1041
Score = 49.6 bits (113), Expect = 2e-06
Identities = 37/86 (43%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +2
Query: 2 TPSTQTTGLSFGVSSTPST-QTSGLGFGVSSAPSTQATGL-SFGVSSAPSTQATALSFGV 175
TP T +FG STPS TS FG SS P+ AT +FG S++PS AT
Sbjct: 144 TPFGATNTPAFGAPSTPSFGATSTPSFGASSTPAFGATNTPAFGASNSPSFGATNTPAFG 203
Query: 176 SSATTQPPSTGINFG-TGTSAGLTFG 250
+S T STG FG TG +G FG
Sbjct: 204 ASPTPAFGSTGTTFGNTGFGSGGAFG 229
Score = 40.3 bits (90), Expect = 0.001
Identities = 38/87 (43%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Frame = +2
Query: 29 SFGVSSTPSTQTSGLGFGVSSAPSTQATGL-SFGVSSAPSTQAT-ALSFGVSSA----TT 190
SFG SSTP T+ FG S PS AT SFG SS P+ AT +FG S++ T
Sbjct: 139 SFG-SSTPFGATNTPAFGAPSTPSFGATSTPSFGASSTPAFGATNTPAFGASNSPSFGAT 197
Query: 191 QPPSTGIN----FG-TGTSAGLT-FGT 253
P+ G + FG TGT+ G T FG+
Sbjct: 198 NTPAFGASPTPAFGSTGTTFGNTGFGS 224
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +2
Query: 29 SFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTG 208
+FG SS+P+ S FG S A S FG + + FG S+ +QP
Sbjct: 78 TFGASSSPAFGNSTPAFGASPASSPFGGSSGFGQKPLGFSTPQSNPFGNSTQQSQPAFGN 137
Query: 209 INFGTGTSAGLT 244
+FG+ T G T
Sbjct: 138 TSFGSSTPFGAT 149
Score = 35.5 bits (78), Expect = 0.040
Identities = 30/78 (38%), Positives = 37/78 (47%)
Frame = +2
Query: 11 TQTTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATT 190
+ TT FG SS T T FG SS P ++ FG SAP AT +FG S +T
Sbjct: 484 SSTTTSVFGSSSAFGTTTPSPLFGSSSTPGFGSSSSIFG--SAPGQGATP-AFGNSQPST 540
Query: 191 QPPSTGINFGTGTSAGLT 244
ST TG++ G T
Sbjct: 541 LFNSTPSTGQTGSAFGQT 558
Score = 33.1 bits (72), Expect = 0.21
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 22/106 (20%)
Frame = +2
Query: 2 TPSTQTTGL-SFGVSSTP---STQT--------SGLGFGVSSAPSTQATGL--------- 118
+PS T +FG S TP ST T SG FG S+ P+ A+G
Sbjct: 191 SPSFGATNTPAFGASPTPAFGSTGTTFGNTGFGSGGAFGASNTPAFGASGTPAFGASGTP 250
Query: 119 SFGVSSAPSTQATAL-SFGVSSATTQPPSTGINFGTGTSAGLTFGT 253
+FG SS P+ A++ +FG SS S+ +FG ++ +FG+
Sbjct: 251 AFGASSTPAFGASSTPAFGASSTPAFGGSSTPSFGASNTSSFSFGS 296
Score = 32.7 bits (71), Expect = 0.28
Identities = 28/81 (34%), Positives = 39/81 (48%)
Frame = +2
Query: 2 TPSTQTTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSS 181
TPST TG +FG + + Q FG SSAP+ FG +S + +T SS
Sbjct: 545 TPSTGQTGSAFGQTGSAFGQ-----FGQSSAPA-------FGQNSIFNKPSTGFGNMFSS 592
Query: 182 ATTQPPSTGINFGTGTSAGLT 244
++T S+ FG AG+T
Sbjct: 593 SSTLTTSSSSPFGQTMPAGVT 613
Score = 31.1 bits (67), Expect = 0.86
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 8 STQTTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSA---PSTQATALSFGVS 178
S+ G + G +TP+ S +S PST TG +FG + + Q++A +FG +
Sbjct: 517 SSSIFGSAPGQGATPAFGNSQPSTLFNSTPSTGQTGSAFGQTGSAFGQFGQSSAPAFGQN 576
Query: 179 SATTQPPSTGINFGTGTSAGLT 244
S + PSTG +S+ LT
Sbjct: 577 SIFNK-PSTGFGNMFSSSSTLT 597
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/71 (32%), Positives = 31/71 (43%)
Frame = +2
Query: 17 TTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQP 196
+TG+ FG T S S FG SS+P+ + +FG S A S + FG
Sbjct: 60 STGV-FGAPQTSSPFASTPTFGASSSPAFGNSTPAFGASPASSPFGGSSGFGQKPLGFST 118
Query: 197 PSTGINFGTGT 229
P + FG T
Sbjct: 119 PQSN-PFGNST 128
>At1g59660.1 68414.m06710 nucleoporin family protein contains Pfam
profiles: PF04096 nucleoporin autopeptidase, PF03093
nucleoporin FG repeat family
Length = 997
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 TPSTQTTGL-SFGVSSTPST-QTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGV 175
TP+ +T +FG SSTP +S FG S AP+ ++G +FG ++ S A FG
Sbjct: 201 TPAFGSTNTPAFGASSTPLFGSSSSPAFGASPAPAFGSSGNAFGNNTFSSGGA----FGS 256
Query: 176 SSATTQPPSTGINFGTGTSAGLTFGT 253
SS T S FG +S FG+
Sbjct: 257 SSTPTFGASNTSAFGASSSPSFNFGS 282
Score = 32.7 bits (71), Expect = 0.28
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +2
Query: 29 SFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSS--APSTQATALSFGVSSATTQPP- 199
+FG SSTPS +S FG +S ++ GLS SS +TQ + +FG S+ + P
Sbjct: 89 AFGASSTPSFGSSNSPFGGTSTFGQKSFGLSTPQSSPFGSTTQQSQPAFGNSTFGSSTPF 148
Query: 200 --STGINFGTGTS 232
ST FG ++
Sbjct: 149 GASTTPAFGASST 161
Score = 31.9 bits (69), Expect = 0.49
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Frame = +2
Query: 2 TPSTQTTGLSFGVSSTPSTQTSGLG------FGVSSAPSTQATGLSFGVSSAPSTQATAL 163
TPS ++ FG +ST ++ GL FG ++ S A G S SS P +T
Sbjct: 95 TPSFGSSNSPFGGTSTFGQKSFGLSTPQSSPFGSTTQQSQPAFGNSTFGSSTPFGASTTP 154
Query: 164 SFGVSSATTQPPSTGINFGTGTSAG 238
+FG SS S FG + G
Sbjct: 155 AFGASSTPAFGVSNTSGFGATNTPG 179
Score = 31.5 bits (68), Expect = 0.65
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Frame = +2
Query: 8 STQTTGLSFGVSSTPSTQTSGLG-FGVSSAPS-----TQATGLS---FGVSSAPSTQ--- 151
+T ++G +FG SSTP+ S FG SS+PS + A G S FG SS STQ
Sbjct: 246 NTFSSGGAFGSSSTPTFGASNTSAFGASSSPSFNFGSSPAFGQSTSAFGSSSFGSTQSSL 305
Query: 152 -ATALSFGVSSATTQPPSTGINFGTGTSAGLTFGTK 256
+T FG A + G G T G G++
Sbjct: 306 GSTPSPFGAQGAQASTSTFG---GQSTIGGQQGGSR 338
Score = 27.9 bits (59), Expect = 8.0
Identities = 25/77 (32%), Positives = 32/77 (41%)
Frame = +2
Query: 20 TGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPP 199
T FG + T S+ G GV AP T + FG S +T +FG SS +
Sbjct: 46 TSTPFG-AQTGSSMFGGTSTGVFGAPQTSS---PFGASPQAFGSSTQ-AFGASSTPSFGS 100
Query: 200 STGINFGTGTSAGLTFG 250
S GT T +FG
Sbjct: 101 SNSPFGGTSTFGQKSFG 117
>At3g10650.1 68416.m01281 expressed protein
Length = 1309
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/79 (32%), Positives = 38/79 (48%)
Frame = +2
Query: 14 QTTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQ 193
Q+TG+ FG S + G FG SS S +SAP + +L FGV+S++T
Sbjct: 877 QSTGIVFGAKSAENKSRPGFVFGSSSVVGGSTLNPSTAAASAPESSG-SLIFGVTSSST- 934
Query: 194 PPSTGINFGTGTSAGLTFG 250
P T + + +SA G
Sbjct: 935 -PGTETSKISASSAATNTG 952
Score = 35.5 bits (78), Expect = 0.040
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 TPSTQTTGLSFGVSSTPSTQTSGLGFGVS-SAP-STQATGLSFGVSSAPSTQATALSFGV 175
TP +T S +S+ ST +S L FG S AP S+ +G F S S+ T SFG
Sbjct: 1068 TPQLSSTNSS---ASSSSTMSSPL-FGTSWQAPNSSPNSGPVFSSSFTTSSTPTTFSFGG 1123
Query: 176 SSATTQPPSTGINFGTGTS 232
SSA T +T FG T+
Sbjct: 1124 SSAATVSSTTTPIFGASTN 1142
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +2
Query: 62 TSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSS---ATTQPPSTGINFGTGTS 232
TS FG A + Q+TG+ FG SA + FG SS +T PST +S
Sbjct: 864 TSTFKFG-GMASADQSTGIVFGAKSAENKSRPGFVFGSSSVVGGSTLNPSTAAASAPESS 922
Query: 233 AGLTFG 250
L FG
Sbjct: 923 GSLIFG 928
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/81 (27%), Positives = 35/81 (43%)
Frame = +2
Query: 8 STQTTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSAT 187
S+ +G F S T S+ + FG SSA + +T +S +T + + FG S
Sbjct: 1098 SSPNSGPVFSSSFTTSSTPTTFSFGGSSAATVSSTTTPIFGASTNNTPSPSPIFGFGSTP 1157
Query: 188 TQPPSTGINFGTGTSAGLTFG 250
P + +GT + FG
Sbjct: 1158 PTTPQQPVFGNSGTPSQSLFG 1178
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 TPSTQTTGLSFGVSSTPSTQTSGLGFGVSS-APSTQATGLSFGVSSAPSTQATALSFGVS 178
TP T+T+ +S +S+ +T T FG SS A ++ + + GVS++ + + S
Sbjct: 934 TPGTETSKIS---ASSAATNTGNSVFGTSSFAFTSSGSSMVGGVSASTGSSVFGFNAVSS 990
Query: 179 SATTQPPSTGIN-FGTGTS 232
++ T S N FG G +
Sbjct: 991 ASATSSQSQASNLFGAGNA 1009
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 26 LSFGVSST--PSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPP 199
L FGV+S+ P T+TS + +S+ +T FG SS T + + G SA+T
Sbjct: 925 LIFGVTSSSTPGTETSKIS---ASSAATNTGNSVFGTSSFAFTSSGSSMVGGVSASTGSS 981
Query: 200 STGINFGTGTSA 235
G N + SA
Sbjct: 982 VFGFNAVSSASA 993
>At2g28670.1 68415.m03485 disease resistance-responsive family
protein / fibroin-related contains similarity to silk
fibroin heavy chain [Bombyx mori] gi|765323|gb|AAB31861;
contains disease resistance response protien domain
Pfam:FP03018
Length = 447
Score = 37.1 bits (82), Expect = 0.013
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +2
Query: 17 TTGLSFGVSSTPS---TQTSGLGFGVSSAPST-QATGLSFGVSSAPSTQATALSFGVSSA 184
+TG FG S S + SGLG G S PS+ GL SS P + A G S
Sbjct: 60 STGFGFGAGSGSSGSGSTGSGLGAGTGSIPSSGSGPGLLPTASSVPGSLAGG---GSGSL 116
Query: 185 TTQPPSTGINFGTGTSAG 238
T +TG GTG++ G
Sbjct: 117 PTTGSATGAGAGTGSALG 134
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 53 STQTSGLGFGVSSAPSTQATGLSFGVSSAPS-TQATALSFGVSSATTQPPSTGINFGTGT 229
S T+ LG G S TG+ FG + S + +T FG S ++ STG G GT
Sbjct: 32 SATTTTLGSGSGS------TGIGFGAGTGSSGSGSTGFGFGAGSGSSGSGSTGSGLGAGT 85
Query: 230 SA 235
+
Sbjct: 86 GS 87
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 33.5 bits (73), Expect = 0.16
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +2
Query: 2 TPSTQTTGLSFG----VSSTPSTQTS-GLGFGVSSAPSTQATGLSFGVSSAPSTQATALS 166
TP +++T LS +S P+T T+ G S PST S+ P +++TA S
Sbjct: 236 TPMSRSTSLSSSRLTPTASKPTTSTARSAGSVTRSTPSTTTKSAGPSRSTTPLSRSTARS 295
Query: 167 FGVSSATTQPPSTGIN 214
+S T PPS I+
Sbjct: 296 STPTSRPTLPPSKTIS 311
>At3g51120.1 68416.m05598 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 1230
Score = 31.9 bits (69), Expect = 0.49
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +3
Query: 513 DTLLIANGEKIVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQ-LLQENND 689
D L A + + +NEA+E E L H D + K+LE L P E+Q LLQE +
Sbjct: 511 DILKTAATLQAMRINEALEA---EILKLNHLRD----RAKKLELLKSPEERQRLLQEVPE 563
Query: 690 RIKDPEREHMYSLAENFGFST 752
DP + ++L+E+ G T
Sbjct: 564 VHTDPSMDPSHALSEDAGLGT 584
>At1g69295.1 68414.m07947 beta-1,3-glucanase-related low similarity
to elicitor inducible beta-1,3-glucanase NtEIG-E76
[Nicotiana tabacum] GI:11071974
Length = 222
Score = 31.1 bits (67), Expect = 0.86
Identities = 21/81 (25%), Positives = 35/81 (43%)
Frame = +2
Query: 2 TPSTQTTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSS 181
TP+T T S TP+T T G + P++ F + P+ T + G+ +
Sbjct: 111 TPTTGTPTTGTPTSGTPTTGTPTTGTPTTGTPTSGTPTSGFPNTGTPN---TGTNTGMPN 167
Query: 182 ATTQPPSTGINFGTGTSAGLT 244
+ P S+ + GT+ G T
Sbjct: 168 SNGMPTSSSSSVFPGTTLGPT 188
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 PSTQTTGLSFGVSS-TPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSS 181
PST + L+ SS TP+T T G S P+T + P++ F
Sbjct: 96 PSTASNCLTGSSSSGTPTTGTPTTGTPTSGTPTTGTPTTGTPTTGTPTSGTPTSGF---- 151
Query: 182 ATTQPPSTGINFGTGTSAGL 241
T P+TG N G S G+
Sbjct: 152 PNTGTPNTGTNTGMPNSNGM 171
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 31.1 bits (67), Expect = 0.86
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +3
Query: 537 EKIVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQLLQENNDRIKDPE-RE 713
EK+ + A+E + + E +LD L KE E L EK+L EN ++D E
Sbjct: 401 EKLAKREAALEKKEEGVKKKEKDLDARLKTVKEKEKALKAEEKKLHMENERLLEDKECLR 460
Query: 714 HMYSLAENFGFSTT 755
+ E G TT
Sbjct: 461 KLKDEIEEIGTETT 474
>At5g40390.1 68418.m04899 raffinose synthase family protein similar
to galactinol-raffinose galactosyltransferase [Vigna
angularis] GI:6634701, seed imbibition protein
GB:AAA32975 GI:167100 from [Hordeum vulgare]; contains
Pfam profile PF05691: Raffinose synthase or seed
imbibition protein Sip1
Length = 783
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = -3
Query: 625 CASTKSNSCSSDCCSFLTVSTASFS---STIFSPFAISNVSQ 509
C T+ N C S+C + LT +T+ ++ SP +I+NV +
Sbjct: 614 CRETRRNQCFSECVNTLTATTSPKDVEWNSGSSPISIANVEE 655
>At1g35680.1 68414.m04436 50S ribosomal protein L21, chloroplast /
CL21 (RPL21) identical to 50S ribosomal protein L21,
chloroplast precursor (CL21) [Arabidopsis thaliana]
SWISS-PROT:P51412
Length = 220
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = -3
Query: 688 SLFSCSNCFSIGPNRSSNSFCCASTKSNSCSSDCCSFLTVSTASFSSTIFS 536
S FS ++C ++ RSS C S S + + FL+ STAS S T F+
Sbjct: 12 STFS-AHC-NVNSRRSSTILCSLSKPSLNLAKPLTGFLSPSTASTSRTAFT 60
>At2g24310.1 68415.m02906 expressed protein
Length = 322
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +2
Query: 38 VSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPP 199
VSS+PS + S+ S+ +T + VS++PS A ++S+++ P
Sbjct: 121 VSSSPSLPAENVRVSESNLKSSSSTAKTTPVSASPSVNARVSESNLNSSSSTTP 174
>At1g75090.1 68414.m08721 methyladenine glycosylase family protein
similar to SP|P05100 DNA-3-methyladenine glycosylase I
(EC 3.2.2.20) (3-methyladenine-DNA glycosylase I,
constitutive) {Escherichia coli}; contains Pfam profile
PF03352: Methyladenine glycosylase
Length = 329
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 17 TTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATT 190
+TG F V+ T T+ L V+ +P+T+ +F VS+ S+ +++ S S TT
Sbjct: 23 STGNRFKVTKTEMTKKPQLNPRVTKSPATKKPDSNFSVSTDDSSSSSSSSERSSVNTT 80
>At1g60670.1 68414.m06830 expressed protein contains similarity to
D-ala,D-ala ligase GI:6634594 from [Streptococcus
pneumoniae]
Length = 254
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +2
Query: 5 PSTQTTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSA 139
PST TTGL F S S+ + GF ++ T TGL S A
Sbjct: 10 PSTSTTGLVF---SATSSMNASSGFHLTVNSPTSVTGLKHEASLA 51
>At1g21810.1 68414.m02729 expressed protein
Length = 628
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +3
Query: 549 ELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPM--EKQLLQENNDRIKDPERE 713
+L V+ + ++ L E++ V+ + ELED+L + EK L+ + D +KD +E
Sbjct: 285 DLEREVKCCREAEKRLSLEIEAVVGDKMELEDMLKRVEAEKAELKTSFDVLKDKYQE 341
>At5g27330.1 68418.m03263 expressed protein
Length = 628
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +3
Query: 522 LIANGEKIVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPM--EKQLLQENNDRI 695
++A EK+V L + E E + ++ E ++ ++KELE+ + EK +LQ++ +
Sbjct: 454 MVALKEKVVALEKTNEATGKELEKIKAERGRLIKEKKELENRSESLRNEKAILQKDIVEL 513
Query: 696 K 698
K
Sbjct: 514 K 514
>At4g38410.1 68417.m05429 dehydrin, putative similar to dehydrin
ERD10 (Low-temperature-induced protein LTI45)
[Arabidopsis thaliana] SWISS-PROT:P42759
Length = 163
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 597 EHELDFVLAQQKELEDLLGPMEKQLLQENNDRI-KDPEREHMYSLAENFGFSTTSDAEDF 773
+ E D ++ + D L + + N R+ K+P+ E SLAE F S +S +++
Sbjct: 10 QQEADAAASKGCGMFDFLKKKPEDVHSSENARVTKEPKEEEKPSLAERFHLSDSSSSDEE 69
Query: 774 EG 779
G
Sbjct: 70 AG 71
>At4g23750.2 68417.m03417 AP2 domain-containing transcription
factor, putative DNA-binding protein Pti6 - Lycopersicon
esculentum,PID:g2213785
Length = 343
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -3
Query: 649 NRSSNSFCCASTKSNSCSSDC-CSFLTVSTASFSSTIFSPFAISNVS 512
N+S S +S+ S S S+DC CS ++V + F+ FS + S V+
Sbjct: 203 NKSKKSVTASSSISRSSSNDCLCSPVSVLRSPFAVDEFSGISSSPVA 249
>At4g23750.1 68417.m03416 AP2 domain-containing transcription
factor, putative DNA-binding protein Pti6 - Lycopersicon
esculentum,PID:g2213785
Length = 343
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -3
Query: 649 NRSSNSFCCASTKSNSCSSDC-CSFLTVSTASFSSTIFSPFAISNVS 512
N+S S +S+ S S S+DC CS ++V + F+ FS + S V+
Sbjct: 203 NKSKKSVTASSSISRSSSNDCLCSPVSVLRSPFAVDEFSGISSSPVA 249
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +2
Query: 2 TPSTQTTGLSFGVSSTPSTQTSGLGFGVSSAPSTQATG 115
TPST T + TPST T + APST A G
Sbjct: 282 TPSTPTPSTPTPSTPTPSTPTPSTPTPSTPAPSTPAAG 319
>At3g17205.1 68416.m02196 HECT-domain-containing protein /
ubiquitin-transferase family protein weak similarity to
ubiquitin-protein ligase 2 [Arabidopsis thaliana]
GI:7108523; contains Pfam profile PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 90 ELTPNPRPEVCVLGVELTPKLSPVVCVLG 4
+L PN + + CVL +E +P+ C+LG
Sbjct: 139 KLFPNLKVDTCVLPMETSPEFPGYACLLG 167
>At3g12930.1 68416.m01611 expressed protein contains Pfam domain
PF02410: Domain of unknown function DUF143
Length = 238
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 730 ASEYICSLSGSLIRSLFSCSNCFSIGPNRSSNSFCCASTKSNSCSSDCC 584
AS +++G+L+ F S+ P ++S+S C S + S +CC
Sbjct: 2 ASSTGLTVAGALLAGDFRLPAVSSLIPRKTSSSLSCLSNRDLSSPYNCC 50
>At2g22770.1 68415.m02701 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 314
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 131 SSAPSTQATALSFGVSSATTQPPSTGINFGTGTSAGLTFGTK 256
SS+ S + +SFG T P T +NF S G+K
Sbjct: 67 SSSGSRTSQVISFGSPDTKTNPVETSLNFSNQVSMDQKVGSK 108
>At1g33480.1 68414.m04144 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 508
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = +2
Query: 38 VSSTPSTQTSGLGFGVSSAPSTQATGLSFGVSSAPSTQATALSFGVSSATTQPPSTGINF 217
VSS P ++ VS+ P ++ S GVSS P +Q GVSS P IN
Sbjct: 168 VSSQPESEPVNHRV-VSTQPESEPVNHS-GVSSQPESQPVVNHRGVSSQPESQPVNHIND 225
Query: 218 G 220
G
Sbjct: 226 G 226
>At4g22240.1 68417.m03218 plastid-lipid associated protein PAP,
putative similar to plastid-lipid associated proteins
PAP2 [Brassica rapa] GI:14248550 GI:14248556; contains
Pfam profile PF04755: PAP_fibrillin
Length = 310
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -1
Query: 684 CSLAVTVSP-SVLIDLPILFVVPVQSLIHVPVIA 586
C V++SP S I P F+VPV S+IH P+I+
Sbjct: 12 CQTRVSISPNSKSISKPP-FLVPVTSIIHRPMIS 44
>At3g49520.1 68416.m05412 F-box family protein contains weak hit to
Pfam:PF00646 F-box domain and weak hit to TIGRFAM
TIGR01640 : F-box protein interaction domain
Length = 388
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 534 GEKIVELNEAVETVKNEQQSLEHELDFVLAQQKELEDLLGPMEKQLLQENND 689
G+K V N+ +E + + + D + ++ EDL+ P KQ+ NND
Sbjct: 44 GKKSVARNQFLELMILDSRVCSLRFDLQKIRNEDEEDLVDPSMKQISIPNND 95
>At1g66830.1 68414.m07596 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profiles: PF00069:
Eukaryotic protein kinase domain, multiple PF00560:
Leucine Rich Repeat
Length = 685
Score = 27.9 bits (59), Expect = 8.0
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +3
Query: 564 VETVKNEQQSLEHELDFVLAQQKELEDLLGPMEK---QLLQENNDRIKDPEREHMYSLAE 734
VE+ + + LD VLA+ ++LED + + K +Q+N D+ R HM S+ E
Sbjct: 622 VESASERNKPAWYVLDPVLARDRDLEDSMVQVIKIGLACVQKNPDK-----RPHMRSVLE 676
Query: 735 NFGFSTTS 758
+F TS
Sbjct: 677 SFEKLVTS 684
>At1g63540.1 68414.m07183 hydroxyproline-rich glycoprotein family
protein
Length = 635
Score = 27.9 bits (59), Expect = 8.0
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 18/99 (18%)
Frame = +2
Query: 8 STQTTGLSFGVSSTPSTQTSGLGF-----GVSSAPS-----TQATG---LSFGVS---SA 139
S+ + S +S+P +S LGF VSSAP+ TQA G +FG+S S
Sbjct: 180 SSSASATSSSSTSSPFHSSSLLGFAPAVTSVSSAPTPACGPTQAFGQPTQAFGLSMFGST 239
Query: 140 PSTQATALSFGVSSATTQP-PSTGINFGTGTSA-GLTFG 250
P + T F S++ P PS G G A G FG
Sbjct: 240 PRFEITGFPFQASASRNSPSPSFGPAHNCGKPAFGSPFG 278
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,073,069
Number of Sequences: 28952
Number of extensions: 332359
Number of successful extensions: 1460
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1755792000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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