Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120227.Seq
(564 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.4
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 2.4
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 23 2.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.4
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 2.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.4
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 23 2.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 4.2
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 5.5
DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein. 21 7.3
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 21 7.3
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.4
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +2
Query: 65 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 229
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.4
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +2
Query: 65 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 229
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 2.4
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +2
Query: 65 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 229
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 22.6 bits (46), Expect = 2.4
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = +3
Query: 360 QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPP 467
QG G H + ++ G E HL GH P
Sbjct: 379 QGYQGEHPNYNHYGYHYSGDGGEVAHLPNTHMGHEP 414
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.4
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +2
Query: 65 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 229
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 2.4
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +2
Query: 65 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 229
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 2.4
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +2
Query: 65 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 229
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 20 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 74
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 22.6 bits (46), Expect = 2.4
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +2
Query: 65 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 229
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.4
Identities = 12/55 (21%), Positives = 22/55 (40%)
Frame = +2
Query: 65 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 229
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 22.6 bits (46), Expect = 2.4
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = +3
Query: 360 QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPP 467
QG G H + ++ G E HL GH P
Sbjct: 327 QGYQGEHPNYNHYGYHYSGDGGEVAHLPNTHMGHEP 362
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.2
Identities = 12/55 (21%), Positives = 21/55 (38%)
Frame = +2
Query: 65 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 229
H + P Y + +R+A P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.4 bits (43), Expect = 5.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 450 RQGHPPHH 473
RQG PPHH
Sbjct: 57 RQGIPPHH 64
>DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein.
Length = 305
Score = 21.0 bits (42), Expect = 7.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 377 CPVESLMCTMSKEPGCLSRDTMVPTRPKLR 288
C V+S +K GC S ++ V T LR
Sbjct: 95 CSVKSESSQAAKYGGCFSGESTVLTSTGLR 124
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 81 RRLSTSCVKSSVWRPDLRMFR 143
R+++ C+KS WR L + +
Sbjct: 525 RKVTFQCLKSIAWRAFLAVLK 545
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,123
Number of Sequences: 336
Number of extensions: 3308
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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