Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120227.Seq
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal pro... 129 2e-30
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 39 0.003
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 31 0.57
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 30 1.3
U97189-1|AAC48164.1| 623|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 1.7
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 1.7
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 1.7
AL110490-13|CAB54454.1| 377|Caenorhabditis elegans Hypothetical... 29 2.3
AL110490-12|CAB54447.1| 326|Caenorhabditis elegans Hypothetical... 29 2.3
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 4.0
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 4.0
AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta... 28 4.0
Z81496-4|CAI79124.1| 77|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical pr... 27 7.0
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 27 7.0
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 27 7.0
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical pr... 27 9.3
AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical ... 27 9.3
AC006834-7|AAF40003.2| 176|Caenorhabditis elegans Lipid deplete... 27 9.3
>AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 4 protein.
Length = 259
Score = 129 bits (311), Expect = 2e-30
Identities = 59/84 (70%), Positives = 70/84 (83%)
Frame = +1
Query: 256 ESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAY 435
E GNL +TGGRN+GRVG I RER PG+ DI+HIKDS GH+FATR++NVF+IGKG KA
Sbjct: 175 EPGNLAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKAL 234
Query: 436 ISLPRGKGIRLTIAEERDKRIAAK 507
+SLP G GIRL+IAEERDKR+A K
Sbjct: 235 VSLPTGAGIRLSIAEERDKRMAQK 258
Score = 114 bits (274), Expect = 5e-26
Identities = 52/88 (59%), Positives = 64/88 (72%)
Frame = +2
Query: 2 SIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYP 181
+IE+TNE FR++YD KGR+ +HRI EA +KLCKVK V T K VP L T DGRTIRYP
Sbjct: 90 AIERTNEYFRMLYDTKGRYVVHRIQAAEADFKLCKVKSVRTVNKGVPVLTTTDGRTIRYP 149
Query: 182 DPLIKVNDSIQLDIATTKIMDFIKLSRG 265
DP +KVND+I +I+T KI D +K G
Sbjct: 150 DPHVKVNDTIVFNISTQKITDSVKFEPG 177
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +3
Query: 309 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHH 473
HH E H H G HGTH H GH G H A A GH HH
Sbjct: 525 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGHH 580
Score = 35.9 bits (79), Expect = 0.020
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +3
Query: 300 ACGHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGV-HLAAARQGHPPHH 473
A HH E H H G HGTH H GH G H A A GH H
Sbjct: 464 APAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGEH 522
Score = 35.5 bits (78), Expect = 0.027
Identities = 20/55 (36%), Positives = 22/55 (40%)
Frame = +3
Query: 309 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 473
HHR E AH G HGTH H E H+ H G H + H P H
Sbjct: 402 HHRHHGEHHGTHHSPAHHGEHGTHHGHHGEH--HHAPAHHGHHESHGHGHHSPAH 454
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +3
Query: 348 HCAHQGLHGTHLRHEVEQR-VHNRQGHEGVHLAAARQGHPPHH 473
H AH HG H RH E H+ H G H GH H
Sbjct: 392 HAAHHDEHGVHHRHHGEHHGTHHSPAHHGEH--GTHHGHHGEH 432
Score = 32.7 bits (71), Expect = 0.19
Identities = 23/64 (35%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = +3
Query: 279 HGRP*LGACGHHRVPRETSRLLRHCAHQGLHGTH--LRHEVEQRVHNRQGHE-GVHLAAA 449
HG G+ G H T L H H G HGTH H H+ HE G H A
Sbjct: 643 HGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAH-HGA 701
Query: 450 RQGH 461
GH
Sbjct: 702 HHGH 705
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Frame = +3
Query: 309 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQR----VHNRQGHEGVHLAAARQGHPPHH 473
HH E H H G HGTH H E H G G H H P H
Sbjct: 502 HHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAH 560
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +3
Query: 306 GHHRVPRETSRLLRHCAHQGLHGTHL-RHEVEQRVHNRQGHEGVHLAAARQGHPPHH 473
GHH H H G HG H H H+ GH G H H PHH
Sbjct: 588 GHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHH--GHHGAH-----HHHAPHH 637
Score = 30.7 bits (66), Expect = 0.76
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +3
Query: 309 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 473
HH P H G HG H H GH G H H P H
Sbjct: 631 HHHAPHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAH 685
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 3/58 (5%)
Frame = +3
Query: 309 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRV---HNRQGHEGVHLAAARQGHPPHH 473
HH P H +H HG H H H G GVH G+ HH
Sbjct: 567 HHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHH 624
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +3
Query: 306 GHHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVH 437
G H P H H HG H H ++ H+ GH H
Sbjct: 678 GAHHSPAHHGHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHSKH 721
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = +3
Query: 309 HHRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 473
HH E H H G HG+H H H GH H A A GH H
Sbjct: 560 HHGHHGEHHHAPAHHGHHGHHGSHGVHHGH---HESHGHG--HHAPAHHGHHGEH 609
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Frame = +3
Query: 354 AHQGLHGTHLRHEVEQRVHNRQG--HEGVHLAAARQGHPPHH 473
AH G HG H H H G H G H H HH
Sbjct: 622 AHHGHHGAHHHHAPHHEHHEHHGDHHHGSH-GVHHGHHGTHH 662
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Frame = +3
Query: 354 AHQGLHGTHLRHEVEQRVHNRQGHEGVHLA---AARQGH--PPHH 473
AH G HG H H G GVH + GH P HH
Sbjct: 559 AHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHH 603
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 31.1 bits (67), Expect = 0.57
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +3
Query: 348 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH--PPHH 473
HC G HG H R H G G R GH PPHH
Sbjct: 361 HCP--GRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHH 402
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +3
Query: 348 HC-AHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 473
HC G HG H + R +R GH H R PPHH
Sbjct: 389 HCPGRHGHHGPPHHHHHDGRSPSRHGHHHHHHHGCRP-FPPHH 430
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = -3
Query: 517 CAAPWLRCACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 377
C C C PR C CR C +C C TRC T R C
Sbjct: 79 CCGCGCGCCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119
>U97189-1|AAC48164.1| 623|Caenorhabditis elegans Hypothetical
protein C48B6.4 protein.
Length = 623
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Frame = +2
Query: 50 GRFTIHRITPEEAKYKLCKVKRVATGPKNVP-----YLVTHDGRTIR-YP 181
G+ + R+T E Y+ CK+++ A K VP Y+V H R I+ YP
Sbjct: 302 GQIIVRRLTDPEYPYRHCKIQKFAVRCKLVPENYGWYVVWHCQRDIQEYP 351
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 496 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 377
C C PR C CR C +C C TRC T R C
Sbjct: 84 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 117
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 496 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 377
C C PR C CR C +C C TRC T R C
Sbjct: 85 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = -3
Query: 496 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 377
C C PR C CR C +C C TRC T R C
Sbjct: 86 CCCCRPRCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 119
>AL110490-13|CAB54454.1| 377|Caenorhabditis elegans Hypothetical
protein Y48B6A.13b protein.
Length = 377
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 267 LVYDHGRP*LGACGHHRVPRETSRLLRH 350
LV+D GR +G+ R RETS+LL+H
Sbjct: 207 LVFDDGRKKVGSSEGMRRSRETSQLLKH 234
>AL110490-12|CAB54447.1| 326|Caenorhabditis elegans Hypothetical
protein Y48B6A.13a protein.
Length = 326
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 267 LVYDHGRP*LGACGHHRVPRETSRLLRH 350
LV+D GR +G+ R RETS+LL+H
Sbjct: 156 LVFDDGRKKVGSSEGMRRSRETSQLLKH 183
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -3
Query: 460 CPCRAAARCTPSCP-CRL*TRCS-TSWRRCVP 371
C C+ A C P CP + + CS T R C+P
Sbjct: 54 CSCQQAPICQPQCPRAEINSDCSATCVRACIP 85
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -3
Query: 496 CACPAPRRW*GGCPCRAAARCTPSCPCRL*TRCSTSWRRC 377
C C P+ C CR C +C C TRC T R C
Sbjct: 85 CCCCRPKCC---CCCRRCCTCCRTCCC---TRCCTCCRPC 118
>AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta
family protein 5 protein.
Length = 938
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -1
Query: 207 ESLTLISGSG*RMVRPSCVTKYGTFLGPVATRLTLHNLYLASSGVIRWIVNLPLT 43
E ++ + G V P C Y PVA + H Y A + ++R N P T
Sbjct: 868 EQASMYNAEG-EFVNPFCRLSYAPKQPPVAANIANHKAYFAQAVLVRGPGNCPET 921
>Z81496-4|CAI79124.1| 77|Caenorhabditis elegans Hypothetical
protein F09C6.13 protein.
Length = 77
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 250 QVESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIK 363
+V+SGN + T R++ R+ V E H D+ H++
Sbjct: 12 KVDSGNTTINTTNRSINRIDNSVDYESHGLDTDLEHLQ 49
>Z69885-4|CAA93757.1| 208|Caenorhabditis elegans Hypothetical
protein T04C10.4 protein.
Length = 208
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 166 HHPLSRPTYQSQRFHPVRHCNYEDYGLH 249
HH PTY F+P H +Y+ + L+
Sbjct: 32 HHHHQSPTYPQSYFNPYSHQSYQQHHLN 59
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 455 LPRGSEMYAFVPLPIMNTLFNLVAKVCPVESLMCTMSKE 339
L G+EM P + L ++ K P + LMC SKE
Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 455 LPRGSEMYAFVPLPIMNTLFNLVAKVCPVESLMCTMSKE 339
L G+EM P + L ++ K P + LMC SKE
Sbjct: 300 LDAGAEMINSEPTKVTQLLVDMELKWTPAQYLMCGTSKE 338
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 308 APSCPARDIPAPSTLCTSRTPRDTPSP 388
AP CP PAP+ C P TPSP
Sbjct: 107 APCCPPP--PAPAAPCCPPPPPPTPSP 131
>Z77664-2|CAB01217.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 113 RVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKLSR 262
R + P N + T T R P P+ ++ ++ ++ K MDF+ SR
Sbjct: 372 RTTSKPDNTFWHPTESFGTTRSPAPVSTIDSPLKPEVPVIKPMDFMVRSR 421
>Z73970-5|CAA98248.1| 643|Caenorhabditis elegans Hypothetical
protein C29A12.6 protein.
Length = 643
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 113 RVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKLSR 262
R + P N + T T R P P+ ++ ++ ++ K MDF+ SR
Sbjct: 372 RTTSKPDNTFWHPTESFGTTRSPAPVSTIDSPLKPEVPVIKPMDFMVRSR 421
>AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical
protein Y71A12B.4 protein.
Length = 1913
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 333 SRLLRHCA--HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGH 461
S LL CA H G+ L+H V + G +HLAA GH
Sbjct: 842 SPLLEACARGHSGVANILLKHHARIDVFDEMGRTALHLAAF-NGH 885
>AC006834-7|AAF40003.2| 176|Caenorhabditis elegans Lipid depleted
protein 5 protein.
Length = 176
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +2
Query: 116 VATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 244
++TG N+P +HD + + D L K + + +++ + MD
Sbjct: 20 LSTGKDNLPVTRSHDAKKVELNDILDKPSQKTPVKVSSDETMD 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,494,220
Number of Sequences: 27780
Number of extensions: 311806
Number of successful extensions: 972
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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