Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120226.Seq
         (859 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.      31   4.1  
L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote...    31   4.1  

>X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.
          Length = 1411

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
 Frame = +1

Query: 460  SSKRHVDEQRQPNKSQQTNQFLELSNVMTGVRNQ-NVQLLAALETAKDVILTRLNTLLSE 636
            +SK   +++ Q  K+      L+L      +++Q  VQ+   L+  K+     L   L +
Sbjct: 871  NSKSEFEKENQKGKAA----ILDLEKTCKELKHQLQVQMENTLKEQKE-----LKKSLEK 921

Query: 637  ITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNE--LNNTNSILTFSVEHHKHQWYAQQ 804
              ++   L L L+ + EQL++A NT++Q ++ E  L    + L  S E  K Q  A Q
Sbjct: 922  EKEASHQLKLELNSMQEQLIQAQNTLKQNEKEEQQLQGNINELKQSSEQKKKQIEALQ 979


>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
            protein.
          Length = 1410

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
 Frame = +1

Query: 460  SSKRHVDEQRQPNKSQQTNQFLELSNVMTGVRNQ-NVQLLAALETAKDVILTRLNTLLSE 636
            +SK   +++ Q  K+      L+L      +++Q  VQ+   L+  K+     L   L +
Sbjct: 871  NSKSEFEKENQKGKAA----ILDLEKTCKELKHQLQVQMENTLKEQKE-----LKKSLEK 921

Query: 637  ITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNE--LNNTNSILTFSVEHHKHQWYAQQ 804
              ++   L L L+ + EQL++A NT++Q ++ E  L    + L  S E  K Q  A Q
Sbjct: 922  EKEASHQLKLELNSMQEQLIQAQNTLKQNEKEEQQLQGNINELKQSSEQKKKQIEALQ 979


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,416,315
Number of Sequences: 237096
Number of extensions: 1869786
Number of successful extensions: 4294
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4294
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)