Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120226.Seq
         (859 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095510-1|AAM12244.1| 1050|Drosophila melanogaster AT12601p pro...    31   1.5  
AE014296-147|AAF47422.2| 1978|Drosophila melanogaster CG13889-PA...    31   1.5  
BT016098-1|AAV36983.1| 1873|Drosophila melanogaster LD34837p pro...    31   2.7  
AE014296-2298|AAF49803.3| 1873|Drosophila melanogaster CG17689-P...    31   2.7  

>AY095510-1|AAM12244.1| 1050|Drosophila melanogaster AT12601p
           protein.
          Length = 1050

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
 Frame = +1

Query: 460 SSKRHVDEQRQPNKSQQTNQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEI 639
           S K   D   + +K +Q  Q ++  N       + ++ L     A+   +      L  I
Sbjct: 128 SDKDSSDPLSELDKQEQLLQNIDSKNKHIKRLLKEIETLQNQNIAQSKTIVLHERELQTI 187

Query: 640 TDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNNTNSILTF-SVEHHKHQWYAQQFADR 816
             +L  L+  + K+ EQ  +++   +Q Q  E+      LTF  VE  K +   +QF D+
Sbjct: 188 KANLVQLSQDITKV-EQERKSLKQKEQQQALEITRLEGNLTFLEVEREKQEVEMRQFLDK 246

Query: 817 YRKLS 831
           Y   S
Sbjct: 247 YEAKS 251


>AE014296-147|AAF47422.2| 1978|Drosophila melanogaster CG13889-PA
           protein.
          Length = 1978

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
 Frame = +1

Query: 460 SSKRHVDEQRQPNKSQQTNQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEI 639
           S K   D   + +K +Q  Q ++  N       + ++ L     A+   +      L  I
Sbjct: 128 SDKDSSDPLSELDKQEQLLQNIDSKNKHIKRLLKEIETLQNQNIAQSKTIVLHERELQTI 187

Query: 640 TDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNNTNSILTF-SVEHHKHQWYAQQFADR 816
             +L  L+  + K+ EQ  +++   +Q Q  E+      LTF  VE  K +   +QF D+
Sbjct: 188 KANLVQLSQDITKV-EQERKSLKQKEQQQALEITRLEGNLTFLEVEREKQEVEMRQFLDK 246

Query: 817 YRKLS 831
           Y   S
Sbjct: 247 YEAKS 251


>BT016098-1|AAV36983.1| 1873|Drosophila melanogaster LD34837p protein.
          Length = 1873

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
 Frame = +1

Query: 418  ARTATNIRRAGKNSSSKRHVDEQRQPNKSQQTNQFLELSNVMTGVRNQNVQLLAALETAK 597
            + T+T   +   ++ S   V +Q+   +SQQ  Q L+ S    G+  Q   +    +  K
Sbjct: 954  SNTSTTTHQVSLSNGSLVLVQQQQPQQQSQQLAQALQHS----GITIQPATIQQQQQQVK 1009

Query: 598  DVILTRLNTLL-SEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNNTNS 753
               +   N+ L +++  ++P L   L    +Q+++     QQT     NN N+
Sbjct: 1010 GTSVVGANSALRAQLNSNVPILQTQLKVQQQQIMQK-QQQQQTTATSNNNNNN 1061


>AE014296-2298|AAF49803.3| 1873|Drosophila melanogaster CG17689-PA,
            isoform A protein.
          Length = 1873

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
 Frame = +1

Query: 418  ARTATNIRRAGKNSSSKRHVDEQRQPNKSQQTNQFLELSNVMTGVRNQNVQLLAALETAK 597
            + T+T   +   ++ S   V +Q+   +SQQ  Q L+ S    G+  Q   +    +  K
Sbjct: 954  SNTSTTTHQVSLSNGSLVLVQQQQPQQQSQQLAQALQHS----GITIQPATIQQQQQQVK 1009

Query: 598  DVILTRLNTLL-SEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELNNTNS 753
               +   N+ L +++  ++P L   L    +Q+++     QQT     NN N+
Sbjct: 1010 GTSVVGANSALRAQLNSNVPILQTQLKVQQQQIMQK-QQQQQTTATSNNNNNN 1061


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,774,002
Number of Sequences: 53049
Number of extensions: 644587
Number of successful extensions: 2418
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2279
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)