Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120222.Seq
         (736 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   2.4  
AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding pr...    25   3.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.2  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       24   4.2  
AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.        24   4.2  
AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.        24   4.2  
AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1 ...    23   9.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.8  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 18/76 (23%), Positives = 29/76 (38%)
 Frame = -3

Query: 425 LGQLRRFRRAFSQSCRAVSASRRATIISLANKMSDRLASAKSALATVNFCVRSSILA*HH 246
           L +L   RR   Q     SA+ +  ++   N + D +      +A        S+L  HH
Sbjct: 348 LPKLLVMRRPIYQPLHHFSAASQRFMLRSCNSLGDHIPPLPPTIA-----FDPSVLLDHH 402

Query: 245 LYPFQRPARTCAVHST 198
           L        TC +H +
Sbjct: 403 LLDSSESLNTCRLHGS 418


>AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP24 protein.
          Length = 176

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 295 NADLAEANRSLILFANEMIVARRDAETARQDCENAR 402
           NAD  +   SL +F + +  AR +AE  R+  +NAR
Sbjct: 26  NADNFKLYSSLFVFPSPLQGARLEAEHVRRIHQNAR 61


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 10/43 (23%), Positives = 21/43 (48%)
 Frame = -2

Query: 432 HAVGPAAPFPARVFAILPSRFSVASSHNHFVGKQNERSVGFRQ 304
           H + P+ P+P  ++ +LP    + S H     ++  R+   R+
Sbjct: 413 HPLYPSLPYPPNLYGMLPG-MGMQSIHERMKLEEEHRAARLRE 454


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 595 LKMTSLEPNRFRLRPSDRFC 536
           + +TSL    F LRPS+R C
Sbjct: 1   MSVTSLVDGEFLLRPSNRAC 20


>AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 531 RPQKRSLGRSLKRLGSNDVIFSSDYVPNS 617
           + Q +   R LK+LGSN + F+ +  PN+
Sbjct: 95  KEQTKLQERLLKKLGSNAIPFTFNISPNA 123


>AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 531 RPQKRSLGRSLKRLGSNDVIFSSDYVPNS 617
           + Q +   R LK+LGSN + F+ +  PN+
Sbjct: 95  KEQTKLQERLLKKLGSNAIPFTFNISPNA 123


>AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1
           protein.
          Length = 45

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 470 TRSCATAWPCATWQQRVCVSAPAKTIAG 553
           T  C +  PCAT  +  C S   K  +G
Sbjct: 13  TSGCGSGQPCATDCKCACASGGCKEKSG 40


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +1

Query: 424 NRMADIAQDVIAKPSNPQ 477
           NR+ DI+++  A PS+P+
Sbjct: 410 NRLRDISEETSALPSHPR 427


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 837,878
Number of Sequences: 2352
Number of extensions: 18197
Number of successful extensions: 41
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)