Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120222.Seq
         (736 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023906-1|ABA81840.1|  914|Drosophila melanogaster GH18655p pro...    29   5.0  
AJ006524-1|CAA07085.1|  914|Drosophila melanogaster coatomer, be...    29   5.0  
AJ006523-1|CAA07084.1|  914|Drosophila melanogaster coatomer, be...    29   5.0  
AE014134-2340|AAF53294.2|  914|Drosophila melanogaster CG6699-PA...    29   5.0  
AB043038-1|BAB32536.1|  195|Drosophila melanogaster alpha-amylas...    29   5.0  
X67704-2|CAA47942.1|  265|Drosophila melanogaster sperm protein ...    29   8.7  
AY118617-1|AAM49986.1|  265|Drosophila melanogaster LP10995p pro...    29   8.7  
AE014297-4222|AAF56780.1|  265|Drosophila melanogaster CG18396-P...    29   8.7  
AE014296-3525|AAF51714.1|  263|Drosophila melanogaster CG12971-P...    29   8.7  

>BT023906-1|ABA81840.1|  914|Drosophila melanogaster GH18655p
           protein.
          Length = 914

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +1

Query: 469 NPQLCHSLAVCDVATTSLRFCARKN 543
           N Q+     VCDV   S RF ARKN
Sbjct: 46  NQQMVKDFEVCDVPVRSARFVARKN 70


>AJ006524-1|CAA07085.1|  914|Drosophila melanogaster coatomer,
           beta-prime subunit protein.
          Length = 914

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +1

Query: 469 NPQLCHSLAVCDVATTSLRFCARKN 543
           N Q+     VCDV   S RF ARKN
Sbjct: 46  NQQMVKDFEVCDVPVRSARFVARKN 70


>AJ006523-1|CAA07084.1|  914|Drosophila melanogaster coatomer,
           beta-prime subunit protein.
          Length = 914

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +1

Query: 469 NPQLCHSLAVCDVATTSLRFCARKN 543
           N Q+     VCDV   S RF ARKN
Sbjct: 46  NQQMVKDFEVCDVPVRSARFVARKN 70


>AE014134-2340|AAF53294.2|  914|Drosophila melanogaster CG6699-PA
           protein.
          Length = 914

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +1

Query: 469 NPQLCHSLAVCDVATTSLRFCARKN 543
           N Q+     VCDV   S RF ARKN
Sbjct: 46  NQQMVKDFEVCDVPVRSARFVARKN 70


>AB043038-1|BAB32536.1|  195|Drosophila melanogaster alpha-amylase
           protein.
          Length = 195

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
 Frame = +2

Query: 386 IAKTRAGNGAAG-----PTAWRTLRKT**PNPATRSCATAWPCA-TW 508
           +  +R GNG        PT+WR   +T   +PA  S AT   CA TW
Sbjct: 68  VKDSRVGNGGGNVTNPSPTSWRPAPETRSSSPAWSSAATPSECAPTW 114


>X67704-2|CAA47942.1|  265|Drosophila melanogaster sperm protein
           protein.
          Length = 265

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = -1

Query: 493 PGCGTAAGCWVWLSRLAQCPPCG 425
           PGCG    C  W      C PCG
Sbjct: 212 PGCGPCGPCGPWGPGCGPCGPCG 234


>AY118617-1|AAM49986.1|  265|Drosophila melanogaster LP10995p
           protein.
          Length = 265

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = -1

Query: 493 PGCGTAAGCWVWLSRLAQCPPCG 425
           PGCG    C  W      C PCG
Sbjct: 212 PGCGPCGPCGPWGPGCGPCGPCG 234


>AE014297-4222|AAF56780.1|  265|Drosophila melanogaster CG18396-PA
           protein.
          Length = 265

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = -1

Query: 493 PGCGTAAGCWVWLSRLAQCPPCG 425
           PGCG    C  W      C PCG
Sbjct: 212 PGCGPCGPCGPWGPGCGPCGPCG 234


>AE014296-3525|AAF51714.1|  263|Drosophila melanogaster CG12971-PA
           protein.
          Length = 263

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = +3

Query: 402 PETAQLAQPHGGHCARRDSQTQQPAAVPQPGRVRRGNNEFAFLRPQKRSLGRSLKRLGSN 581
           P T+ L  PH  H      + Q+   +P+     R  NE   + P   SL      +   
Sbjct: 61  PSTSYLPPPHPEHAVSMSIEQQELRELPEQVEYMR-PNEQGQMEPMPSSLLTPPAAVDEQ 119

Query: 582 DVIFSSDYVP 611
           +V+ SS Y+P
Sbjct: 120 EVMPSSRYLP 129


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,439,648
Number of Sequences: 53049
Number of extensions: 827596
Number of successful extensions: 3229
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3228
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)