Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120222.Seq
(736 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 31 1.1
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 31 1.1
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 31 1.1
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 31 1.1
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 31 1.1
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 31 1.1
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 30 2.0
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 30 2.0
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 29 2.6
L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical p... 29 2.6
Z73910-4|CAA98136.1| 662|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 6.0
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 6.0
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 6.0
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 6.0
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 259 KIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 372
KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4829 KIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 259 KIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 372
KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4189 KIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4226
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 259 KIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 372
KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4829 KIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 259 KIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 372
KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4829 KIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 259 KIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 372
KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4189 KIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4226
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 259 KIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAE 372
KIDD T +L + +ADL +A + NE A+ DA+
Sbjct: 4829 KIDDTTYRLIIPSADLKDAGEYTVEVINESGKAKSDAK 4866
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +1
Query: 268 DLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRKRRSWPNRMADIAQ 447
DL +++ A + ANR + F+NE+ A+R AE ++ +N ++ + + +
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKE 1361
Query: 448 DV 453
+
Sbjct: 1362 SI 1363
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +1
Query: 268 DLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRKRRSWPNRMADIAQ 447
DL +++ A + ANR + F+NE+ A+R AE ++ +N ++ + + +
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKE 1361
Query: 448 DV 453
+
Sbjct: 1362 SI 1363
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +1
Query: 268 DLTQKLTVANADLAEANRSLILFANEMIVARRDAETARQDCENARRKRRSWPNRMADIAQ 447
DL +++ A + ANR + F+NE+ A+R AE ++ +N ++ + + +
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKE 1361
Query: 448 DV 453
+
Sbjct: 1362 SI 1363
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical
protein F40F11.2b protein.
Length = 1607
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 256 AKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETAR--QDCENARRKRRSWPNR 429
A+I + K +A+ A N L N + + +A+ Q + A KR++ PN
Sbjct: 293 AEIAQVFTKNMAMSANDAPGNSILSQIQNLTSIGSSASSSAQPSQPAKKAAPKRKTVPNT 352
Query: 430 MADIAQDVIAKPSNPQLCHSLAVCDVATTSL 522
++AQ+ P Q+ + V D TT++
Sbjct: 353 AKNLAQNQQIMPPQAQITPTKLVMDPPTTTM 383
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical
protein F40F11.2a protein.
Length = 1593
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 256 AKIDDLTQKLTVANADLAEANRSLILFANEMIVARRDAETAR--QDCENARRKRRSWPNR 429
A+I + K +A+ A N L N + + +A+ Q + A KR++ PN
Sbjct: 279 AEIAQVFTKNMAMSANDAPGNSILSQIQNLTSIGSSASSSAQPSQPAKKAAPKRKTVPNT 338
Query: 430 MADIAQDVIAKPSNPQLCHSLAVCDVATTSL 522
++AQ+ P Q+ + V D TT++
Sbjct: 339 AKNLAQNQQIMPPQAQITPTKLVMDPPTTTM 369
>L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical
protein C02F5.3 protein.
Length = 366
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 546 IVFAGAETQTRCCHVAHGQAVAQLRVA 466
I+ G T CCH H AQLR A
Sbjct: 309 IILRGGATIEHCCHALHRSIAAQLRYA 335
>Z73910-4|CAA98136.1| 662|Caenorhabditis elegans Hypothetical
protein M117.4 protein.
Length = 662
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 381 ARLRKRAPETAQLAQPHGGHC-ARRDSQTQQPAAVPQPGRVRRGNNEFAFLRPQKRSLGR 557
A +K + E A + G +RR S+ Q+ + QP + G++ A+L+P + R
Sbjct: 242 AGTKKGSTEDASTDNLNNGKVQSRRKSKRQKKSIFQQPVQRTPGSHPSAYLQPTRARTER 301
Query: 558 SLK 566
SLK
Sbjct: 302 SLK 304
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 307 AEANRSLILFANEMIVARRDAETARQDCENARRKRRSWPNRMADIAQD 450
AEA R A+ DAE AR++ E A R+RR R A+D
Sbjct: 1390 AEARRRAKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED 1437
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 307 AEANRSLILFANEMIVARRDAETARQDCENARRKRRSWPNRMADIAQD 450
AEA R A+ DAE AR++ E A R+RR R A+D
Sbjct: 1402 AEARRRAKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED 1449
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 307 AEANRSLILFANEMIVARRDAETARQDCENARRKRRSWPNRMADIAQD 450
AEA R A+ DAE AR++ E A R+RR R A+D
Sbjct: 1289 AEARRRAKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED 1336
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 307 AEANRSLILFANEMIVARRDAETARQDCENARRKRRSWPNRMADIAQD 450
AEA R A+ DAE AR++ E A R+RR R A+D
Sbjct: 1371 AEARRRAKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED 1418
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 307 AEANRSLILFANEMIVARRDAETARQDCENARRKRRSWPNRMADIAQD 450
AEA R A+ DAE AR++ E A R+RR R A+D
Sbjct: 1390 AEARRRAKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED 1437
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 307 AEANRSLILFANEMIVARRDAETARQDCENARRKRRSWPNRMADIAQD 450
AEA R A+ DAE AR++ E A R+RR R A+D
Sbjct: 1402 AEARRRAKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED 1449
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 307 AEANRSLILFANEMIVARRDAETARQDCENARRKRRSWPNRMADIAQD 450
AEA R A+ DAE AR++ E A R+RR R A+D
Sbjct: 1289 AEARRRAKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED 1336
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 307 AEANRSLILFANEMIVARRDAETARQDCENARRKRRSWPNRMADIAQD 450
AEA R A+ DAE AR++ E A R+RR R A+D
Sbjct: 1371 AEARRRAKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED 1418
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 307 AEANRSLILFANEMIVARRDAETARQDCENARRKRRSWPNRMADIAQD 450
AEA R A+ DAE AR++ E A R+RR R A+D
Sbjct: 1402 AEARRRAKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED 1449
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 307 AEANRSLILFANEMIVARRDAETARQDCENARRKRRSWPNRMADIAQD 450
AEA R A+ DAE AR++ E A R+RR R A+D
Sbjct: 1402 AEARRRAKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED 1449
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 307 AEANRSLILFANEMIVARRDAETARQDCENARRKRRSWPNRMADIAQD 450
AEA R A+ DAE AR++ E A R+RR R A+D
Sbjct: 1402 AEARRRAKDDADRARRMAEDAERARREAEEAERRRREEEERRRREAED 1449
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,052,899
Number of Sequences: 27780
Number of extensions: 396862
Number of successful extensions: 1151
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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