Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120222.Seq
         (736 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    24   1.7  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   5.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   5.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   5.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   6.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   9.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   9.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.1  

>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/54 (22%), Positives = 27/54 (50%)
 Frame = -3

Query: 389 QSCRAVSASRRATIISLANKMSDRLASAKSALATVNFCVRSSILA*HHLYPFQR 228
           Q C  V  S+ +    +A+K ++R    +  +    +C R+S++   H+Y + +
Sbjct: 9   QLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMT--HIYTYHK 60


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 459 GYHVLRNVRHAVGPAAPFPARVFAIL 382
           GY+V+  VR    P AP+     A++
Sbjct: 104 GYNVIEQVRTKEEPHAPYRYEAVAVI 129


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 459 GYHVLRNVRHAVGPAAPFPARVFAIL 382
           GY+V+  VR    P AP+     A++
Sbjct: 104 GYNVIEQVRTKEEPHAPYRYEAVAVI 129


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 459 GYHVLRNVRHAVGPAAPFPARVFAIL 382
           GY+V+  VR    P AP+     A++
Sbjct: 104 GYNVIEQVRTKEEPHAPYRYEAVAVI 129


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -2

Query: 324 RSVGFRQICVGHRQFLRQIVNFGITSFVSISTAGAYLRR 208
           R +  R + V +   + +I +FG++  +  +T GAY  R
Sbjct: 759 RDLAARNVLV-NAALVCKIADFGLSREIESATEGAYTTR 796


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +2

Query: 632 QSKGSHTAQQVQSQAQPHH 688
           Q +  H AQ +    Q HH
Sbjct: 793 QQRHQHAAQMIYGHQQSHH 811


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -1

Query: 463 VWLSRLAQCPPCGWA-SCAVSGARFRNLAEPFQRRVEPQSFRWQ 335
           +W +   Q P   +  + AVS   F  L  PF+  V  Q + WQ
Sbjct: 58  IWRNPSMQTPTNYYLFNLAVSDLLFLILGLPFELSVFWQQYPWQ 101


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 481 TAAGCWVWLSRLAQCPPCGW 422
           T AG W+    ++  P  GW
Sbjct: 156 TIAGVWILSGAISSPPLAGW 175


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 481 TAAGCWVWLSRLAQCPPCGW 422
           T AG W+    ++  P  GW
Sbjct: 156 TIAGVWILSGAISSPPLAGW 175


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -1

Query: 481 TAAGCWVWLSRLAQCPPCGW 422
           T AG W+    ++  P  GW
Sbjct: 156 TIAGVWILSGAISSPPLAGW 175


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,431
Number of Sequences: 438
Number of extensions: 4745
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)