Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120218.Seq
(638 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q90173 Cluster: Zinc finger protein CG30; n=5; Nucleopo... 162 6e-39
UniRef50_O10339 Cluster: Zinc finger protein CG30; n=7; Nucleopo... 107 3e-22
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 62 1e-08
UniRef50_Q77K64 Cluster: Cg30 protein; n=3; Nucleopolyhedrovirus... 51 3e-05
UniRef50_Q287I5 Cluster: CG30; n=1; Agrotis segetum nucleopolyhe... 46 0.001
UniRef50_Q0N424 Cluster: Cg30/ac88-like protein; n=1; Clanis bil... 46 0.001
UniRef50_Q9J861 Cluster: ORF76 cg30; n=1; Spodoptera exigua MNPV... 44 0.004
UniRef50_A0EYX0 Cluster: Cg30; n=1; Ecotropis obliqua NPV|Rep: C... 38 0.15
UniRef50_A0BC91 Cluster: Chromosome undetermined scaffold_10, wh... 36 0.82
UniRef50_UPI0000D557CB Cluster: PREDICTED: similar to ubiquitin-... 34 3.3
UniRef50_Q95XU0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 34 3.3
UniRef50_A5IZX6 Cluster: Cg30-2; n=1; Spodoptera litura granulov... 33 4.4
UniRef50_Q000Q6 Cluster: RING-14 protein; n=1; Gibberella zeae|R... 33 4.4
UniRef50_Q1L721 Cluster: E3 ubiquitin-protein ligase RNF138; n=4... 33 7.7
>UniRef50_Q90173 Cluster: Zinc finger protein CG30; n=5;
Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 -
Bombyx mori nuclear polyhedrosis virus (BmNPV)
Length = 266
Score = 162 bits (394), Expect = 6e-39
Identities = 73/90 (81%), Positives = 77/90 (85%)
Frame = +2
Query: 239 QIAMQLCFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPLCRV 418
++ +CFSVAEIKNYFMQPIDRLT+IPVLELDTCKHQLCSMC PCPLCRV
Sbjct: 5 KLQCNICFSVAEIKNYFMQPIDRLTMIPVLELDTCKHQLCSMCIRKIRKRKKTPCPLCRV 64
Query: 419 ESLHFNVYSINRNVVDVIKCSVTSVAQWNK 508
ESLHFNVYSINRNVVDVIKCSVTSVAQWNK
Sbjct: 65 ESLHFNVYSINRNVVDVIKCSVTSVAQWNK 94
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = +1
Query: 508 INDNFDAASLASVLFEKSLLDDAEDSNNAANSDXTML 618
IN NFDAASLASVLFEKSLLDDAEDSNNAANSD TML
Sbjct: 95 INGNFDAASLASVLFEKSLLDDAEDSNNAANSDDTML 131
>UniRef50_O10339 Cluster: Zinc finger protein CG30; n=7;
Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 249
Score = 107 bits (256), Expect = 3e-22
Identities = 45/90 (50%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
Frame = +2
Query: 239 QIAMQLCFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC---XXXXXXXXXXPCPL 409
++ +C SV EIKNYF+QP+D +TI+P++EL TC+HQLC MC CP+
Sbjct: 5 RLQCHICCSVGEIKNYFLQPVDAITILPIVELHTCRHQLCVMCVRKIAQRGRDKRVECPM 64
Query: 410 CRVESLHFNVYSINRNVVDVIKCSVTSVAQ 499
CR ++ HFNVYS+NRN VDV++CSV V +
Sbjct: 65 CRRKNAHFNVYSVNRNSVDVLRCSVADVRE 94
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/41 (65%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Frame = +1
Query: 1 DTRELDRTLSGYEEYPTYVPLFLGYQIINSENNFLR-NDFI 120
DTR L+RTL YEEYP YVPLFLGYQ++N +N+ LR N+F+
Sbjct: 276 DTRALERTLGRYEEYPMYVPLFLGYQLVNLQNDILRANNFL 316
>UniRef50_Q77K64 Cluster: Cg30 protein; n=3;
Nucleopolyhedrovirus|Rep: Cg30 protein - Helicoverpa
armigera NPV
Length = 283
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +2
Query: 254 LCFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPLCRVESLHF 433
+C A I N Q L ++P++ L +C H LC+MC CPLCR ++ +
Sbjct: 10 VCLGRATIYNNDQQ---ELLVLPLIVLQSCLHALCTMCLKRMRKSLIVKCPLCRSINIKY 66
Query: 434 NVYSINRNVVDVI 472
+ Y I+ N V+V+
Sbjct: 67 SYYCISGNTVNVV 79
>UniRef50_Q287I5 Cluster: CG30; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: CG30 - Agrotis segetum nuclear
polyhedrosis virus (AsNPV)
Length = 453
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +2
Query: 302 DRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXP--CPLCRVESLHFNVYSINRNVVDVIK 475
+ L I+P L L C H LC C CP+CR S F + SIN N + I
Sbjct: 33 ENLYIVPFLSLIECNHALCVHCVKNLQTSNRRAISCPMCREVSTKFRLISINNNELYTID 92
Query: 476 CSVTSV 493
C+ S+
Sbjct: 93 CTANSI 98
>UniRef50_Q0N424 Cluster: Cg30/ac88-like protein; n=1; Clanis
bilineata nucleopolyhedrosis virus|Rep: Cg30/ac88-like
protein - Clanis bilineata nucleopolyhedrosis virus
Length = 346
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/105 (19%), Positives = 48/105 (45%)
Frame = +2
Query: 194 SAKQAEV*PPKNGVCQIAMQLCFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXX 373
S + + P + ++ +C S + I + + D + P+ +L +C H +C +C
Sbjct: 27 SVENIVISPTSDEQVTLSCCVCLSESTINDTKDELDDNMFAFPLAQLVSCLHSICVVCAV 86
Query: 374 XXXXXXXXPCPLCRVESLHFNVYSINRNVVDVIKCSVTSVAQWNK 508
CPLCR +S ++++N+ + ++ +T + + +
Sbjct: 87 SLKQRQVISCPLCRTQSNKLVLFNVNKQTLMGVQVPITLIKSYGR 131
>UniRef50_Q9J861 Cluster: ORF76 cg30; n=1; Spodoptera exigua
MNPV|Rep: ORF76 cg30 - Spodoptera exigua MNPV
Length = 461
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 242 IAMQLCFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC--XXXXXXXXXXPCPLCR 415
+ +C S EIK F ++ ++P+ LD CKH LC MC CP CR
Sbjct: 6 LGCSVCMSEVEIKAGFGDVDPQMFVVPLFILDECKHVLCLMCCKSIQDGRRRAITCPTCR 65
Query: 416 VES 424
V S
Sbjct: 66 VSS 68
>UniRef50_A0EYX0 Cluster: Cg30; n=1; Ecotropis obliqua NPV|Rep: Cg30
- Ecotropis obliqua NPV
Length = 269
Score = 38.3 bits (85), Expect = 0.15
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 LCFSVAEIKNYFMQPIDRLTII-PVLELDTCKHQLCSMCXXXXXXXXXXPCPLCRVESLH 430
+C+S+ +I++ + I P+ L C H LC C CP CR +
Sbjct: 10 ICYSLTKIESVPSSNTKNVMYIYPLTVLSMCLHTLCFTCVSKLAKGKELKCPFCRTINTK 69
Query: 431 FNVYSINRNVVDVIKCSVTSVAQWNK 508
V+++NR + V A N+
Sbjct: 70 VRVHAVNRCEITSFHVGVNVFATRNE 95
>UniRef50_A0BC91 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 222
Score = 35.9 bits (79), Expect = 0.82
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 323 VLELDTCKHQLCSMCXXXXXXXXXXPCPLCRVE 421
V E+D CKHQ+C C CP CR +
Sbjct: 87 VCEIDVCKHQICLTCIKEWAEKYKTQCPYCRAK 119
>UniRef50_UPI0000D557CB Cluster: PREDICTED: similar to
ubiquitin-like, containing PHD and RING finger domains,
1; n=1; Tribolium castaneum|Rep: PREDICTED: similar to
ubiquitin-like, containing PHD and RING finger domains,
1 - Tribolium castaneum
Length = 715
Score = 33.9 bits (74), Expect = 3.3
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 341 CKHQLCSMCXXXXXXXXXXPCPLCRVESLHFNVYSINRNVVDVIK 475
CKH +C C CP CR E V ++N N+ +V++
Sbjct: 661 CKHNVCKGCLKRSFAAEIYVCPCCRFELGETYVMTVNDNLGEVLR 705
>UniRef50_Q95XU0 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 374
Score = 33.9 bits (74), Expect = 3.3
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = +2
Query: 254 LCFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPLCRVESLHF 433
LCF ++ +P D ++PV L C H +C +C CP+C
Sbjct: 10 LCFQCGKLYESITKPDDEAILVPV--LGACLHSICILC--ATGLESPNSCPICENPEAFG 65
Query: 434 NVYS 445
N+ S
Sbjct: 66 NIIS 69
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 33.9 bits (74), Expect = 3.3
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 13 LDRTLSGYEEYPTYVPLFLGYQIINSENNF 102
L ++LS YE YP VPL LG Q +N+ + +
Sbjct: 271 LQKSLSRYEPYPIVVPLMLGTQTLNTSSAY 300
>UniRef50_A5IZX6 Cluster: Cg30-2; n=1; Spodoptera litura
granulovirus|Rep: Cg30-2 - Spodoptera litura
granulovirus
Length = 360
Score = 33.5 bits (73), Expect = 4.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 314 IIPVLELDTCKHQLCSMCXXXXXXXXXXPCPLCR 415
+IP+L + C H LC+ C CP CR
Sbjct: 28 LIPMLTIAECNHHLCAACLYSIANNYEITCPTCR 61
>UniRef50_Q000Q6 Cluster: RING-14 protein; n=1; Gibberella zeae|Rep:
RING-14 protein - Gibberella zeae (Fusarium graminearum)
Length = 511
Score = 33.5 bits (73), Expect = 4.4
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 233 VC-QIAMQLCFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPL 409
VC Q++ +L V ++ +Y + +PV LD C+H C C CPL
Sbjct: 396 VCAQMSQELVSKVPQLNDYLCPVCFSVAYMPV-RLD-CQHVFCIRCVIKIQRRKEKHCPL 453
Query: 410 CRVE 421
CR +
Sbjct: 454 CRAD 457
>UniRef50_Q1L721 Cluster: E3 ubiquitin-protein ligase RNF138; n=4;
Xenopus|Rep: E3 ubiquitin-protein ligase RNF138 -
Xenopus laevis (African clawed frog)
Length = 222
Score = 32.7 bits (71), Expect = 7.7
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +2
Query: 269 AEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPLCR 415
+EI F+ P+ + + + TC+H C C CPLCR
Sbjct: 9 SEITEEFLCPVCQEILQTPVRTQTCRHVFCRKCFMLAMKSGGAYCPLCR 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,607,217
Number of Sequences: 1657284
Number of extensions: 8762632
Number of successful extensions: 20250
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20247
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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