Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120218.Seq
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   1.5  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   6.2  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   8.2  

>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 14/61 (22%), Positives = 28/61 (45%)
 Frame = -3

Query: 396  IFFRFLILRMHIEHN*CLHVSSSNTGIIVNLSIGCIK*FLISATEKQSCIAI*QTPFLGG 217
            + ++F +  ++ EH   L +   NTG    L +     ++   T+ QS +A+ +     G
Sbjct: 1182 VIYQFDLNLVNFEHRFKLDLEKQNTGSDYELRLRVCANYIPELTDSQSNMALIEVTLPSG 1241

Query: 216  Y 214
            Y
Sbjct: 1242 Y 1242


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -3

Query: 276 ISATEKQSCIAI*QTPFLGGYTSACFAENNTRRRTCQCAD 157
           +S TE  S +    T + GG  S    EN+TR    Q  D
Sbjct: 745 MSGTESMSALFRNYTSYFGGSPSFTNLENSTRNLDMQELD 784


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 509 IYSIVRHSSRCI*SRPQRFGLCCKR*NANF 420
           +Y++  H   CI     R G  C+R   NF
Sbjct: 357 LYNLTGHGGHCIDCGANRDGPNCERCKENF 386


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,384
Number of Sequences: 2352
Number of extensions: 10722
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)