Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120216.Seq
         (848 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   4.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   7.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   7.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   7.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.3  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    21   9.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.3  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 389 CLNMTR**EDSTRYTVHLPY 330
           CLN     + +T YT H PY
Sbjct: 70  CLNGATCQDHTTHYTCHCPY 89


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 609 IFSFYAFFHTNVSFAAFFKIG 547
           +F  +  FH  V  A  FKIG
Sbjct: 601 LFHCHIEFHVEVGMALVFKIG 621


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 140 QRSGTSFDCNKFLRSDDMTPVVTTITP 220
           ++SG S+  NK +   D +PV   + P
Sbjct: 52  EKSGGSYSSNKNVSRADHSPVFGKVEP 78


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 707 VQEEVYTKLLHCKRGFVYQCENRCLI 784
           +Q EV  K LH  R    Q E  CL+
Sbjct: 1   MQHEVVKKFLHSVRIVFVQSEIFCLV 26


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 439 PNSIHGILQWRGF 477
           P S+HG L WR F
Sbjct: 296 PLSLHGQLLWREF 308


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -3

Query: 510 HMYNRSPEILTKTPPL*NTVYGVRVNLSIKS 418
           H Y  S +   K P + N+ Y   +N+++K+
Sbjct: 3   HYYRLSLKSRQKAPKIVNSKYNSILNIALKN 33


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -3

Query: 510 HMYNRSPEILTKTPPL*NTVYGVRVNLSIKS 418
           H Y  S +   K P + N+ Y   +N+++K+
Sbjct: 3   HYYRLSLKSRQKAPKIVNSKYNSILNIALKN 33


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 149 GTSFDCNKFLRSDDMTPVVTT 211
           G SF   + LRSDD+    T+
Sbjct: 135 GVSFSKKQILRSDDLAVKTTS 155


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -2

Query: 727 SINLFLYIRRAVHCFFSNRPIFFV 656
           S+ +FL I  A HC+ +   +  +
Sbjct: 805 SVGVFLTIFNAAHCYLATELVLML 828


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +3

Query: 663 NIGRFEKKQCTARRMYRKRFILNCYIANVVSCTNVKTD 776
           N+ RF  +  T   M+   FIL  +++   SCT +  +
Sbjct: 378 NVLRFGAESQTINFMFSFGFILLRFLSVFESCTRLNNE 415


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,402
Number of Sequences: 336
Number of extensions: 4375
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)