Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120215.Seq
         (831 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069831-1|AAL39976.1|  485|Drosophila melanogaster SD07771p pro...    30   4.5  
AL138972-12|CAB72295.1|  721|Drosophila melanogaster EG:BACR7C10...    30   4.5  
AE014298-419|ABC67171.1|  485|Drosophila melanogaster CG9900-PC,...    30   4.5  
AE014298-418|AAF45794.1|  721|Drosophila melanogaster CG9900-PB,...    30   4.5  
X64390-1|CAB76122.1|  721|Drosophila melanogaster zw10 protein p...    29   5.9  

>AY069831-1|AAL39976.1|  485|Drosophila melanogaster SD07771p
           protein.
          Length = 485

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 281 KCIKMKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 457
           K  K   V  + V  +   +  D+ +    ++A  +++ +  +LE YET+K+K  +  YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193

Query: 458 AMLSTLEMTQPLLEI 502
              S  E    L+++
Sbjct: 194 LQQSLQERFDRLVQL 208


>AL138972-12|CAB72295.1|  721|Drosophila melanogaster
           EG:BACR7C10.3,FBgn0004643;mit(1)15 protein.
          Length = 721

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 281 KCIKMKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 457
           K  K   V  + V  +   +  D+ +    ++A  +++ +  +LE YET+K+K  +  YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193

Query: 458 AMLSTLEMTQPLLEI 502
              S  E    L+++
Sbjct: 194 LQQSLQERFDRLVQL 208


>AE014298-419|ABC67171.1|  485|Drosophila melanogaster CG9900-PC,
           isoform C protein.
          Length = 485

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 281 KCIKMKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 457
           K  K   V  + V  +   +  D+ +    ++A  +++ +  +LE YET+K+K  +  YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193

Query: 458 AMLSTLEMTQPLLEI 502
              S  E    L+++
Sbjct: 194 LQQSLQERFDRLVQL 208


>AE014298-418|AAF45794.1|  721|Drosophila melanogaster CG9900-PB,
           isoform B protein.
          Length = 721

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 281 KCIKMKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 457
           K  K   V  + V  +   +  D+ +    ++A  +++ +  +LE YET+K+K  +  YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193

Query: 458 AMLSTLEMTQPLLEI 502
              S  E    L+++
Sbjct: 194 LQQSLQERFDRLVQL 208


>X64390-1|CAB76122.1|  721|Drosophila melanogaster zw10 protein
           protein.
          Length = 721

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
 Frame = +2

Query: 281 KCIKMKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 457
           K  K   V  + V  +   +  D+ +    ++A  +++ +  +LE YET+K+K  +  YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193

Query: 458 AMLSTLEMTQPLLEI 502
              S  E    L+++
Sbjct: 194 LQQSLQERFARLVQL 208


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,474,103
Number of Sequences: 53049
Number of extensions: 617855
Number of successful extensions: 1305
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)