Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120209.Seq
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.4  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    22   5.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.8  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   7.6  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 579 DCVQTQRRQTVRHINQLRH 635
           DCV+++  + V++  +LRH
Sbjct: 258 DCVRSEASKVVKNAQKLRH 276


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 406 LTGVMVRIDNIHYSFSCYRF 347
           +TG+ V + NI  ++ CY F
Sbjct: 129 MTGIWVWLINISATYICYAF 148


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 406 LTGVMVRIDNIHYSFSCYRF 347
           +TG+ V + NI  ++ CY F
Sbjct: 362 MTGIWVWLINISATYICYAF 381


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 406 LTGVMVRIDNIHYSFSCYRF 347
           +TG+ V + NI  ++ CY F
Sbjct: 362 MTGIWVWLINISATYICYAF 381


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/19 (31%), Positives = 15/19 (78%)
 Frame = +3

Query: 75  KDKFENKHSDIEVCYVMNN 131
           ++K+ NK+ +++V  ++NN
Sbjct: 20  ENKYTNKYDNVDVDKILNN 38


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -2

Query: 175 HIKVCWLLTSWGCKRLFIT*HTSMSECLFSNLSLSTI 65
           H+ + W  TS  C R  I    ++S  +   + L TI
Sbjct: 253 HLAILWSCTSTNCPRFLIM--LALSYTVIQEVMLFTI 287


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 443 NRQQLCGQIFLDFDRR 396
           N  +LC Q+FL+ +RR
Sbjct: 202 NAVRLCFQVFLEGERR 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,644
Number of Sequences: 336
Number of extensions: 3790
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)