Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120209.Seq
         (719 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL593848-5|CAI17252.1|  146|Homo sapiens solute carrier family 2...    31   3.1  
AK128797-1|BAC87611.1|  201|Homo sapiens protein ( Homo sapiens ...    30   7.3  
AJ406937-1|CAC27576.1|  186|Homo sapiens keratin associated prot...    30   7.3  

>AL593848-5|CAI17252.1|  146|Homo sapiens solute carrier family 2
           (facilitated glucose transporter), member 6 protein.
          Length = 146

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 396 LWYELIISTIVSLVIGLSIRLLTNITLPKRDGLDTELF 283
           LW  L+  T+     GL+   +  +TLP R GL T +F
Sbjct: 33  LWMLLLGRTLTGFAGGLTAACIPGLTLPSRPGLGTSIF 70


>AK128797-1|BAC87611.1|  201|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45585 fis, clone BRTHA3013882. ).
          Length = 201

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = -2

Query: 667 CIENCSRALC*CRN*LICRTVWRRCVCTQSFLILETFFRVCLACCISKCDV*C 509
           C+ + S  LC C +  +C  +   C+C    + +     VCL  C+  C   C
Sbjct: 44  CVLSVSVCLCVCVSVCLCVCLVSVCLCVCLCVCVSVCLCVCLHLCVCVCGFVC 96


>AJ406937-1|CAC27576.1|  186|Homo sapiens keratin associated protein
           4.5 protein.
          Length = 186

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
 Frame = -2

Query: 667 CIENCSRALC*CRN*LICRTVWRRCVCTQSFLILETFFRV---CLACCISKC 521
           CI +C R  C C +   CR    R  C Q+     T  R    C +CC+S C
Sbjct: 61  CISSCCRPYC-CES-SCCRPCCCRPSCCQTTCCRTTCCRTTCCCPSCCVSSC 110


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,755,375
Number of Sequences: 237096
Number of extensions: 1903880
Number of successful extensions: 3697
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3693
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)