Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120206.Seq
         (588 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0CR02 Cluster: Chromosome undetermined scaffold_247, w...    35   1.6  
UniRef50_Q17AP4 Cluster: Putative uncharacterized protein; n=1; ...    33   3.7  
UniRef50_UPI00015B54AD Cluster: PREDICTED: similar to ENSANGP000...    33   6.5  

>UniRef50_A0CR02 Cluster: Chromosome undetermined scaffold_247, whole
            genome shotgun sequence; n=3; Eukaryota|Rep: Chromosome
            undetermined scaffold_247, whole genome shotgun sequence
            - Paramecium tetraurelia
          Length = 1876

 Score = 34.7 bits (76), Expect = 1.6
 Identities = 19/84 (22%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
 Frame = -1

Query: 429  RITLFETNTYSYYFYPFLTRSLEEHERLRFRQFPLSRLTREKTQCTLRLIVYYLC---FK 259
            R  +F +N Y+ +F P      +E + L+F +  + +  ++ T  T++++++ +     +
Sbjct: 805  RSEIFTSNNYALWFEPEKKEEFKEVQLLKFNEAQIEKYLKKYTIQTMKMLIFEIYEWQTQ 864

Query: 258  TAN*LLCLCTFKICLNSIF--FPR 193
             +N ++ +  F+IC    F  FPR
Sbjct: 865  VSNRVVDINKFEICWEKFFSQFPR 888


>UniRef50_Q17AP4 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 217

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
 Frame = +3

Query: 303 FFHVLSDLAET---AGILIVHAL---LTIALKRDRNSNCTC 407
           F HV  +L E     G+ IVH +   +TIA++ D N NCTC
Sbjct: 157 FLHVTHNLVENFYLIGVQIVHRVQFHITIAIRLDANFNCTC 197


>UniRef50_UPI00015B54AD Cluster: PREDICTED: similar to
           ENSANGP00000014849; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000014849 - Nasonia
           vitripennis
          Length = 712

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = -3

Query: 520 PLHRTKYL*LIRNVTLIHSYFLYNRSDLRTKNYAF*N 410
           PLH ++ L  +RNVTL+HS F +  + L   +Y F N
Sbjct: 80  PLHESRKLTFVRNVTLVHSEFKWYPASLAV-DYVFGN 115


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,650,501
Number of Sequences: 1657284
Number of extensions: 7828539
Number of successful extensions: 14830
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14829
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)