Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120206.Seq
(588 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 24 1.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 5.1
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 6.8
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 6.8
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 6.8
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 6.8
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 6.8
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 6.8
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 6.8
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 6.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 6.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 6.8
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.0
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.0
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 546 ISNKINYLNHYTGLNTY 496
+ NK+NY GLNTY
Sbjct: 216 LENKLNYFIEDIGLNTY 232
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 546 ISNKINYLNHYTGLNTY 496
+SN NY N+Y N Y
Sbjct: 307 LSNSCNYSNNYYNNNNY 323
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 567 LITELIQISNKINYLNHYTGLNTYS 493
+I+ +SN NY N+Y N ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 567 LITELIQISNKINYLNHYTGLNTYS 493
+I+ +SN NY N+Y N ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 567 LITELIQISNKINYLNHYTGLNTYS 493
+I+ +SN NY N+Y N ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 567 LITELIQISNKINYLNHYTGLNTYS 493
+I+ +SN NY N+Y N ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 567 LITELIQISNKINYLNHYTGLNTYS 493
+I+ +SN NY N+Y N ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 567 LITELIQISNKINYLNHYTGLNTYS 493
+I+ +SN NY N+Y N ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 567 LITELIQISNKINYLNHYTGLNTYS 493
+I+ +SN NY N+Y N ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHN 105
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 567 LITELIQISNKINYLNHYTGLNTYS 493
+I+ +SN NY N+Y N ++
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHN 105
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 567 LITELIQISNKINYLNHYTGLNTYS 493
+I+ +SN NY N+Y N ++
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHN 338
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 567 LITELIQISNKINYLNHYTGLNTYS 493
+I+ +SN NY N+Y N ++
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHN 338
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 546 ISNKINYLNHYTGLNTYS 493
+SN NY N+Y N ++
Sbjct: 88 LSNNYNYNNNYNNYNKHN 105
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 543 SNKINYLNHYTGLNTYS 493
SN NY N+Y N Y+
Sbjct: 325 SNYNNYNNNYNNYNNYN 341
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,011
Number of Sequences: 438
Number of extensions: 2967
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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