Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120205.Seq
(766 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41658 Cluster: Late expression factor 5; n=13; Nucleop... 175 1e-42
UniRef50_O10344 Cluster: Late expression factor 5; n=8; Nucleopo... 112 8e-24
UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2; ... 95 2e-18
UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Le... 84 3e-15
UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep: L... 83 1e-14
UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;... 56 1e-06
UniRef50_Q0ZP22 Cluster: Late expression factor 5; n=3; Nucleopo... 43 0.010
UniRef50_P24649 Cluster: DNA-binding protein; n=6; Nucleopolyhed... 41 0.039
UniRef50_UPI0000F1D641 Cluster: PREDICTED: similar to tenascin-R... 35 1.9
UniRef50_UPI000050FD95 Cluster: COG0491: Zn-dependent hydrolases... 34 3.4
UniRef50_Q54PR1 Cluster: Putative uncharacterized protein; n=1; ... 34 4.4
UniRef50_Q38X97 Cluster: DNA primase G; n=1; Lactobacillus sakei... 33 7.8
UniRef50_Q4UIC4 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
>UniRef50_P41658 Cluster: Late expression factor 5; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 265
Score = 175 bits (426), Expect = 1e-42
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = -2
Query: 753 PSVSDLVKERKQIRLQTEYLAKLFNNTINDFKLYTELYEFIERTEGVDCCCPCQLLHKSL 574
PSVSDLVKERKQIRLQTEYLAKLFNNTINDFKLYTELYEFIERTEGVDCCCPCQLLHKSL
Sbjct: 82 PSVSDLVKERKQIRLQTEYLAKLFNNTINDFKLYTELYEFIERTEGVDCCCPCQLLHKSL 141
Query: 573 FNTRNYVKTLNCKLFDIKPPKLKR 502
NT+NYV+ LNCKLFDIKPPK K+
Sbjct: 142 LNTKNYVENLNCKLFDIKPPKFKK 165
Score = 142 bits (343), Expect = 1e-32
Identities = 69/91 (75%), Positives = 73/91 (80%)
Frame = -1
Query: 523 KAAQIKKEPFDNIXXXXXXXXXXXXXXXKEKHTNTGCTRKKKIKHRQILNDKVIYLQNSN 344
K + KKEPFDNI KEKHT+TGCTRKKKIKHRQILNDKVIYLQNSN
Sbjct: 159 KPPKFKKEPFDNILYKYSLNYKSLLLKKKEKHTSTGCTRKKKIKHRQILNDKVIYLQNSN 218
Query: 343 KNKLFELSGLSLKSCRHDFVTVESQTRAGEK 251
KNKLFELSGLSLKSCRHDFVTVESQTRAG++
Sbjct: 219 KNKLFELSGLSLKSCRHDFVTVESQTRAGDE 249
Score = 41.1 bits (92), Expect = 0.029
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = -3
Query: 254 EIASFLRYCRMCGMSGC 204
EIASF+RYCR+CGMSGC
Sbjct: 249 EIASFIRYCRLCGMSGC 265
>UniRef50_O10344 Cluster: Late expression factor 5; n=8;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 263
Score = 112 bits (270), Expect = 8e-24
Identities = 58/124 (46%), Positives = 77/124 (62%)
Frame = -2
Query: 753 PSVSDLVKERKQIRLQTEYLAKLFNNTINDFKLYTELYEFIERTEGVDCCCPCQLLHKSL 574
P+VS+LVKERKQIRLQ + + +LF NT NDFK+Y EL+ FI+ G + CPC LL +S
Sbjct: 77 PNVSELVKERKQIRLQIDCVMRLFKNTTNDFKMYVELFAFIDAHGGAE--CPCLLLQQSK 134
Query: 573 FNTRNYVKTLNCKLFDIKPPKLKRNLSTIFFTSIP*ITKVYC*KKRKSIPTLGVRAKRKS 394
N ++V+ LNCKLFDIKPPK K+ + K C KK++ T+G KR+
Sbjct: 135 LNAVSFVENLNCKLFDIKPPKFKKEPFDSILSKYSLNYKALCFKKKEKC-TVGCVTKRQK 193
Query: 393 NTDR 382
R
Sbjct: 194 KMKR 197
Score = 68.1 bits (159), Expect = 2e-10
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Frame = -1
Query: 523 KAAQIKKEPFDNIXXXXXXXXXXXXXXXKEKHTNTGCT--RKKKIKHRQILNDKVIYLQN 350
K + KKEPFD+I KEK T GC R+KK+K RQ+L+D+VIYL N
Sbjct: 152 KPPKFKKEPFDSILSKYSLNYKALCFKKKEKCT-VGCVTKRQKKMKRRQLLSDRVIYLHN 210
Query: 349 SN-----KNKLFELSGLSLKSCRHDFVTVESQTRAGEK 251
N + L SG SL C H + TVE QTRAG++
Sbjct: 211 KNDVLDERTLLHGPSGTSLAPCLHRYATVERQTRAGDE 248
>UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Plutella xylostella multiple
nucleopolyhedrovirus
Length = 74
Score = 95.1 bits (226), Expect = 2e-18
Identities = 41/55 (74%), Positives = 42/55 (76%)
Frame = -1
Query: 166 MNGSWIFCMCEVYPGGVCNPSFCVCV*YRLKNGAGVSNHMWHRLKNDDGDDKPCL 2
MNGSWIFCMC VYPGGVCNPSFC CV SNHMW+RLKN DGDDKPCL
Sbjct: 1 MNGSWIFCMCGVYPGGVCNPSFCACV----------SNHMWYRLKNGDGDDKPCL 45
>UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Lef5
- Helicoverpa armigera NPV
Length = 315
Score = 84.2 bits (199), Expect = 3e-15
Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = -2
Query: 753 PSVSDLVKERKQIRLQTEYLAKLFNNTINDFKLYTELYEFIERTE--GVDCCCPCQLLHK 580
PSV++ +ERKQIRL TE + KLF NTINDFK+Y E+++ I T + CPCQ++
Sbjct: 89 PSVTNAERERKQIRLSTECIHKLFVNTINDFKMYGEIFDLIHTTPEYKIKYVCPCQIMLD 148
Query: 579 SLFNTRNYVKTLNCKLFDIKPPKLKR 502
++YV + K FD KPPKLK+
Sbjct: 149 KRDAIQSYVDKIKTKKFDSKPPKLKK 174
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/56 (46%), Positives = 43/56 (76%), Gaps = 3/56 (5%)
Frame = -1
Query: 409 RKKKIKHRQILNDKVIY---LQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGEK 251
+K+++K R IL D++I + +S K KL+ ++G+SL++C+H FVTVE QTRAG++
Sbjct: 240 KKRRLKKRNILTDELILFKPINSSLKYKLYSINGMSLRACQHSFVTVEKQTRAGDE 295
>UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep:
Lef-5 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 302
Score = 82.6 bits (195), Expect = 1e-14
Identities = 40/86 (46%), Positives = 56/86 (65%)
Frame = -2
Query: 753 PSVSDLVKERKQIRLQTEYLAKLFNNTINDFKLYTELYEFIERTEGVDCCCPCQLLHKSL 574
P+++ +ERKQIRL + + KLF+NTIN FKLY EL++ I + + CPCQLL
Sbjct: 88 PALTGSERERKQIRLSVDCVHKLFDNTINPFKLYGELFDMINADQQLIGTCPCQLLLARR 147
Query: 573 FNTRNYVKTLNCKLFDIKPPKLKRNL 496
+NYV + K FD KPPKLK+++
Sbjct: 148 EVIKNYVLLIKEKKFDTKPPKLKKDI 173
Score = 40.3 bits (90), Expect = 0.051
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = -1
Query: 436 EKHTNTGCTRKKKIKHRQILNDKVIYLQNS--NKNKLFELSGLSLKSCRHDFVTVESQTR 263
+ H NT T K LN+ + + + ++L +SG+SL C+H+FV VE Q R
Sbjct: 220 KSHHNTTDTFVTANKKYNTLNNNSLNAAAAAADADRLHPMSGMSLNLCKHEFVVVERQLR 279
Query: 262 AGEKSL 245
AG++++
Sbjct: 280 AGDEAV 285
>UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;
Granulovirus|Rep: Late expression factor 5 homolog -
Cryptophlebia leucotreta granulosis virus (ClGV)
(Cryptophlebialeucotreta granulovirus)
Length = 240
Score = 56.0 bits (129), Expect = 1e-06
Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Frame = -2
Query: 732 KERKQIRLQTEYLAKLFNNTINDFKLYTELYEFIERTEGVDCCCPCQLLHKSLFNTRNYV 553
KERKQIRL + + L +T NDFKLY +L + + D CPC+L+ L + Y
Sbjct: 74 KERKQIRL--DCIENLLESTKNDFKLYEDLIKLMNG----DDKCPCELITARLNDNIAYN 127
Query: 552 KTLNCKLFDIKPPKLKRN-LSTIFFTSIP*ITKVYC*KKRKSIP--TLGVRAKRKSNTD 385
++L K FD KP KLK+ + +I F I K++S+P T +++ K N D
Sbjct: 128 ESLKNKNFDSKPCKLKKEPIDSILFKYS--INWKNSLNKKRSLPKSTTTKKSEEKENMD 184
Score = 42.3 bits (95), Expect = 0.013
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Frame = -1
Query: 664 FQTVH*VVRVYRTDRRCRLLLSVPAIAQESI*HEKLRKNPKL*TV*HKAAQIKKEPFDNI 485
F+ ++++ D +C L + A ++I + + KN + K ++KKEP D+I
Sbjct: 95 FKLYEDLIKLMNGDDKCPCEL-ITARLNDNIAYNESLKNKNFDS---KPCKLKKEPIDSI 150
Query: 484 XXXXXXXXXXXXXXXKEKHTNTGCTRKKKIKHRQILND-KVIYLQNSNKNKLFELSGLSL 308
+K + T KK + ++ +++ +V + S+++ L L+G ++
Sbjct: 151 LFKYSINWKNSLN---KKRSLPKSTTTKKSEEKENMDEIEVDASKISSQSSLSNLNGYTI 207
Query: 307 KSCRHDFVTVESQTRAGEKSLRSFATVGCVEC 212
SC HD+V E Q RAG++ + SF C +C
Sbjct: 208 ASCVHDYVIEEHQLRAGDEMV-SFIKF-CKKC 237
>UniRef50_Q0ZP22 Cluster: Late expression factor 5; n=3;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Neodiprion abietis nucleopolyhedrovirus
Length = 235
Score = 42.7 bits (96), Expect = 0.010
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = -2
Query: 732 KERKQIRLQTEYLAKLFNNTINDFKLYTELYEFIERTEGVDC-CCPCQLLHKSLFNTRNY 556
+E+KQI L + ++ T N+ KLY+E+ R G+D CPC+ +++ L +++
Sbjct: 70 REKKQISLDERKIEQMHRVTNNNAKLYSEI-----RKSGIDDNTCPCETINEYLLEIKSF 124
Query: 555 VKTLNCKLFDIKPPKLKRNL 496
K F+ P KL NL
Sbjct: 125 KNARGHKNFNQPPAKLTPNL 144
>UniRef50_P24649 Cluster: DNA-binding protein; n=6;
Nucleopolyhedrovirus|Rep: DNA-binding protein - Bombyx
mori nuclear polyhedrosis virus (BmNPV)
Length = 65
Score = 40.7 bits (91), Expect = 0.039
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1
Query: 7 MVYRRRRRSSTGATYGLT 60
MVYRRRRRSSTGATYGLT
Sbjct: 1 MVYRRRRRSSTGATYGLT 18
>UniRef50_UPI0000F1D641 Cluster: PREDICTED: similar to tenascin-R;
n=1; Danio rerio|Rep: PREDICTED: similar to tenascin-R -
Danio rerio
Length = 618
Score = 35.1 bits (77), Expect = 1.9
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -1
Query: 205 VNSSVFCNFGGLSMNGSWIFCMCEVYPGGVCNPSFCVC 92
VN S C G L + S IFC GVC FCVC
Sbjct: 272 VNGSCQCRSGFLGEDCSLIFCANNCSQRGVCKEGFCVC 309
>UniRef50_UPI000050FD95 Cluster: COG0491: Zn-dependent hydrolases,
including glyoxylases; n=1; Brevibacterium linens
BL2|Rep: COG0491: Zn-dependent hydrolases, including
glyoxylases - Brevibacterium linens BL2
Length = 255
Score = 34.3 bits (75), Expect = 3.4
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +2
Query: 20 AVVVLQPVPHMV*HAGAVLQPVSHADAEARVTDAARVDLAHTEDPGAVH*QAAEVTEHAT 199
+ VV+ P P M H A L V+ D A V D H+E G++ A EV +A
Sbjct: 28 SAVVIDPGPEMADHCQAFLAEVADRDLTAIVLTHQHAD--HSEMLGSIEQWAPEVPVYAV 85
Query: 200 INSQTFHTSDSSEG 241
+ HT ++G
Sbjct: 86 LERFARHTEPVADG 99
>UniRef50_Q54PR1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 352
Score = 33.9 bits (74), Expect = 4.4
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -2
Query: 750 SVSDLVKERKQIRLQTEYLAKLFNNTINDFKLYTELYEFIERTEGVDCCCPCQLLHKSLF 571
SV+ + ++ YL K NT+ + K + +++FIE G + + ++
Sbjct: 240 SVTGEMFNNSSLKFDQNYLFKNLRNTVQNVKTHHNIFKFIEENGGTNVIVVEISPNPTMI 299
Query: 570 NT-RNYVKTLNCKLFDIKPPKLKRNLS 493
T + +KT++ KLF+ K N++
Sbjct: 300 PTIKESLKTIDSKLFNSLRENYKNNIT 326
>UniRef50_Q38X97 Cluster: DNA primase G; n=1; Lactobacillus sakei
subsp. sakei 23K|Rep: DNA primase G - Lactobacillus
sakei subsp. sakei (strain 23K)
Length = 627
Score = 33.1 bits (72), Expect = 7.8
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 74 LQPVSHADAEARVTDAARVDLAHTEDPGAVH*QAAEVTEHATINSQ 211
L+ +S +A +V D A V LA + P AVH +++EVT+ + Q
Sbjct: 77 LEQISFPEALTKVADFAGVTLADSYKPTAVHRESSEVTQFKQLYQQ 122
>UniRef50_Q4UIC4 Cluster: Putative uncharacterized protein; n=1;
Theileria annulata|Rep: Putative uncharacterized protein
- Theileria annulata
Length = 1232
Score = 33.1 bits (72), Expect = 7.8
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = -2
Query: 687 LFNNTINDFKLYTELYEFIERTEGVDCCCPCQLLHKSLFNTRNYVKTLNCKLFDIKPPKL 508
L T DF Y+ L+EF+ + +D C Q L ++ N + K + IK P+
Sbjct: 184 LILQTFEDFNDYSNLFEFVSKF--IDSC--YQNLESNVINLNSAFKGIKLSSKIIKSPEP 239
Query: 507 KRNLSTIF 484
+RNL ++
Sbjct: 240 QRNLPNLY 247
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,917,497
Number of Sequences: 1657284
Number of extensions: 13960241
Number of successful extensions: 40942
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 39198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40920
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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