Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120203.Seq
         (842 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RSV2 Cluster: Putative uncharacterized protein PY0025...    34   5.1  

>UniRef50_Q7RSV2 Cluster: Putative uncharacterized protein PY00251;
           n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY00251 - Plasmodium yoelii yoelii
          Length = 1026

 Score = 33.9 bits (74), Expect = 5.1
 Identities = 21/79 (26%), Positives = 42/79 (53%)
 Frame = +3

Query: 348 SMKKNMYLLIK*HFLKLDNVTNLY*KLIIQCPKHVHCAKKHVFNYYYFIFNWSKRYTVKL 527
           S  KN++  IK  FL L  +++++ K+ +   K+    KK+  NY    +    +Y+++ 
Sbjct: 672 SKNKNIFDYIKMFFLSLKCISHIFEKIKLYYDKN-GTKKKYWENYNDIFYKSEWKYSMQD 730

Query: 528 NQTAILIEYKKCKQFNYNY 584
           N+   ++ YK  K + Y+Y
Sbjct: 731 NELEYILNYKNFKSW-YDY 748


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,188,581
Number of Sequences: 1657284
Number of extensions: 10457210
Number of successful extensions: 21708
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 20582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21704
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73783549980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)