Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120203.Seq
         (842 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46669-4|AAQ65208.1|  557|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z78065-3|CAB01517.2|  406|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>U46669-4|AAQ65208.1|  557|Caenorhabditis elegans Hypothetical
           protein C41G11.4c protein.
          Length = 557

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 463 FAQCTCFGH*IINFQYRFVTLSNFKKCYLMRRYIFFFI 350
           F  C C GH   +F+Y F+T +N+    +   YI  F+
Sbjct: 510 FPVCQCTGHIQCSFKYYFIT-NNYSSFSIFSYYIVQFL 546


>Z78065-3|CAB01517.2|  406|Caenorhabditis elegans Hypothetical
           protein T09E8.4 protein.
          Length = 406

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = -1

Query: 599 NENELIVIIELFTFFVFYKYCSLIQLYC--IAF 507
           N+NE+ V+++    FVF++  S + L C  IAF
Sbjct: 309 NKNEIRVLVQAIVIFVFFQASSSVFLICQTIAF 341


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,611,419
Number of Sequences: 27780
Number of extensions: 278172
Number of successful extensions: 489
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)