Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120201.Seq
(858 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 27 0.25
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 24 1.8
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 24 1.8
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 24 1.8
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 22 5.4
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 22 7.1
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 21 9.4
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 21 9.4
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 21 9.4
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 21 9.4
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 26.6 bits (56), Expect = 0.25
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 3 FFFFCLEMVLFYCYRSYAL 59
+F+F L+ V+F CY +Y +
Sbjct: 138 YFWFVLKQVMFLCYSTYGI 156
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 23.8 bits (49), Expect = 1.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3
Query: 9 FFCLEMVLFYC 41
FFC +V+FYC
Sbjct: 67 FFCTALVIFYC 77
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.8 bits (49), Expect = 1.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3
Query: 9 FFCLEMVLFYC 41
FFC +V+FYC
Sbjct: 300 FFCTALVIFYC 310
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 23.8 bits (49), Expect = 1.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3
Query: 9 FFCLEMVLFYC 41
FFC +V+FYC
Sbjct: 300 FFCTALVIFYC 310
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -1
Query: 639 MPKAKLHRPRRMPRNEQTAWRPILG*SY 556
MP +H P P Q A + I+G Y
Sbjct: 452 MPSQYIHEPWTAPEQVQRAAKCIIGKDY 479
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -2
Query: 602 QEMNKPPGDP 573
Q M++PPGDP
Sbjct: 429 QMMHRPPGDP 438
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 362 MNKFADTLTGRTIT 403
M F TLTG+TIT
Sbjct: 1 MQIFVKTLTGKTIT 14
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 362 MNKFADTLTGRTIT 403
M F TLTG+TIT
Sbjct: 1 MQIFVKTLTGKTIT 14
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 362 MNKFADTLTGRTIT 403
M F TLTG+TIT
Sbjct: 77 MQIFVKTLTGKTIT 90
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 362 MNKFADTLTGRTIT 403
M F TLTG+TIT
Sbjct: 153 MQIFVKTLTGKTIT 166
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 362 MNKFADTLTGRTIT 403
M F TLTG+TIT
Sbjct: 229 MQIFVKTLTGKTIT 242
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 362 MNKFADTLTGRTIT 403
M F TLTG+TIT
Sbjct: 305 MQIFVKTLTGKTIT 318
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 362 MNKFADTLTGRTIT 403
M F TLTG+TIT
Sbjct: 381 MQIFVKTLTGKTIT 394
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 362 MNKFADTLTGRTIT 403
M F TLTG+TIT
Sbjct: 457 MQIFVKTLTGKTIT 470
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 362 MNKFADTLTGRTIT 403
M F TLTG+TIT
Sbjct: 533 MQIFVKTLTGKTIT 546
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 362 MNKFADTLTGRTIT 403
M F TLTG+TIT
Sbjct: 609 MQIFVKTLTGKTIT 622
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 362 MNKFADTLTGRTIT 403
M F TLTG+TIT
Sbjct: 1 MQIFVKTLTGKTIT 14
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 362 MNKFADTLTGRTIT 403
M F TLTG+TIT
Sbjct: 49 MQIFVKTLTGKTIT 62
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,631
Number of Sequences: 336
Number of extensions: 3166
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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