Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120199.Seq
         (741 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     29   0.061
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    28   0.080
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   3.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   7.0  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   9.2  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   9.2  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   9.2  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   9.2  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 28.7 bits (61), Expect = 0.061
 Identities = 16/51 (31%), Positives = 31/51 (60%)
 Frame = +2

Query: 260 EKIQKTYELAEFDLKNLSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEI 412
           E++++T E  E DL+     E  + L ++ +++KY+  L  +E T+P+L I
Sbjct: 74  EELRRT-EAFEVDLEFYLGKEWKKNLNLRDSVTKYLIHLKEIEDTEPILLI 123


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 28.3 bits (60), Expect = 0.080
 Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -2

Query: 623 IDGLSTEHNST-PSFSVNKMGSPGMLVSLVSVTTN 522
           +D +  EH +T P ++V ++  PG+ ++ + +TTN
Sbjct: 408 VDDVFQEHKNTLPQYTVQQLDFPGIEIADIKLTTN 442


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 254 VYNFGDRSNFVAFDTF 207
           ++ F D SNF+A +TF
Sbjct: 179 IHLFHDASNFIAMETF 194


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 497 VTNFLTKWSLWSLKLMT 547
           V  +L KW  W LK  T
Sbjct: 258 VPTYLIKWKNWDLKYNT 274


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -1

Query: 408 SNSGWVISRVLSIAMYLLSANLIFRV 331
           +  G  +S VLS+++  L+++LIF +
Sbjct: 10  AGGGGRLSSVLSLSLTSLASSLIFTI 35


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -1

Query: 408 SNSGWVISRVLSIAMYLLSANLIFRV 331
           +  G  +S VLS+++  L+++LIF +
Sbjct: 10  AGGGGRLSSVLSLSLTSLASSLIFTI 35


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -1

Query: 408 SNSGWVISRVLSIAMYLLSANLIFRV 331
           +  G  +S VLS+++  L+++LIF +
Sbjct: 10  AGGGGRLSSVLSLSLTSLASSLIFTI 35


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -1

Query: 408 SNSGWVISRVLSIAMYLLSANLIFRV 331
           +  G  +S VLS+++  L+++LIF +
Sbjct: 10  AGGGGRLSSVLSLSLTSLASSLIFTI 35


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,990
Number of Sequences: 438
Number of extensions: 4056
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)