Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120198.Seq
(801 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 156 5e-37
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 153 7e-36
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 140 3e-32
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 137 3e-31
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 130 5e-29
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 128 2e-28
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 126 5e-28
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 124 2e-27
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 124 2e-27
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 113 5e-24
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 112 1e-23
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 111 3e-23
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 111 3e-23
UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1; ... 110 3e-23
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 110 5e-23
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 107 2e-22
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 107 4e-22
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 99 6e-20
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 99 1e-19
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 97 3e-19
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 97 5e-19
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 97 5e-19
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 97 5e-19
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 97 6e-19
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 95 2e-18
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 95 2e-18
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 94 4e-18
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 93 6e-18
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 93 7e-18
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 93 7e-18
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 93 1e-17
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 93 1e-17
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 92 1e-17
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 92 2e-17
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 92 2e-17
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 91 2e-17
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 91 2e-17
UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1; Ostreo... 91 3e-17
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 91 3e-17
UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole... 91 4e-17
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 91 4e-17
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 91 4e-17
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 90 5e-17
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 89 1e-16
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 89 2e-16
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 89 2e-16
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 88 2e-16
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 88 3e-16
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 88 3e-16
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 88 3e-16
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 87 4e-16
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 87 5e-16
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 86 8e-16
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 86 1e-15
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 86 1e-15
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 86 1e-15
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 85 2e-15
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 85 3e-15
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 85 3e-15
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 85 3e-15
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 83 6e-15
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 83 6e-15
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 83 8e-15
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 82 1e-14
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 82 2e-14
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 82 2e-14
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 81 3e-14
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 81 3e-14
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 81 4e-14
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 80 6e-14
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 80 6e-14
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 80 7e-14
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 79 1e-13
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 79 1e-13
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 79 1e-13
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 79 1e-13
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 79 2e-13
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 79 2e-13
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 78 3e-13
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 77 4e-13
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 77 5e-13
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 77 5e-13
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 76 9e-13
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 76 9e-13
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 76 9e-13
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 76 1e-12
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 76 1e-12
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 75 2e-12
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 75 2e-12
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 74 4e-12
UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein p... 74 5e-12
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 74 5e-12
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 73 6e-12
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 73 6e-12
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 73 8e-12
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 73 8e-12
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 73 8e-12
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 73 1e-11
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 73 1e-11
UniRef50_Q752X1 Cluster: AFR452Cp; n=1; Eremothecium gossypii|Re... 72 2e-11
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 71 3e-11
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 71 3e-11
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 71 3e-11
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 71 3e-11
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 71 5e-11
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 71 5e-11
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 71 5e-11
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 70 6e-11
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 70 6e-11
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 70 8e-11
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 70 8e-11
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 69 1e-10
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 69 1e-10
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 69 1e-10
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 69 1e-10
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 69 1e-10
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 69 2e-10
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 69 2e-10
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 68 2e-10
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 68 3e-10
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 68 3e-10
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 68 3e-10
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 68 3e-10
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 68 3e-10
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 68 3e-10
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 68 3e-10
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 68 3e-10
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 67 4e-10
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 67 4e-10
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 67 4e-10
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 67 6e-10
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 67 6e-10
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 67 6e-10
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 67 6e-10
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 67 6e-10
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 67 6e-10
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 66 7e-10
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 66 7e-10
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 66 7e-10
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 66 1e-09
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 66 1e-09
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 66 1e-09
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 66 1e-09
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 66 1e-09
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 66 1e-09
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 65 2e-09
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 65 2e-09
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 65 2e-09
UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome s... 64 3e-09
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 64 3e-09
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 64 3e-09
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 64 3e-09
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 64 3e-09
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 64 4e-09
UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heteroca... 64 4e-09
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 64 4e-09
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 64 5e-09
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 64 5e-09
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 64 5e-09
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 64 5e-09
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 64 5e-09
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 64 5e-09
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 64 5e-09
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 63 7e-09
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 63 7e-09
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 63 7e-09
UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein; ... 63 7e-09
UniRef50_UPI00006CB2CD Cluster: DEAD/DEAH box helicase family pr... 63 9e-09
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 63 9e-09
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 63 9e-09
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 63 9e-09
UniRef50_UPI0000E47F75 Cluster: PREDICTED: similar to DEAD (Asp-... 62 1e-08
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 62 1e-08
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 62 1e-08
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 62 1e-08
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 62 1e-08
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 62 2e-08
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 62 2e-08
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 62 2e-08
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 62 2e-08
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 62 2e-08
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 62 2e-08
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 62 2e-08
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 62 2e-08
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 62 2e-08
UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5; Actino... 62 2e-08
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 62 2e-08
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 2e-08
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 62 2e-08
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 62 2e-08
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 62 2e-08
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 61 3e-08
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 61 3e-08
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 61 3e-08
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 61 3e-08
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 61 3e-08
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 61 3e-08
UniRef50_P36120 Cluster: ATP-dependent RNA helicase DBP7; n=5; S... 61 3e-08
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 61 3e-08
UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10, part... 61 4e-08
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 61 4e-08
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 61 4e-08
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 61 4e-08
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 61 4e-08
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 61 4e-08
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 61 4e-08
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 61 4e-08
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 60 5e-08
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 60 5e-08
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 60 5e-08
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 60 5e-08
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 60 5e-08
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 60 5e-08
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 60 5e-08
UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila m... 60 5e-08
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 60 5e-08
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 60 5e-08
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 60 5e-08
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 60 5e-08
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 60 6e-08
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 60 6e-08
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 60 6e-08
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 60 6e-08
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 60 6e-08
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 60 6e-08
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 60 6e-08
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 60 8e-08
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 60 8e-08
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 60 8e-08
UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio bacteri... 60 8e-08
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 60 8e-08
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 60 8e-08
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 60 8e-08
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 60 8e-08
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 60 8e-08
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 59 1e-07
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 59 1e-07
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 59 1e-07
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 59 1e-07
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 59 1e-07
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 59 1e-07
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 59 1e-07
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 59 1e-07
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 59 1e-07
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 59 1e-07
UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole gen... 59 1e-07
UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Re... 59 1e-07
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 59 1e-07
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 59 1e-07
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 59 1e-07
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 59 1e-07
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 59 1e-07
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 59 1e-07
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 59 1e-07
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 58 2e-07
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 58 2e-07
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 58 2e-07
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 58 2e-07
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 58 2e-07
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 58 2e-07
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 58 2e-07
UniRef50_A7AM30 Cluster: RNA helicase family protein; n=1; Babes... 58 2e-07
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 58 2e-07
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 58 2e-07
UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1; S... 58 2e-07
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 58 3e-07
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 58 3e-07
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 58 3e-07
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 58 3e-07
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 58 3e-07
UniRef50_A6RSH5 Cluster: Putative uncharacterized protein; n=2; ... 58 3e-07
UniRef50_Q9H8H2 Cluster: Probable ATP-dependent RNA helicase DDX... 58 3e-07
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 58 3e-07
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 58 3e-07
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 58 3e-07
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 58 3e-07
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 58 3e-07
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 58 3e-07
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 58 3e-07
UniRef50_Q5BYH3 Cluster: SJCHGC05414 protein; n=1; Schistosoma j... 58 3e-07
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 58 3e-07
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 58 3e-07
UniRef50_Q5KAI2 Cluster: ATP-dependent RNA helicase DBP7; n=1; F... 58 3e-07
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 57 4e-07
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 57 4e-07
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 57 4e-07
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 57 4e-07
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 57 4e-07
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 57 4e-07
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 57 4e-07
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 57 4e-07
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 57 4e-07
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 57 4e-07
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 57 4e-07
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 57 4e-07
UniRef50_Q7R388 Cluster: GLP_111_80478_82724; n=1; Giardia lambl... 57 4e-07
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 57 4e-07
UniRef50_Q4DJM0 Cluster: ATP-dependent RNA helicase, putative; n... 57 4e-07
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 57 4e-07
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co... 57 4e-07
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 57 4e-07
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 57 4e-07
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 57 6e-07
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 57 6e-07
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 57 6e-07
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 57 6e-07
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 57 6e-07
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 57 6e-07
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 57 6e-07
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 57 6e-07
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 57 6e-07
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 57 6e-07
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 57 6e-07
UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1; ... 57 6e-07
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 57 6e-07
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 57 6e-07
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 57 6e-07
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 57 6e-07
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 57 6e-07
UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;... 57 6e-07
UniRef50_Q9RXH8 Cluster: ATP-dependent RNA helicase, putative; n... 56 8e-07
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 56 8e-07
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 56 8e-07
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 56 8e-07
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 56 8e-07
UniRef50_Q4HZ68 Cluster: ATP-dependent RNA helicase DBP7; n=1; G... 56 8e-07
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 56 1e-06
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 56 1e-06
UniRef50_UPI00003937F7 Cluster: COG0513: Superfamily II DNA and ... 56 1e-06
UniRef50_Q8G5U3 Cluster: Possible ATP-dependent RNA helicase; n=... 56 1e-06
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 56 1e-06
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 56 1e-06
UniRef50_A7QRK7 Cluster: Chromosome undetermined scaffold_151, w... 56 1e-06
UniRef50_Q7RFI2 Cluster: Drosophila melanogaster BcDNA.GH02833; ... 56 1e-06
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 56 1e-06
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 56 1e-06
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 56 1e-06
UniRef50_A5DAR2 Cluster: ATP-dependent RNA helicase DBP7; n=2; P... 56 1e-06
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 56 1e-06
UniRef50_Q5KMS9 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 56 1e-06
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 56 1e-06
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 56 1e-06
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 56 1e-06
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 56 1e-06
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 56 1e-06
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 56 1e-06
UniRef50_A5KC62 Cluster: DEAD/DEAH box helicase, putative; n=10;... 56 1e-06
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 56 1e-06
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 56 1e-06
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 56 1e-06
UniRef50_Q56X76 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 56 1e-06
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 55 2e-06
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 55 2e-06
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 55 2e-06
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 55 2e-06
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 55 2e-06
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 55 2e-06
UniRef50_A7U5X0 Cluster: DEAD-box helicase 10; n=2; Plasmodium f... 55 2e-06
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 55 2e-06
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 55 2e-06
UniRef50_Q0U210 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 55 2e-06
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 55 2e-06
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 55 2e-06
UniRef50_UPI0000E48927 Cluster: PREDICTED: similar to DEAD box A... 47 2e-06
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 55 2e-06
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 55 2e-06
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 55 2e-06
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 55 2e-06
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 55 2e-06
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 55 2e-06
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 55 2e-06
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 55 2e-06
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 55 2e-06
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 55 2e-06
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 55 2e-06
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 55 2e-06
UniRef50_Q0UHM7 Cluster: ATP-dependent RNA helicase DBP7; n=1; P... 55 2e-06
UniRef50_UPI0000D573C1 Cluster: PREDICTED: similar to CG8611-PA,... 54 3e-06
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 54 3e-06
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 54 3e-06
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 54 3e-06
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 54 3e-06
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 54 3e-06
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 54 3e-06
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 54 3e-06
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 54 3e-06
UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 54 3e-06
UniRef50_A7SJ72 Cluster: Predicted protein; n=1; Nematostella ve... 54 3e-06
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 54 3e-06
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 54 3e-06
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 54 3e-06
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 54 3e-06
UniRef50_A3LWH3 Cluster: ATP-dependent RNA helicase DBP7; n=2; S... 54 3e-06
UniRef50_Q754J2 Cluster: ATP-dependent RNA helicase DBP7; n=1; E... 54 3e-06
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 54 4e-06
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 54 4e-06
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 54 4e-06
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 54 4e-06
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 54 4e-06
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 54 4e-06
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 54 4e-06
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 54 4e-06
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 54 4e-06
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 54 4e-06
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 54 4e-06
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 54 4e-06
UniRef50_Q9W3Y5 Cluster: Putative ATP-dependent RNA helicase CG1... 54 4e-06
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 54 4e-06
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 54 4e-06
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 54 4e-06
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 54 6e-06
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 54 6e-06
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 54 6e-06
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 54 6e-06
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 54 6e-06
UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1; Bigelo... 54 6e-06
UniRef50_Q5CR74 Cluster: Dbp7p, eIF4A-a-family RNA SFII helicase... 54 6e-06
UniRef50_A7SVK2 Cluster: Predicted protein; n=1; Nematostella ve... 54 6e-06
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 54 6e-06
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 54 6e-06
UniRef50_UPI0000D55FA1 Cluster: PREDICTED: similar to CG3561-PA;... 53 7e-06
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 53 7e-06
UniRef50_Q803D3 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 53 7e-06
UniRef50_Q8A8L3 Cluster: ATP-independent RNA helicase; n=7; Bact... 53 7e-06
UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 53 7e-06
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 53 7e-06
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 53 7e-06
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 53 7e-06
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 53 7e-06
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 53 7e-06
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 53 7e-06
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 53 7e-06
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 53 7e-06
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 53 7e-06
UniRef50_A4QX49 Cluster: ATP-dependent RNA helicase DBP7; n=1; M... 53 7e-06
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 53 1e-05
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 53 1e-05
UniRef50_Q9NUL7 Cluster: Probable ATP-dependent RNA helicase DDX... 53 1e-05
UniRef50_Q4P0Y5 Cluster: ATP-dependent RNA helicase DBP7; n=1; U... 53 1e-05
UniRef50_Q7S873 Cluster: ATP-dependent RNA helicase dbp-7; n=2; ... 53 1e-05
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 53 1e-05
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 52 1e-05
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 52 1e-05
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 52 1e-05
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 52 1e-05
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 52 1e-05
UniRef50_A2YDM1 Cluster: Putative uncharacterized protein; n=2; ... 52 1e-05
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 52 1e-05
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 52 1e-05
UniRef50_Q4QJE3 Cluster: ATP-dependent RNA helicase, putative; n... 52 1e-05
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 52 1e-05
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 52 1e-05
UniRef50_P90897 Cluster: Putative uncharacterized protein; n=2; ... 52 1e-05
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 52 1e-05
UniRef50_Q5KC99 Cluster: ATP-dependent RNA helicase MAK5; n=2; F... 52 1e-05
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 52 2e-05
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 52 2e-05
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 52 2e-05
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 52 2e-05
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 52 2e-05
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 52 2e-05
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 52 2e-05
UniRef50_A2E0F8 Cluster: DEAD/DEAH box helicase family protein; ... 52 2e-05
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 52 2e-05
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 52 2e-05
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 52 2e-05
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 52 2e-05
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 52 2e-05
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 52 2e-05
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 52 2e-05
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 52 2e-05
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 52 2e-05
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 52 2e-05
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 52 2e-05
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 52 2e-05
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 52 2e-05
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 52 2e-05
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 51 3e-05
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 51 3e-05
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 51 3e-05
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 51 3e-05
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 51 3e-05
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 51 3e-05
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 51 3e-05
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 51 3e-05
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 51 3e-05
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 51 3e-05
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 51 3e-05
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 51 3e-05
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 51 4e-05
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 51 4e-05
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 51 4e-05
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 51 4e-05
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 51 4e-05
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 51 4e-05
UniRef50_A4RXR7 Cluster: Predicted protein; n=3; Ostreococcus|Re... 51 4e-05
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 51 4e-05
UniRef50_A2EPC6 Cluster: Type III restriction enzyme, res subuni... 51 4e-05
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 156 bits (379), Expect = 5e-37
Identities = 70/88 (79%), Positives = 81/88 (92%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +GVAQTGSGKTLAY+LPA+VHINNQP + RGDGPIALVLAPTRELAQQIQQVA +FG
Sbjct: 195 RDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFG 254
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
++VRNTC+FGGAPK +QARDLERGVE
Sbjct: 255 SNTHVRNTCIFGGAPKGQQARDLERGVE 282
Score = 95.9 bits (228), Expect = 1e-18
Identities = 42/86 (48%), Positives = 58/86 (67%)
Frame = +2
Query: 254 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 433
+L PF KNFY P +VL R+ E E + ++E+T+ G +V P FEE FPDYV +
Sbjct: 113 NLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEI 172
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ G+ +PT IQAQGWPIAMSG++L+
Sbjct: 173 RKQGFAKPTAIQAQGWPIAMSGRDLV 198
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 153 bits (370), Expect = 7e-36
Identities = 70/86 (81%), Positives = 78/86 (90%)
Frame = +1
Query: 505 FIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 684
F+G+A+TGSGKTL YILPAIVHINNQ P++RGDGPIALVLAPTRELAQQIQQVA +FG +
Sbjct: 321 FVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSS 380
Query: 685 SYVRNTCVFGGAPKREQARDLERGVE 762
SYVRNTCVFGGAPK Q RDL+RG E
Sbjct: 381 SYVRNTCVFGGAPKGGQMRDLQRGCE 406
Score = 117 bits (282), Expect = 3e-25
Identities = 52/88 (59%), Positives = 61/88 (69%)
Frame = +2
Query: 248 FCSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQ 427
F +L PF KNFY HP V RSPYEV+ YR E+TV G +V NPIQ F E + PDYV +
Sbjct: 236 FSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVMK 294
Query: 428 GVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
++ GYK PT IQAQGWPIAMSG N +
Sbjct: 295 EIRRQGYKAPTAIQAQGWPIAMSGSNFV 322
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 140 bits (340), Expect = 3e-32
Identities = 67/107 (62%), Positives = 78/107 (72%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G + A + + + ++ +G+AQTGSGKTLAYI PA+VHI +Q +RRGDGPIALV
Sbjct: 141 GFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYIAPALVHITHQDQLRRGDGPIALV 200
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
LAPTRELAQQIQQVA DFG NTCVFGGAPK Q RDLERG E
Sbjct: 201 LAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLERGAE 247
Score = 73.7 bits (173), Expect = 5e-12
Identities = 32/85 (37%), Positives = 49/85 (57%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
L PF K+FY P + S +V+ Y E+T+ G + P FE+ PDY+ +
Sbjct: 79 LTPFEKDFYKPSEFISNLSETDVKGYLAKLEITLKGRNIPRPSMEFEQGGLPDYILEEAN 138
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
G+ +PT IQAQG PIA+SG++++
Sbjct: 139 KQGFSKPTAIQAQGMPIALSGRDMV 163
Score = 33.1 bits (72), Expect = 8.4
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3
Query: 744 LGEGSRIVIATPGRLIDFL 800
L G+ IVIATPGRLIDFL
Sbjct: 242 LERGAEIVIATPGRLIDFL 260
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 137 bits (331), Expect = 3e-31
Identities = 62/88 (70%), Positives = 73/88 (82%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A+TGSGKTLAYILPA++HI+NQP + RGDGPIALVLAPTRELAQQIQQV DFG
Sbjct: 139 RDMVGIAKTGSGKTLAYILPALIHISNQPRLLRGDGPIALVLAPTRELAQQIQQVCNDFG 198
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ NTC+FGGA K QA DL RGVE
Sbjct: 199 RRMSIMNTCIFGGASKHPQADDLRRGVE 226
Score = 80.2 bits (189), Expect = 6e-14
Identities = 37/85 (43%), Positives = 55/85 (64%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
L+PF K+F+ P +VL+RS EV +Y + +E+T+ G V PI F E+ FP +
Sbjct: 58 LEPFKKDFFTPASSVLERSRTEVCQYLDKNEITMIGKNVPAPIMQFGESGFPSVFLDEMG 117
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
G++EPT IQA GW IAMSG++++
Sbjct: 118 RQGFQEPTSIQAVGWSIAMSGRDMV 142
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 130 bits (313), Expect = 5e-29
Identities = 57/88 (64%), Positives = 72/88 (81%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKT+AY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A FG
Sbjct: 134 RDLIGIAETGSGKTIAYLLPAIVHVNAQPILDHGDGPIVLVLAPTRELAVQIQQEATKFG 193
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+S ++NTC++GG PK Q RDL++GVE
Sbjct: 194 ASSRIKNTCIYGGVPKGPQVRDLQKGVE 221
Score = 102 bits (244), Expect = 1e-20
Identities = 45/94 (47%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Frame = +2
Query: 233 SPR-LGFCSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANF 409
SPR + L PF KNFY P++ + EVEEYR E+T+ G +V PI+ F + F
Sbjct: 44 SPRKVNLDDLPPFEKNFYVESPSIAAMTEGEVEEYRRRREITIEGRDVPKPIKSFHDVGF 103
Query: 410 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
PDYV Q ++ G+ EPTPIQAQGWP+A+ G++L+
Sbjct: 104 PDYVLQEIEKAGFTEPTPIQAQGWPMALKGRDLI 137
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 128 bits (308), Expect = 2e-28
Identities = 55/88 (62%), Positives = 73/88 (82%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A+TGSGKTL+Y+LPA++HI+ Q +RRGDGPIAL+LAPTRELAQQI+QV DFG
Sbjct: 125 RDMVGIAKTGSGKTLSYLLPALMHIDQQSRLRRGDGPIALILAPTRELAQQIKQVTDDFG 184
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
++NTC+FGG KR+Q DL+ GVE
Sbjct: 185 RAMKIKNTCLFGGGAKRQQGDDLKYGVE 212
Score = 67.3 bits (157), Expect = 4e-10
Identities = 29/69 (42%), Positives = 43/69 (62%)
Frame = +2
Query: 305 KRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 484
+RS E+ E+R E+T G +V +P FEE FP + + + PTPIQ+QGWP
Sbjct: 60 RRSEREISEWRKTKEITTKGRDVPDPALTFEEVGFPAEIADEWRYAEFTTPTPIQSQGWP 119
Query: 485 IAMSGKNLL 511
IAMSG++++
Sbjct: 120 IAMSGRDMV 128
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 126 bits (305), Expect = 5e-28
Identities = 60/90 (66%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+AQTGSGKTLAY+LP IVHI +Q P++RG+GP+ LVLAPTRELAQQIQ V DFG
Sbjct: 267 RDLVGIAQTGSGKTLAYMLPGIVHIAHQKPLQRGEGPVVLVLAPTRELAQQIQTVVRDFG 326
Query: 679 HTS--YVRNTCVFGGAPKREQARDLERGVE 762
S +R TC+FGGA K Q RDLERGVE
Sbjct: 327 THSKPLIRYTCIFGGALKGPQVRDLERGVE 356
Score = 107 bits (257), Expect = 3e-22
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
L+PF K+FY PHP V+ R+P EV+ +R ++TV G V +P Q FEE NFPD+V +
Sbjct: 186 LEPFEKDFYVPHPNVMARTPEEVQAFRERMQITVMGNSVPHPSQDFEEGNFPDFVMNEIN 245
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
MG+ PT IQAQGWPIA+SG++L+
Sbjct: 246 KMGFPNPTAIQAQGWPIALSGRDLV 270
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 124 bits (300), Expect = 2e-27
Identities = 55/88 (62%), Positives = 69/88 (78%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+AQTGSGKTL+Y+LP +VH+ QP + +GDGPI L+LAPTRELA QIQQ + FG
Sbjct: 289 RDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGKFG 348
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
S R+TC++GGAPK Q RDL RGVE
Sbjct: 349 SYSRTRSTCIYGGAPKGPQIRDLRRGVE 376
Score = 106 bits (254), Expect = 7e-22
Identities = 44/92 (47%), Positives = 62/92 (67%)
Frame = +2
Query: 236 PRLGFCSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 415
P+ F SL PF KNFY P V S +V +YR ++TV G +V P++YF+EANFPD
Sbjct: 201 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 260
Query: 416 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
Y Q + G+ EPTPIQ+QGWP+A+ G++++
Sbjct: 261 YCMQAIAKSGFVEPTPIQSQGWPMALKGRDMI 292
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 124 bits (300), Expect = 2e-27
Identities = 57/88 (64%), Positives = 68/88 (77%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A+TGSGKTL Y LP+IVHIN QP + GDGPI LVLAPTRELA QIQ+ FG
Sbjct: 172 RDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFG 231
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+S +RNTCV+GG PK Q RDL RGVE
Sbjct: 232 RSSRIRNTCVYGGVPKGPQIRDLSRGVE 259
Score = 96.3 bits (229), Expect = 8e-19
Identities = 43/103 (41%), Positives = 64/103 (62%)
Frame = +2
Query: 254 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 433
SL F K+FY HP V RS +VE +R H++T++G V P++ F+EA FP YV V
Sbjct: 90 SLPKFEKSFYKEHPDVETRSDADVEAFRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEV 149
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLLA*LKRVPAKRWPTSCQP 562
K G+ PT IQ+QGWP+A+SG++++ + + + T C P
Sbjct: 150 KAQGFPAPTAIQSQGWPMALSGRDVVG-IAETGSGKTLTYCLP 191
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 113 bits (272), Expect = 5e-24
Identities = 53/88 (60%), Positives = 68/88 (77%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLA++LPAIVHIN Q +R GDGPI LVLAPTRELA+QI++ A FG
Sbjct: 248 RDMIGIAETGSGKTLAFLLPAIVHINAQALLRPGDGPIVLVLAPTRELAEQIKETALVFG 307
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+S ++ + +GG PKR Q L RGVE
Sbjct: 308 RSSKLKTSVAYGGVPKRFQTIALRRGVE 335
Score = 84.6 bits (200), Expect = 3e-15
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTV-SGVEVHNPIQYFEEANFPDYVQQGV 433
L F KNFY HP V + E +E R E+TV G +V P+ FE +FP Y+ +
Sbjct: 166 LVKFEKNFYVEHPEVKAMTQQEADEIRRAKEITVVHGRDVPKPVVKFEYTSFPRYILSSI 225
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ G+KEPTPIQ Q WPIA+SG++++
Sbjct: 226 EAAGFKEPTPIQVQSWPIALSGRDMI 251
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 112 bits (269), Expect = 1e-23
Identities = 50/87 (57%), Positives = 66/87 (75%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG+AQTGSGKTL+++LPA+VHIN Q P++ G+GPIALVLAPTRELA QIQ+ FG
Sbjct: 252 DLIGIAQTGSGKTLSFMLPALVHINAQDPVKPGEGPIALVLAPTRELANQIQEQCFKFGS 311
Query: 682 TSYVRNTCVFGGAPKREQARDLERGVE 762
+ + CV+GGAPK Q ++L G +
Sbjct: 312 KCKISSVCVYGGAPKIYQEKELRNGCD 338
Score = 40.3 bits (90), Expect = 0.055
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGV--EVHNPIQYFEEANFPDYVQQG 430
L+PF K FY ++ + E+ Y+ + + EV P + E FP Y+
Sbjct: 151 LKPFQKVFYQVGKSI--HTDEEIATYQREKGIIIRSKHKEVPQPFIKWNETKFPKYIMSV 208
Query: 431 VKTMGYKEPTPIQAQ 475
++ + EP PIQAQ
Sbjct: 209 IEDSKFSEPMPIQAQ 223
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 111 bits (266), Expect = 3e-23
Identities = 53/87 (60%), Positives = 64/87 (73%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ IG A+TGSGKTLA+ILPA VHI QP ++ GDGPI LVLAPTRELA+QI+Q F
Sbjct: 151 KDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFS 210
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGV 759
S +RNTC +GG PK Q L++GV
Sbjct: 211 TESKIRNTCAYGGVPKSGQIYALKQGV 237
Score = 86.2 bits (204), Expect = 8e-16
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +2
Query: 254 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTV-SGVEVHNPIQYFEEANFPDYVQQG 430
+L PF KNFY H + K S EV+E R+ H++T+ G V P+ + FPDYV +
Sbjct: 68 NLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKPVVSINKIGFPDYVIKS 127
Query: 431 VKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+K PTPIQ QGWPIA+SGK+++
Sbjct: 128 LKNNNIVAPTPIQIQGWPIALSGKDMI 154
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 111 bits (266), Expect = 3e-23
Identities = 49/87 (56%), Positives = 64/87 (73%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG+A+TGSGKTL ++LPA++HI QP +R GDGPI LVLAPTREL +QI++ A FG
Sbjct: 27 DMIGIAETGSGKTLGFLLPAMIHIRAQPLLRYGDGPICLVLAPTRELVEQIREQANQFGS 86
Query: 682 TSYVRNTCVFGGAPKREQARDLERGVE 762
+RNT ++GG PKR Q + GVE
Sbjct: 87 IFKLRNTAIYGGVPKRPQQASIRNGVE 113
Score = 35.1 bits (77), Expect = 2.1
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +2
Query: 452 EPTPIQAQGWPIAMSGKNLL 511
EPT IQ QGWP+A+SG +++
Sbjct: 10 EPTAIQVQGWPVALSGHDMI 29
>UniRef50_Q17BQ3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 154
Score = 110 bits (265), Expect = 3e-23
Identities = 53/104 (50%), Positives = 75/104 (72%)
Frame = +1
Query: 427 RCKDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 606
RC G+ +++ +RLA Y+ +G+ +TGSGKTL+Y+LPA++ I+ Q +RRGDG
Sbjct: 17 RCL-RGVNHSNSDPVARLASRYM----VGITKTGSGKTLSYLLPALMPIDEQSRLRRGDG 71
Query: 607 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 738
PIAL+LAPTRELAQQI+QV DFG ++N C+FGG+ KR +
Sbjct: 72 PIALILAPTRELAQQIKQVTDDFGRAIKIKNICLFGGSAKRRSS 115
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 110 bits (264), Expect = 5e-23
Identities = 48/87 (55%), Positives = 69/87 (79%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG+A+TGSGKTL+++LP+IVHIN QP +++GDGPI LVLAPTRELA QI++ + FG
Sbjct: 140 DLIGIAETGSGKTLSFLLPSIVHINAQPTVKKGDGPIVLVLAPTRELAMQIERESERFGK 199
Query: 682 TSYVRNTCVFGGAPKREQARDLERGVE 762
+S ++ C++GGA K Q L++GV+
Sbjct: 200 SSKLKCACIYGGADKYSQRALLQQGVD 226
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 SLQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTVSGV-EVHNPIQYFEEANFPDYVQQ 427
+L F K FY + R+ E+EE YR NH S +V +P + + +FP Y+
Sbjct: 57 NLTTFQKVFYKESQKI--RTEEEIEEFYRQNHISAKSPHGKVPDPFLSWTDTHFPQYIMN 114
Query: 428 GVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
V +++P+PIQ+ +P+ +SG +L+
Sbjct: 115 EVTHAKFEKPSPIQSLAFPVVLSGHDLI 142
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 107 bits (258), Expect = 2e-22
Identities = 49/88 (55%), Positives = 65/88 (73%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+AQTGSGKTL++ILPA+VH +Q P+RRGDGPI LVLAPTREL QI++V +F
Sbjct: 125 RDMVGIAQTGSGKTLSFILPALVHAKDQQPLRRGDGPIVLVLAPTRELVMQIKKVVDEFC 184
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R+T V+GGA + Q R L G E
Sbjct: 185 GMFNLRSTAVYGGASSQPQIRALHEGAE 212
Score = 81.8 bits (193), Expect = 2e-14
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 445
F KNFY ++ + +P EV +R +E+ V G V +PIQ FEEA F V + G
Sbjct: 47 FQKNFYQEAESISRMTPSEVSSFRKTNEMIVKGTNVPHPIQKFEEAGFSSEVVSSLVEKG 106
Query: 446 YKEPTPIQAQGWPIAMSGKNLL 511
+ EPT IQ QGWP+A+SG++++
Sbjct: 107 FSEPTAIQGQGWPMALSGRDMV 128
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 107 bits (256), Expect = 4e-22
Identities = 52/104 (50%), Positives = 69/104 (66%)
Frame = +1
Query: 436 DNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 615
DN ++ S + + + IG+A+TGSGKT A+++PA+VHI Q P+ RGDGPI
Sbjct: 142 DNKWEKPTPIQSVSIPVALKGHDLIGIAKTGSGKTAAFLIPAMVHIGLQEPMYRGDGPIV 201
Query: 616 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL 747
LVL+PTRELAQQI +VA F +R TC+FGGA + QA DL
Sbjct: 202 LVLSPTRELAQQIAEVAKGFCDNLMIRQTCLFGGAGRGPQANDL 245
Score = 43.2 bits (97), Expect = 0.008
Identities = 18/64 (28%), Positives = 37/64 (57%)
Frame = +2
Query: 320 EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 499
E ++ ++ + + +V +P FEE N PD + + + +++PTPIQ+ P+A+ G
Sbjct: 103 EQVQFLKSNAIKLLASDVPSPALTFEELNLPDTITKTITDNKWEKPTPIQSVSIPVALKG 162
Query: 500 KNLL 511
+L+
Sbjct: 163 HDLI 166
>UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=6; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 502
Score = 99 bits (238), Expect = 6e-20
Identities = 47/88 (53%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQ-QVAADF 675
++ +GVA+TGSGKT+A+++PA +HI QPP++ GDGPIALVLAPTRELA QI+ +
Sbjct: 183 RDIVGVAKTGSGKTMAFMIPAALHIMAQPPLQPGDGPIALVLAPTRELAVQIETETRKAL 242
Query: 676 GHTSYVRNTCVFGGAPKREQARDLERGV 759
+ TCV+GG PK Q R L GV
Sbjct: 243 TRVPSIMTTCVYGGTPKGPQQRALRAGV 270
Score = 53.6 bits (123), Expect = 6e-06
Identities = 23/79 (29%), Positives = 42/79 (53%)
Frame = +2
Query: 275 NFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKE 454
NFY P RS E+ + + +T+ G V P+ F + PD + Q G+++
Sbjct: 111 NFYKPQKP---RSEEEIATWLRENSITIYGDRVPQPMLEFSDLVAPDAIHQAFMDAGFQK 167
Query: 455 PTPIQAQGWPIAMSGKNLL 511
PTPIQ+ WP+ ++ ++++
Sbjct: 168 PTPIQSVSWPVLLNSRDIV 186
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 98.7 bits (235), Expect = 1e-19
Identities = 45/88 (51%), Positives = 61/88 (69%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVA+TGSGKT+A++LP HI +QPP++ DGPI L++ PTRELA QI + F
Sbjct: 635 RDVIGVAKTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIMTPTRELAVQIHKDCKPFL 694
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R C +GGAP REQ +L+RG E
Sbjct: 695 KMMGLRAVCAYGGAPIREQIAELKRGAE 722
Score = 49.6 bits (113), Expect = 9e-05
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGV 433
++P KNF+ + + EV + R + + V+G +V P+Q + + V
Sbjct: 553 IEPIRKNFWHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVV 612
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
+GY++PTPIQ Q P MSG++++
Sbjct: 613 DNLGYEKPTPIQMQALPALMSGRDVI 638
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 97.5 bits (232), Expect = 3e-19
Identities = 45/88 (51%), Positives = 60/88 (68%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A FG
Sbjct: 144 RDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFG 203
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ VFGG K EQ++ L+ G E
Sbjct: 204 KAYNIHVVAVFGGGNKYEQSKALQEGAE 231
Score = 72.9 bits (171), Expect = 8e-12
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+PFNKNFY+ HP + K+S E+++ R + VSG P F F + + ++
Sbjct: 64 KPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRK 123
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA*LK----RVPAKRWP 547
+ Y +PT IQ Q PIA+SG++++ K + A WP
Sbjct: 124 LEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWP 163
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 97.1 bits (231), Expect = 5e-19
Identities = 46/88 (52%), Positives = 61/88 (69%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + +A+TGSGKTL Y+LP +HI R GP LVLAPTRELA QI + A FG
Sbjct: 188 QDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRS-GPTVLVLAPTRELATQILEEAVKFG 246
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+S + +TC++GGAPK Q RDL+RGV+
Sbjct: 247 RSSRISSTCLYGGAPKGPQLRDLDRGVD 274
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = +2
Query: 326 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
E YR+ HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+ ++
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 506 LLA 514
++A
Sbjct: 190 VVA 192
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 97.1 bits (231), Expect = 5e-19
Identities = 42/88 (47%), Positives = 61/88 (69%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVA+TGSGKTL+++LP + HI +QPP+RRGDGPI L++ PTRELA QI + F
Sbjct: 355 RDIIGVAKTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIGLIMTPTRELALQIHKELNHFT 414
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ + C FGG+ Q +L++G +
Sbjct: 415 KKLNISSCCCFGGSSIESQIAELKKGAQ 442
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK- 436
PF K+FY +LK EV R + + V GV PI + + P + ++
Sbjct: 274 PFRKDFYTEPTEILKLPEEEVANLRLKLDGIRVRGVNCTRPIIRWSQLGLPSTIMSIIEG 333
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
+ Y P+ IQAQ P MSG++++
Sbjct: 334 RLNYSSPSSIQAQAIPAIMSGRDII 358
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 97.1 bits (231), Expect = 5e-19
Identities = 43/88 (48%), Positives = 62/88 (70%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVA+TGSGKT+A++LP HI +Q P++ G+GPIA+++ PTRELA QI + F
Sbjct: 456 RDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFL 515
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R C +GGAP ++Q DL+RG E
Sbjct: 516 KLLNIRACCAYGGAPIKDQIADLKRGAE 543
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
+ F K+FY + SP EV+E R + + + + G++ P+ + + +
Sbjct: 375 EDFKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTISVIN 434
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
++GY++PT IQAQ P SG++++
Sbjct: 435 SLGYEKPTSIQAQAIPAITSGRDVI 459
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 96.7 bits (230), Expect = 6e-19
Identities = 47/85 (55%), Positives = 60/85 (70%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ +G+A TGSGKTLA+ +PA+ I++QPP + G PI LVLAPTRELAQQ +V D G
Sbjct: 66 DMVGIAATGSGKTLAFGMPALTQIHSQPPCKPGQ-PICLVLAPTRELAQQTAKVFDDAGE 124
Query: 682 TSYVRNTCVFGGAPKREQARDLERG 756
S VR CV+GGAPK EQ ++ G
Sbjct: 125 ASGVRCVCVYGGAPKYEQKAQMKAG 149
Score = 40.7 bits (91), Expect = 0.042
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +2
Query: 311 SPYEVEEYRNNHEVT-VSGVEVH-NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 484
S EV+ R+ VT V G+ P+ F +A F + + T +K P+PIQAQ WP
Sbjct: 2 SASEVQAARDALAVTQVDGLSTDLAPVSSFADAGFSKELLR--VTAQFKTPSPIQAQSWP 59
Query: 485 IAMSGKNLL 511
I MSG +++
Sbjct: 60 IIMSGHDMV 68
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 95.1 bits (226), Expect = 2e-18
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVA+TGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL QQI F
Sbjct: 567 RDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFS 626
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R V+GG+ +Q +L+RG E
Sbjct: 627 KPLGIRCVPVYGGSGVAQQISELKRGTE 654
Score = 63.3 bits (147), Expect = 7e-09
Identities = 28/84 (33%), Positives = 46/84 (54%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+PF KNFY + + + EV YR E+ V G +V PI+++ + + +K
Sbjct: 487 EPFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKK 546
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+ Y++P PIQ Q PI MSG++ +
Sbjct: 547 LNYEKPMPIQTQALPIIMSGRDCI 570
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 94.7 bits (225), Expect = 2e-18
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFA 401
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
++ C +GG EQ DL+RG E
Sbjct: 402 KPLGLKVACTYGGVGISEQIADLKRGAE 429
Score = 50.0 bits (114), Expect = 7e-05
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 442
F KNFY + + + EV+ YR + +TV G++ PI+ + + + +K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 443 GYKEPTPIQAQGWPIAMSGKNLL 511
Y +PT IQAQ P MSG++++
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRDVI 345
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 93.9 bits (223), Expect = 4e-18
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + VA+TGSGKTL Y++P + + R DGP LVL+PTRELA QIQ A FG
Sbjct: 269 RDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTRELATQIQDEAKKFG 327
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+S + + C++GGAPK Q RDLERG +
Sbjct: 328 RSSRISSVCLYGGAPKGPQLRDLERGAD 355
Score = 38.7 bits (86), Expect = 0.17
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 407 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F + V+ G+ PTPIQAQ WPIA+ ++++A
Sbjct: 238 FKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVA 273
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 93.5 bits (222), Expect = 6e-18
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLAY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A FG
Sbjct: 131 RDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFG 190
Score = 91.1 bits (216), Expect = 3e-17
Identities = 39/85 (45%), Positives = 55/85 (64%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
L F KNFY P+V + EVE YR E+TV G +V P++ F + FP+YV Q +
Sbjct: 50 LPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEIT 109
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
G+ EPTPIQ+QGWP+A+ G++L+
Sbjct: 110 KAGFVEPTPIQSQGWPMALRGRDLI 134
>UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 971
Score = 93.1 bits (221), Expect = 7e-18
Identities = 42/88 (47%), Positives = 59/88 (67%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLA++LP + HI +QPP+ GDGPI L++APTREL QQI F
Sbjct: 522 RDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVMPGDGPIGLIMAPTRELVQQIHSDIKKFA 581
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ V+GG+ +Q +L+RG E
Sbjct: 582 KVVGISCVPVYGGSGVAQQISELKRGAE 609
Score = 62.5 bits (145), Expect = 1e-08
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+PF KNFY + +P E+ YR E+ + G +V P++ + + + +K
Sbjct: 442 KPFRKNFYIEVKESARMTPEEIAAYRKQLELKIHGKDVPKPVKTWHQTGLTTKILDTIKK 501
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+ Y+ P PIQAQ PI MSG++ +
Sbjct: 502 LNYERPMPIQAQALPIIMSGRDCI 525
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 93.1 bits (221), Expect = 7e-18
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++FIG+A+TGSGKTLAY+LP + H+ +QP ++ GDGPIA+++APTRELA QI F
Sbjct: 542 RDFIGIAETGSGKTLAYLLPLLRHVLDQPALKDGDGPIAIIMAPTRELAHQIYVNCRWFT 601
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ C GGA Q DL+RG E
Sbjct: 602 SILNLNVVCCVGGAGIAGQLSDLKRGTE 629
Score = 47.2 bits (107), Expect = 5e-04
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNN-HEVTVSGVEVHNPIQYFEEANFPDYVQQG-V 433
QPF K+FY +++ +P E ++ R ++ V G +V PIQ + + D V +
Sbjct: 460 QPFRKDFYREVSELVQMTPEEAKKLRQQLGDIKVRGKDVPKPIQNWYQCGLNDRVLNVLI 519
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ + P PIQAQ P MSG++ +
Sbjct: 520 EKKKFINPFPIQAQAVPCIMSGRDFI 545
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 92.7 bits (220), Expect = 1e-17
Identities = 42/88 (47%), Positives = 59/88 (67%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVA+TGSGKT+A++LP HI +Q P++ DGPI L++ PTRELA QI + F
Sbjct: 592 RDVIGVAKTGSGKTIAFLLPMFRHIRDQRPLKGSDGPIGLIMTPTRELATQIHKECKPFL 651
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R C +GGA ++Q DL+RG E
Sbjct: 652 KAMGLRAVCAYGGAIIKDQIADLKRGAE 679
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGV 433
L PF KNFY + + + E+ + R + + V+G +V P+Q + + +
Sbjct: 510 LPPFRKNFYTEPTELAEMTEAEIADLRLELDGIKVAGKDVPKPVQKWSQCGLDVKSLDVI 569
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
+GY+ PT IQ Q P MSG++++
Sbjct: 570 TKLGYERPTSIQMQAIPAIMSGRDVI 595
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 92.7 bits (220), Expect = 1e-17
Identities = 43/88 (48%), Positives = 61/88 (69%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKT A++LP IVHI +QP ++R +GPI ++ APTRELA QI A F
Sbjct: 266 RDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFS 325
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R + V+GG K EQ ++L+ G E
Sbjct: 326 KAYGLRVSAVYGGMSKHEQFKELKAGCE 353
Score = 71.7 bits (168), Expect = 2e-11
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+P NK+FY+ ++ + E +YR + VSG +VH P++ FE+ F + +K
Sbjct: 186 EPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKK 245
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
Y++PT IQ Q PI +SG++++
Sbjct: 246 QAYEKPTAIQCQALPIVLSGRDVI 269
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 92.3 bits (219), Expect = 1e-17
Identities = 45/89 (50%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G A+TGSGKT A+ +P + H QPPIRRGDGP+ALVLAPTRELAQQI++ F
Sbjct: 156 RDLLGCAETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFS 215
Query: 679 HT-SYVRNTCVFGGAPKREQARDLERGVE 762
+ ++N V GG +Q +L GVE
Sbjct: 216 RSLESLKNCIVVGGTNIEKQRSELRAGVE 244
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Frame = +2
Query: 281 YDPHPTVLKRSPYEVEEY-RNNHEVTVSG--VEVHNPIQYFEEANFPDYVQQGVKTMGYK 451
+ P V + +P ++EE R N +VTVS PI+ F + + + + Y
Sbjct: 80 WQPSERVSRMNPDQIEEVVRLNLDVTVSSDSTAAPGPIESFNDMCLHPSIMKDIAYHEYT 139
Query: 452 EPTPIQAQGWPIAMSGKNLL 511
P+ IQAQ PIA+SG++LL
Sbjct: 140 RPSSIQAQAMPIALSGRDLL 159
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 91.9 bits (218), Expect = 2e-17
Identities = 43/88 (48%), Positives = 58/88 (65%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVA+TGSGKTL ++LP + HI +QPP+ GDGPI LV+APTREL QQI F
Sbjct: 434 RDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFS 493
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ V+GG+ +Q +L+RG E
Sbjct: 494 KALGIICVPVYGGSGVAQQISELKRGTE 521
Score = 63.7 bits (148), Expect = 5e-09
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+PF KNFY + + + V YR E+ V G +V PIQ++ + + +K
Sbjct: 354 EPFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKK 413
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+ Y++P PIQAQ PI MSG++ +
Sbjct: 414 LNYEKPMPIQAQALPIIMSGRDCI 437
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 91.9 bits (218), Expect = 2e-17
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +GVA+TGSGKTL +++PA+ HI Q P+R GDGP+ +VLAPTRELAQQI++
Sbjct: 140 RDLVGVAKTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVLAPTRELAQQIEEETKKV- 198
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGV 759
V CV+GGAPK Q L RGV
Sbjct: 199 IPGDVYCGCVYGGAPKGPQLGLLRRGV 225
Score = 50.0 bits (114), Expect = 7e-05
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 293 PTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEE--ANFPDYVQQGVKTMGYKEPTPI 466
P + S E ++R H +T+ G + P+ F+ P Y+ + + + PTP+
Sbjct: 69 PEAGQLSEEEATKWREEHVITIFGDDCPPPMSSFDHLCGIVPPYLLKKLTAQNFTAPTPV 128
Query: 467 QAQGWPIAMSGKNLL 511
QAQ WP+ +SG++L+
Sbjct: 129 QAQSWPVLLSGRDLV 143
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 91.5 bits (217), Expect = 2e-17
Identities = 43/88 (48%), Positives = 59/88 (67%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLA+ILP HI +QP + GDG IA+++APTREL QI + F
Sbjct: 548 RDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFS 607
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ +R CV+GG EQ +L+RG E
Sbjct: 608 KSLGLRPVCVYGGTGISEQIAELKRGAE 635
Score = 58.4 bits (135), Expect = 2e-07
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
PF KNFY P + + + +VE+YR++ E + V G PI+ + + + ++
Sbjct: 468 PFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRR 527
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+G+++PTPIQ Q P MSG++L+
Sbjct: 528 LGFEKPTPIQCQAIPAIMSGRDLI 551
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/88 (46%), Positives = 58/88 (65%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKT A+I P ++HI +Q + GDGPIA+++ PTREL QQI FG
Sbjct: 291 RDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFG 350
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R+ V+GG EQA+ L+ G E
Sbjct: 351 KAYNLRSVAVYGGGSMWEQAKALQEGAE 378
Score = 64.5 bits (150), Expect = 3e-09
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 442
PF KNFY+ H + +P ++ + R+ + VSG P F F + + ++
Sbjct: 212 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 271
Query: 443 GYKEPTPIQAQGWPIAMSGKNLL 511
Y +PTPIQ QG P+A+SG++++
Sbjct: 272 EYTQPTPIQCQGVPVALSGRDMI 294
>UniRef50_Q013X8 Cluster: DEAD/DEAH box RNA helicase; n=1;
Ostreococcus tauri|Rep: DEAD/DEAH box RNA helicase -
Ostreococcus tauri
Length = 507
Score = 91.1 bits (216), Expect = 3e-17
Identities = 45/89 (50%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A TGSGKTLA++LPA I+ Q P+R+ +GP+ALVLAPTRELA QI A F
Sbjct: 141 RDALGLATTGSGKTLAFLLPAYAQISRQRPLRKKEGPMALVLAPTRELATQIANEANAFN 200
Query: 679 HTSYVRNTC-VFGGAPKREQARDLERGVE 762
C +FGGA K EQ + L G E
Sbjct: 201 RAGVPARCCAIFGGASKHEQLKRLRAGAE 229
Score = 36.7 bits (81), Expect = 0.68
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 323 VEEYRNNHEVTVSGVEVHNPIQYFEEANFPD-YVQQGVKTMGYKEPTPIQAQGWPIAMSG 499
VE R +V V G E P++ F + D + + +K +GY+ PT IQAQ P+ G
Sbjct: 82 VEARREALDVRVDG-ETRAPVERFGQGGALDVHAIRALKRLGYETPTGIQAQCIPVICGG 140
Query: 500 KNLL 511
++ L
Sbjct: 141 RDAL 144
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 91.1 bits (216), Expect = 3e-17
Identities = 39/84 (46%), Positives = 59/84 (70%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F
Sbjct: 303 RDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFC 362
Query: 679 HTSYVRNTCVFGGAPKREQARDLE 750
+ C +GG K EQ+ +L+
Sbjct: 363 KVYNINPICAYGGGSKWEQSNELQ 386
Score = 62.1 bits (144), Expect = 2e-08
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA*LK----RVPAKRWP 547
Y++PTPIQA P A+SG+++L K + A WP
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322
>UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5464,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 307
Score = 90.6 bits (215), Expect = 4e-17
Identities = 40/85 (47%), Positives = 55/85 (64%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
L F KNFY H V + S +EVEEYR E+T+ G PI F +A+FP YV +
Sbjct: 43 LPKFEKNFYTEHLEVERTSQFEVEEYRRKKEITIRGTGCPKPIIKFHQAHFPQYVMDVLM 102
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
+KEPTPIQAQG+P+A+SG++++
Sbjct: 103 QQNFKEPTPIQAQGFPLALSGRDMV 127
Score = 34.3 bits (75), Expect = 3.6
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +3
Query: 555 ASHCAHKQPTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTHILCS*HVCVWWCS*KRA 734
A +CAH+ W+ FG G ++ + SA R + H+ V C+ +
Sbjct: 173 ACYCAHQPSALLGAWRWTHMFGFGPHEGIGPAGSAGSIRLRKVLTHQKHLRVRRCAEGTS 232
Query: 735 SPGLGE 752
+PG GE
Sbjct: 233 NPGSGE 238
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 90.6 bits (215), Expect = 4e-17
Identities = 42/88 (47%), Positives = 58/88 (65%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLAYILP + HIN Q P++ GDGPI +++ PTREL QI + A +G
Sbjct: 368 RDCIGIAKTGSGKTLAYILPMLRHINAQEPLKNGDGPIGMIMGPTRELVTQIGKEAKRYG 427
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
V+GG+ Q +L+RG E
Sbjct: 428 KALGFNAVSVYGGSGIAAQIGELKRGAE 455
Score = 43.6 bits (98), Expect = 0.006
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
+P K+FY + + + R + + G +V PI+ + A + + ++
Sbjct: 287 EPVKKDFYIESKEISSMTKAQTRALRAELDGIKCRGKKVPKPIKTWAHAGLSGRIHELIR 346
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
G+++P PIQAQ P+ MSG++ +
Sbjct: 347 RCGFEKPMPIQAQALPVIMSGRDCI 371
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 90.6 bits (215), Expect = 4e-17
Identities = 42/88 (47%), Positives = 61/88 (69%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + +A+TGSGKTL Y++PA + + + R +GP L+LAPTRELA QIQ A FG
Sbjct: 473 RDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSR-NGPTVLILAPTRELATQIQDEALRFG 531
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+S + TC++GGAPK Q ++LERG +
Sbjct: 532 RSSRISCTCLYGGAPKGPQLKELERGAD 559
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Frame = +2
Query: 269 NKNFYDPH----PTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
NK+ PH P V SP E+ YR HEVT +G + P FE + P + + +
Sbjct: 394 NKSLVRPHFVTSPDVPHLSPVEI--YRKQHEVTTTGENIPAPYITFESSGLPPEILRELL 451
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLLA 514
+ G+ PTPIQAQ WPIA+ ++++A
Sbjct: 452 SAGFPSPTPIQAQTWPIALQSRDIVA 477
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 90.2 bits (214), Expect = 5e-17
Identities = 40/88 (45%), Positives = 60/88 (68%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ I +A+TGSGKTL+Y+ P I H+ +QPP+R DGPIA++L PTREL++Q++ A +
Sbjct: 707 RDVIAIAETGSGKTLSYLFPLIRHVLHQPPLRNNDGPIAIILTPTRELSKQVKSEARPYC 766
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R V+GG+ Q L+RGVE
Sbjct: 767 QAVNLRILAVYGGSNIGTQLNTLKRGVE 794
Score = 42.3 bits (95), Expect = 0.014
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
P KN Y + +V+ +R NN + V G P+QYF + P + ++
Sbjct: 627 PIKKNIYVQVSEITNMKESDVDLFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILPILER 686
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA 514
+K+ IQ Q P M G++++A
Sbjct: 687 KQFKKMFGIQMQTIPALMCGRDVIA 711
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/88 (48%), Positives = 56/88 (63%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVA+TGSGKTLAYILP + HIN Q P+ GDGPI +++ PTREL QI + +G
Sbjct: 155 RDCIGVAKTGSGKTLAYILPMLRHINAQEPLASGDGPIGMIMGPTRELVTQIGKDCKRYG 214
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
V+GG+ Q DL+RG E
Sbjct: 215 KAMGFSAVSVYGGSGIAAQIGDLKRGAE 242
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
+P KNFY + + EV++ R + + G +V PI+ + +A + V + ++
Sbjct: 74 EPVKKNFYIEAKEIASMTKAEVKQLRVELDGIKCRGKKVPKPIKTWAQAGLNNRVHELIR 133
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
G+++P PIQAQ P+ MSG++ +
Sbjct: 134 RSGFEKPMPIQAQALPVIMSGRDCI 158
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 88.6 bits (210), Expect = 2e-16
Identities = 42/88 (47%), Positives = 58/88 (65%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLA++LPAI H +QP +R DG I LV+APTREL QI ++ F
Sbjct: 406 RDVIGIAETGSGKTLAFLLPAIRHALDQPSLRENDGMIVLVIAPTRELVIQISNESSKFS 465
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
++ ++GGA EQ L+RG E
Sbjct: 466 RAVGLKTLAIYGGAGIGEQLNALKRGAE 493
Score = 52.8 bits (121), Expect = 1e-05
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Frame = +2
Query: 236 PRLGFCSLQ--PFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVEVHNPIQYFEEAN 406
PR+ ++ PF KNFY ++ +EV+ +R N + V G + PI F +
Sbjct: 315 PRVDHTKIEYLPFRKNFYVQVSSITNMGEHEVDAFRRANGNIRVYGKKCPRPISSFSQCG 374
Query: 407 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
PD + + ++ Y+ P PIQ Q P M G++++
Sbjct: 375 LPDPILKILEKREYERPFPIQMQCIPALMCGRDVI 409
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 88.6 bits (210), Expect = 2e-16
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG+AQTGSGKT+AY+LP +VHI +Q R+ GP+ L+L PTRELA QIQ+ + F
Sbjct: 110 DLIGIAQTGSGKTIAYLLPGLVHIESQ---RKKGGPMMLILVPTRELAMQIQEHISYFSE 166
Query: 682 TSYVRNTCVFGGAPKREQARDLER 753
+ + C++GGA KR Q L R
Sbjct: 167 AYNMNSACIYGGADKRPQEMALAR 190
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Frame = +2
Query: 221 SEHASPRLGFCSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTV--SGVEVHNPIQYF 394
S++A P++ + P K F DP + + V EY + H + V + ++V P +
Sbjct: 19 SQYAKPQI---NSTPIQKVFIDPTQRIYE--DIVVSEYLDEHSIVVEQNDIQVPQPFIEW 73
Query: 395 EEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
++ FP+ + + + Y PTPIQA +PI MSG +L+
Sbjct: 74 KDCQFPNQLNKRISLKAYNRPTPIQASVFPIIMSGHDLI 112
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/87 (48%), Positives = 60/87 (68%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVA+TGSGKTL+Y+LP + HI +Q + G+GPI LVL+PTRELA QI++ F
Sbjct: 426 RDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLVLSPTRELALQIEKEILKFS 485
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGV 759
T ++ C +GG+ Q +L+RGV
Sbjct: 486 STMDLKVCCCYGGSNIENQISELKRGV 512
Score = 35.5 bits (78), Expect = 1.6
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKT- 439
F K+FY + E++ R + V G V P + + P+ V ++
Sbjct: 346 FRKHFYQVPFEMSTMDNRELDMLRLELDNVRARGKNVPPPFLTWGQLLMPESVMSVIQND 405
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+G+ +P+PIQ Q PI +SG++++
Sbjct: 406 LGFAKPSPIQCQAIPIVLSGRDMI 429
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 87.8 bits (208), Expect = 3e-16
Identities = 42/88 (47%), Positives = 57/88 (64%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLA++LP HI QP G+G IAL+++PTRELA QI F
Sbjct: 547 RDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVECKKFS 606
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R CV+GGA EQ +L+RG +
Sbjct: 607 KVLGLRTACVYGGASISEQIAELKRGAD 634
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/82 (34%), Positives = 46/82 (56%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 445
F KNFY P + + EV ++R+ V ++G + PIQ + +A + V +K
Sbjct: 469 FQKNFYIEVPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQ 528
Query: 446 YKEPTPIQAQGWPIAMSGKNLL 511
Y++PT IQAQ P M+G++L+
Sbjct: 529 YEKPTSIQAQTIPAIMNGRDLI 550
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 87.8 bits (208), Expect = 3e-16
Identities = 41/88 (46%), Positives = 59/88 (67%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGV+QTGSGKTL ++LP ++H+ QPP+ G GPI L+L+PTREL QI + A +
Sbjct: 357 RDIIGVSQTGSGKTLTFLLPGLLHLLAQPPVGTG-GPIMLILSPTRELCLQIAEEARPYS 415
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R ++GGA K Q R+L+ G E
Sbjct: 416 RLLNLRLVPIYGGASKFAQVRELQNGAE 443
Score = 53.6 bits (123), Expect = 6e-06
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVE-VHNPIQYFEEANFPDYVQQGV 433
L K+FYD R E+E H + + G + P+ F+EA F +Q +
Sbjct: 275 LVEIKKDFYDLSYEADSRPGEEIERILKAHNIIIEGEHPLPKPVTTFDEAVFNQQIQNII 334
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
K + EPTPIQ GW ++G++++
Sbjct: 335 KESNFTEPTPIQKVGWTSCLTGRDII 360
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 87.8 bits (208), Expect = 3e-16
Identities = 41/88 (46%), Positives = 59/88 (67%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + +A+TGSGKT+AY+LPAI H+ QP +R +G I L++APTRELA QI ++
Sbjct: 426 RDVLAIAETGSGKTMAYLLPAIRHVLYQPKLRENEGMIVLIIAPTRELASQIGVESSKLC 485
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R V+GG+P EQ L+RGVE
Sbjct: 486 KLVGIRTKAVYGGSPIGEQLNALKRGVE 513
Score = 56.8 bits (131), Expect = 6e-07
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
QPF KNFY + +EVE +R N + V G PI F + PD + ++
Sbjct: 345 QPFKKNFYVQISAITAMKEHEVEAFRKANGNIRVRGKYCPRPIYNFSQCGLPDPILSLLQ 404
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLLA 514
Y++P PIQ Q P M G+++LA
Sbjct: 405 RRNYEKPFPIQMQCIPALMCGRDVLA 430
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 87.4 bits (207), Expect = 4e-16
Identities = 41/88 (46%), Positives = 59/88 (67%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + +A+TGSGKTL Y++P +H+ R GP LVL+PTRELA QIQ A FG
Sbjct: 199 RDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRM-GPTILVLSPTRELATQIQVEALKFG 257
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+S + C++GGAPK Q +++ERGV+
Sbjct: 258 KSSKISCACLYGGAPKGPQLKEIERGVD 285
Score = 63.3 bits (147), Expect = 7e-09
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +2
Query: 326 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
E Y HE+TVSG +V P+ FE P+ + + V + G+ P+PIQAQ WPIAM ++
Sbjct: 141 EAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRD 200
Query: 506 LLA 514
++A
Sbjct: 201 IVA 203
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 87.0 bits (206), Expect = 5e-16
Identities = 44/90 (48%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTRELAQQIQQVAAD 672
++ IG+AQTG+GKTLA++LPA++HI Q PI RG+ GP LVLAPTRELA QI++ A
Sbjct: 144 EDLIGIAQTGTGKTLAFLLPALIHIEGQ-PIPRGERGGPNVLVLAPTRELALQIEKEVAK 202
Query: 673 FGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+ ++ C++GG +R Q + GVE
Sbjct: 203 YQFRG-IKAVCLYGGGDRRAQINVVRNGVE 231
Score = 53.6 bits (123), Expect = 6e-06
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVEVHNPIQYFEEA--NFPDYVQQGV 433
P K FY+ V P +V +R N+ + + NP+ F +A +PD +++ +
Sbjct: 63 PLVKMFYNEREEVANMRPEQVAAFREANNNIDNERKPIPNPVSEFHQAFGEYPDLMEE-L 121
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ + PTPIQAQ WPI + G++L+
Sbjct: 122 RKQKFTTPTPIQAQAWPILLRGEDLI 147
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 86.2 bits (204), Expect = 8e-16
Identities = 37/88 (42%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFG 678
+ IGVAQTG+GKTL+Y++P +HI++QP ++R +GP LVL PTRELA Q+ +++
Sbjct: 280 DLIGVAQTGTGKTLSYLMPGFIHIDSQPVLQRARNGPGMLVLTPTRELALQVDAECSEYS 339
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ +++ C++GG + Q +DL +G +
Sbjct: 340 YRG-LKSVCIYGGGDRDGQIKDLSKGAD 366
Score = 48.8 bits (111), Expect = 2e-04
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Frame = +2
Query: 248 FCSLQPFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVE------VHNPIQYFEEAN 406
+ L P KNFY S +V+ +R N+ + ++ + NP FE+A
Sbjct: 187 WAGLPPVKKNFYIESEKTSSMSQEQVDNWRKENYNIICDDLKDGEKRPLPNPTCNFEDAF 246
Query: 407 --FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+P+ V + ++ G+++PTPIQ+Q WPI + G +L+
Sbjct: 247 HCYPE-VMRNIEKAGFQKPTPIQSQAWPIILQGIDLI 282
>UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Takifugu
rubripes|Rep: Probable ATP-dependent RNA helicase DDX43
(EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein
HAGE) (Helical antigen). - Takifugu rubripes
Length = 510
Score = 85.8 bits (203), Expect = 1e-15
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQP-PIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
+ I +AQTG+GKTLAY+LP +H+N QP P +GP LVL PTRELA Q+ +
Sbjct: 114 DLIAIAQTGTGKTLAYLLPGFIHMNGQPVPKCERNGPGMLVLTPTRELALQVDAECKKYS 173
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ Y ++ CV+GG ++ Q +ERGV+
Sbjct: 174 YKDY-KSVCVYGGGDRKAQIHKVERGVD 200
Score = 49.2 bits (112), Expect = 1e-04
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRN---NHEVTVSGVE-------VHNPIQYFEEAN 406
L P K FY ++ P EV ++R N+ + V ++ + P + F EA
Sbjct: 21 LPPIKKQFYIEAESLSALMPEEVNQWRQAKENNNIFVDDLKKEGEKRPIPKPCRTFLEA- 79
Query: 407 FPDY--VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F Y + VK G+ PTPIQ+Q WP+ +SG +L+A
Sbjct: 80 FQHYTEIMDNVKHAGFVNPTPIQSQAWPVLLSGDDLIA 117
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 85.8 bits (203), Expect = 1e-15
Identities = 37/85 (43%), Positives = 57/85 (67%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IGVA+TGSGKT+A++LP HI +Q P+ +GP+ +++ PTRELA QI + F
Sbjct: 514 RDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEPSEGPVGIIMTPTRELAVQIYREMRPFI 573
Query: 679 HTSYVRNTCVFGGAPKREQARDLER 753
+R CV+GGAP EQ ++++
Sbjct: 574 KALGLRAACVYGGAPISEQIAEMKK 598
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
+PFNK FY P + S + R + +TV G + P+ + P +K
Sbjct: 433 EPFNKAFYHPPAEIQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSHCGLPASCLDVIK 492
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
+GY PTPIQ+Q P MSG++++
Sbjct: 493 RLGYSAPTPIQSQAMPAIMSGRDII 517
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 85.8 bits (203), Expect = 1e-15
Identities = 43/105 (40%), Positives = 63/105 (60%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G R A + + + ++ IGVA+TGSGKTLA+ +P I H+ +Q P++ DGPI L+
Sbjct: 528 GYARPTAIQAQAIPIAESGRDLIGVAKTGSGKTLAFGIPMIRHVLDQRPLKPADGPIGLI 587
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 756
LAPTREL+ QI F + S + C +GG P +Q ++RG
Sbjct: 588 LAPTRELSLQIVNELKPFLNASGITIKCAYGGQPISDQIAMIKRG 632
Score = 46.4 bits (105), Expect = 8e-04
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
+PF K+FY + + S +V + R+ + + V +V P+ + +
Sbjct: 466 EPFRKDFYTEPAEITQMSAEDVADLRHELDGIKVKPDDVPRPVTKWAQMGLLQQTMDVFT 525
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
+GY PT IQAQ PIA SG++L+
Sbjct: 526 RVGYARPTAIQAQAIPIAESGRDLI 550
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 85.0 bits (201), Expect = 2e-15
Identities = 42/83 (50%), Positives = 53/83 (63%)
Frame = +1
Query: 514 VAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 693
+A+TGSGKTLAY+LP I H++ Q P++ GDGPI L+L PTRELA QI A F
Sbjct: 750 IAETGSGKTLAYLLPMIRHVSAQRPLQEGDGPIGLILVPTRELATQIYLEAKPFLKAYKY 809
Query: 694 RNTCVFGGAPKREQARDLERGVE 762
VFGG + Q +L+RG E
Sbjct: 810 EIVAVFGGTGIKGQLSELKRGCE 832
Score = 54.0 bits (124), Expect = 4e-06
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNN-HEVTVSGVEVHNPIQYFEEANFPDYVQQG- 430
L+ F KNFY + + + EV+ YR N E+ V G EV PI+ + ++ D + +
Sbjct: 651 LEHFQKNFYIESKEISQMTEDEVKIYRENLGEIQVKGQEVPRPIKSWLQSGLSDRILEVL 710
Query: 431 VKTMGYKEPTPIQAQGWPIAMSGKNLL 511
++ Y +P PIQ Q P+ MSG++++
Sbjct: 711 IEKKKYDKPFPIQCQSLPVIMSGRDMI 737
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 84.6 bits (200), Expect = 3e-15
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDGP 609
K G QR S + IGVAQTG+GKTL+Y++P +H+++QP R +GP
Sbjct: 321 KKAGFQRPTPIQSQAWPIVLQGMDLIGVAQTGTGKTLSYLIPGFIHLDSQPISREERNGP 380
Query: 610 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
LVL PTRELA Q++ + + + +++ CV+GG ++EQ + + +GV+
Sbjct: 381 GMLVLTPTRELALQVEAECSKYSYKG-LKSVCVYGGGNRKEQIQHITKGVD 430
Score = 54.4 bits (125), Expect = 3e-06
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Frame = +2
Query: 248 FCSLQPFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVE------VHNPIQYFEEA- 403
+ L P KNFY S +V+ +R N +T ++ + NP FE+A
Sbjct: 251 WADLPPIKKNFYVESTATSSLSQVQVDAWRQENFNITCEDLKDGEKRPIPNPTCKFEDAF 310
Query: 404 -NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
++P+ V + +K G++ PTPIQ+Q WPI + G +L+
Sbjct: 311 EHYPE-VLKSIKKAGFQRPTPIQSQAWPIVLQGMDLI 346
>UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 478
Score = 84.6 bits (200), Expect = 3e-15
Identities = 48/117 (41%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Frame = +1
Query: 418 CATRCKDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRR 597
C + G + A + L + + + +A+TGSGKTLA++LPA I+ Q P+ +
Sbjct: 66 CLRALRRMGYESPTAVQAQCLPVIWSGHDALVMAKTGSGKTLAFLLPAYAQISRQRPLTK 125
Query: 598 GDGPIALVLAPTRELAQQIQQVAADFGH--TSYVRNTCVFGGAPKREQARDLERGVE 762
+GPIALVLAPTRELA QI A F S R +FGG KR+Q + L G E
Sbjct: 126 REGPIALVLAPTRELASQIANEAHKFTKFGVSGARCCAIFGGVSKRDQFKKLRAGAE 182
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 84.6 bits (200), Expect = 3e-15
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ +G+A+TGSGKT ++++PA++HI+ Q I DGPI LVL+PTRELA Q +VAA F
Sbjct: 124 DMVGIAKTGSGKTASFLIPALMHISAQRKISENDGPIVLVLSPTRELALQTDEVAAQFCV 183
Query: 682 TSYVRNTCVFGGAPKREQARDL 747
++ C++GG + Q L
Sbjct: 184 KMGYKHVCIYGGEDRHRQINKL 205
Score = 40.7 bits (91), Expect = 0.042
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +2
Query: 320 EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 499
E ++Y +++ + G + FEE N P + + +K + PTPIQ+ PI + G
Sbjct: 63 EQKKYLEKNQIKLLGENIPPVAVTFEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKG 122
Query: 500 KNLL 511
+++
Sbjct: 123 NDMV 126
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 83.4 bits (197), Expect = 6e-15
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVA 666
++ IGVA+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEET 398
Query: 667 ADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
FG ++ V GGA + +Q L GVE
Sbjct: 399 NKFGKLLGIKTVSVIGGASREDQGMKLRMGVE 430
Score = 60.9 bits (141), Expect = 4e-08
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 83.4 bits (197), Expect = 6e-15
Identities = 39/115 (33%), Positives = 65/115 (56%)
Frame = +1
Query: 418 CATRCKDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRR 597
C K G + + + + ++ IG+A+TGSGKT+A++LP + H+ +Q P+
Sbjct: 414 CLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSG 473
Query: 598 GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+GPIA+V++PTRELA QI + F +R +C GG+ E +++G E
Sbjct: 474 SEGPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSISEDIAAMKKGAE 528
Score = 48.0 bits (109), Expect = 3e-04
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
+PF K FY P VL+ E E R + + + G + P++ + P +K
Sbjct: 360 EPFRKAFYVPPVEVLEMDEEEAELVRLEMDGIKIRGQDAPKPVRNWGAFGLPQGCLDVIK 419
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
G++ PT IQAQ P MSG++++
Sbjct: 420 HQGWETPTSIQAQAIPAIMSGRDVI 444
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 83.0 bits (196), Expect = 8e-15
Identities = 36/88 (40%), Positives = 57/88 (64%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +G+A+TGSGKT+++++PAI+HI + P + +GP L+LAPTREL QI A F
Sbjct: 191 KDVVGIAETGSGKTISFLIPAIIHILDTPLAQYREGPRVLILAPTRELVCQIADEAIKFT 250
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ ++ FGG P+ Q +D + G +
Sbjct: 251 KGTAIKTVRCFGGVPQSSQMKDFQSGCD 278
Score = 79.8 bits (188), Expect = 7e-14
Identities = 36/86 (41%), Positives = 48/86 (55%)
Frame = +2
Query: 254 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 433
+L PF KNFY P R EV Y +E+ V+G E + FEE NFP + +
Sbjct: 109 TLPPFEKNFYVESPITANRDAEEVSRYLQENEIQVNGCESIKALLTFEECNFPQSILDVI 168
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLL 511
K Y +PTPIQA GWPI + GK+++
Sbjct: 169 KEQNYIKPTPIQAIGWPIVLQGKDVV 194
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/82 (48%), Positives = 51/82 (62%)
Frame = +1
Query: 517 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 696
A+TGSGKTLAY +P I H+ Q P+ +G+GPI +V AP RELA+QI FG +R
Sbjct: 184 AKTGSGKTLAYTIPLIKHVMAQRPLSKGEGPIGIVFAPIRELAEQINTEINKFGKYLNIR 243
Query: 697 NTCVFGGAPKREQARDLERGVE 762
+ VFGG Q L+RG E
Sbjct: 244 SVAVFGGTGISNQIGALKRGTE 265
Score = 43.6 bits (98), Expect = 0.006
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNH--EVTVSGVEVHNPIQYFEEANFPDYVQQGV 433
+P +K Y P + K EV+E R V G PI+ + E +
Sbjct: 96 EPIHKALYVEVPDIKKLKKEEVKEIRRIELEGCIVKGKNCPKPIRTWSECGINPITMDVI 155
Query: 434 KTMGYKEPTPIQAQGWPIAMSG 499
K + Y++P+P+Q Q P+ MSG
Sbjct: 156 KALKYEKPSPVQRQAIPVIMSG 177
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 81.8 bits (193), Expect = 2e-14
Identities = 36/88 (40%), Positives = 58/88 (65%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ I +A+TGSGKTL+Y+ P I H+ +Q P+R DGPI+++L PTREL+ Q++ A +
Sbjct: 761 RDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNEAKIYC 820
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ V+GG+ Q + L++GVE
Sbjct: 821 KAVNIEILAVYGGSNIARQLKVLKKGVE 848
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
P KN Y + +V+ +R NN + V G P+QYF + P + Q ++
Sbjct: 681 PIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEK 740
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA 514
+K+ IQ Q P M G++++A
Sbjct: 741 KNFKKMYNIQMQTIPALMCGRDVIA 765
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 81.8 bits (193), Expect = 2e-14
Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQQVAA 669
++ IG+AQTG+GKTLA++LPA +HI Q P+ RG+ GP LV+APTRELA QI++
Sbjct: 361 EDLIGIAQTGTGKTLAFLLPAFIHIEGQ-PVPRGEARGGPNVLVMAPTRELALQIEKEVF 419
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+ ++ C++GG +R Q ++ GVE
Sbjct: 420 KYQFRD-IKAICLYGGGDRRTQINKVKGGVE 449
Score = 62.1 bits (144), Expect = 2e-08
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 12/92 (13%)
Frame = +2
Query: 272 KNFYDPHPTVLKRSPYEVEEYR-NNHEVTVS---------GVEVHNPIQYFEEA--NFPD 415
KNFY+ P V +P EV E+R N+ + V + NP+Q FE+A +P+
Sbjct: 274 KNFYNELPEVANMTPEEVSEFRCANNNIVVDRTFKDADKPSAPIPNPVQTFEQAFHEYPE 333
Query: 416 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+++ +K G+ +P+PIQAQ WP+ + G++L+
Sbjct: 334 LLEE-IKKQGFAKPSPIQAQAWPVLLKGEDLI 364
>UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 573
Score = 81.0 bits (191), Expect = 3e-14
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ +G+++TGSGKTL++ILPAI HI QP GP LV+APTRELA QI Q A +
Sbjct: 178 DMLGISKTGSGKTLSFILPAIEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQYLR 237
Query: 682 TSYVRNTCVFGGAPKREQARDLER 753
+ ++GGAP+R Q L R
Sbjct: 238 LVNIEIATIYGGAPRRSQQLQLSR 261
Score = 38.7 bits (86), Expect = 0.17
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
PI E F ++ + +++PTP+Q+ GWPIA+SG ++L
Sbjct: 138 PIDTIESVPFQSTIKNFLSKK-FEKPTPVQSLGWPIALSGSDML 180
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 81.0 bits (191), Expect = 3e-14
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A+TGSGKT A++LP + +I+ PP+ +GP A+V+APTRELAQQI++
Sbjct: 351 RDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETV 410
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
F H R T + GG EQ + +G E
Sbjct: 411 KFAHYLGFRVTSIVGGQSIEEQGLKITQGCE 441
Score = 39.5 bits (88), Expect = 0.096
Identities = 14/60 (23%), Positives = 34/60 (56%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R + ++ G + P++ +EE+ + + V+ GYK+P+PIQ P+ + ++++
Sbjct: 295 FREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVI 354
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 80.6 bits (190), Expect = 4e-14
Identities = 36/88 (40%), Positives = 57/88 (64%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +GVA+TGSGKT++Y+ P ++HI +Q + + +GPI L+LAPTREL QQ+ + +
Sbjct: 100 RDIVGVAKTGSGKTVSYLWPLLIHILDQRELEKNEGPIGLILAPTRELCQQVYTESKRYA 159
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ + GG K EQ + L+ GVE
Sbjct: 160 KIYNISVGALLGGENKHEQWKMLKAGVE 187
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/84 (34%), Positives = 48/84 (57%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+ F KNFY HP + K + +VE+ R E+ VSGV PI F F + + + +
Sbjct: 20 EAFTKNFYQEHPDITKLTEQQVEKIRKEFEIKVSGVRPPKPIVSFGHLGFDEELMRQITK 79
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+G+++PT IQ Q P +SG++++
Sbjct: 80 LGFEKPTQIQCQALPCGLSGRDIV 103
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 80.2 bits (189), Expect = 6e-14
Identities = 37/90 (41%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF 675
++ IG+++TGSGKT++Y+LP + + Q P+ + + GP+ L+LAPTRELA QI + F
Sbjct: 294 RDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKF 353
Query: 676 GHT-SYVRNTCVFGGAPKREQARDLERGVE 762
+ +R+ C GG+ ++Q DL+RG E
Sbjct: 354 TEADTSIRSVCCTGGSEMKKQITDLKRGTE 383
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGVEVHNPIQYFEEANF-PDYVQQG 430
L+PF KNFY TV S EVEE R + + + G P+ + + D +
Sbjct: 211 LEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLI 270
Query: 431 VKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ + + TPIQ+Q P MSG++++
Sbjct: 271 TEKLHFGSLTPIQSQALPAIMSGRDVI 297
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 80.2 bits (189), Expect = 6e-14
Identities = 41/92 (44%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRR----GDGPIALVLAPTRELAQQIQQVA 666
++ IGVA+TGSGKT A+++P +V I P I R GP A++LAPTRELAQQI++
Sbjct: 429 RDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEET 488
Query: 667 ADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
FG +R V GG + +Q L G E
Sbjct: 489 IKFGKPLGIRTVAVIGGISREDQGFRLRMGCE 520
Score = 54.8 bits (126), Expect = 2e-06
Identities = 19/60 (31%), Positives = 40/60 (66%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R ++ +T G ++ NPI+ +++++ P ++ + + GYKEPTPIQ Q PI + ++++
Sbjct: 373 FREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDII 432
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 79.8 bits (188), Expect = 7e-14
Identities = 38/105 (36%), Positives = 59/105 (56%)
Frame = +1
Query: 448 QRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLA 627
++ A S L + IGVA+TGSGKT+AY+ P +VH++ Q + + +GPI LV+
Sbjct: 209 EKPTAIQSQALPCVLSGRNVIGVAKTGSGKTIAYVWPMLVHVSAQRAVEKKEGPIGLVVV 268
Query: 628 PTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
PTREL QQ+ + + + + GG K Q ++L GV+
Sbjct: 269 PTRELGQQVYLETKKYAQLFQISVSALLGGENKHHQWKELRAGVD 313
Score = 51.2 bits (117), Expect = 3e-05
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+ F NFY H + + +VE+ + +++ V G V PI F + +
Sbjct: 146 EEFESNFYQEHEEIANLNVAQVEKIKREYQIHVKGNNVPKPIISFGHLQLDQKLVNKIVA 205
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+++PT IQ+Q P +SG+N++
Sbjct: 206 QNFEKPTAIQSQALPCVLSGRNVI 229
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 79.4 bits (187), Expect = 1e-13
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRR---GDGPI 612
G ++ + S ++ +G+A+TGSGKT A+++P +++I+ QP + + DGP
Sbjct: 432 GYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPY 491
Query: 613 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
ALV+APTREL QQI++ +F R + GG +QA + +G E
Sbjct: 492 ALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQAYQVSKGCE 541
Score = 52.4 bits (120), Expect = 1e-05
Identities = 18/60 (30%), Positives = 41/60 (68%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
++ + ++ G NPI+ ++E+N P + + ++ +GY++P+PIQ Q PI+++G+++L
Sbjct: 395 FKEDFNISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDIL 454
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 79.4 bits (187), Expect = 1e-13
Identities = 40/88 (45%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDGPIALVLAPTRELAQQIQQVAADFG 678
+ +G+A TGSGKTLA++LPA++ I + P G P+ LV+APTRELAQQI++V
Sbjct: 149 DLVGLAATGSGKTLAFLLPALLKIISLPKRPSYGATPLVLVMAPTRELAQQIEEVCKTSI 208
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ +R C +GG K +Q+R L GV+
Sbjct: 209 RGTSIRQLCAYGGLGKIDQSRILRNGVD 236
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = +2
Query: 329 EYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 508
E+R H V + G NP Q F + FP Q + G+ PT IQ Q WPI + G +L
Sbjct: 93 EWRKKHNVLIEGKSQPNPFQKFTDYEFPRMFQHIFQ--GFTAPTVIQGQSWPIILGGNDL 150
Query: 509 L 511
+
Sbjct: 151 V 151
>UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 872
Score = 79.4 bits (187), Expect = 1e-13
Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF 675
++ IG+++TGSGKT++YILP + I Q + + + GP+ L+LAPTRELA QI + F
Sbjct: 315 RDLIGISKTGSGKTISYILPMLRQIKAQRTLSKNETGPLGLILAPTRELALQINEEVEKF 374
Query: 676 -GHTSYVRNTCVFGGAPKREQARDLERGVE 762
+R C GG+ ++Q DL+RGVE
Sbjct: 375 TKQDRSIRTICCTGGSEMKKQINDLKRGVE 404
Score = 45.6 bits (103), Expect = 0.001
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNN-HEVTVSGVEVHNPIQYFEEANFP-DYVQQG 430
L+PF K+FY V + EVEE R + + V G I + + P D +
Sbjct: 232 LEPFPKSFYSEPDEVKLMTDDEVEEMRLSLGGIKVKGKHCPKLITRWSQLGLPTDIMNLI 291
Query: 431 VKTMGYKEPTPIQAQGWPIAMSGKNLL 511
K + Y EPT IQ+Q P MSG++L+
Sbjct: 292 TKELKYDEPTAIQSQAIPAIMSGRDLI 318
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 79.4 bits (187), Expect = 1e-13
Identities = 37/88 (42%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFG 678
+ IGVAQTG+GKTL Y++P +H+ QP ++ + + P LVL PTRELA Q++ +
Sbjct: 281 DLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYS 340
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ +R+ CV+GG + EQ +L++GV+
Sbjct: 341 YKG-LRSVCVYGGGNRDEQIEELKKGVD 367
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Frame = +2
Query: 248 FCSLQPFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVE------VHNPIQYFEEAN 406
+ L P KNFY S E + +R N +T ++ + NP F++A
Sbjct: 188 WADLPPIKKNFYKESTATSAMSKVEADSWRKENFNITWDDLKDGEKRPIPNPTCTFDDAF 247
Query: 407 --FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+P+ V + +K G+++PTPIQ+Q WPI + G +L+
Sbjct: 248 QCYPE-VMENIKKAGFQKPTPIQSQAWPIVLQGIDLI 283
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 78.6 bits (185), Expect = 2e-13
Identities = 39/88 (44%), Positives = 54/88 (61%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +G+AQTG+GKT A+ LP I + P +G A++L+PTRELA QI + FG
Sbjct: 141 KDLVGLAQTGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELALQIHEAFVSFG 200
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ T GGAP R+Q RDL +GV+
Sbjct: 201 KRLPLNFTHAIGGAPIRKQMRDLSKGVD 228
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 78.6 bits (185), Expect = 2e-13
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 6/116 (5%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQ-PPIRRGD-- 603
+ NG ++ S ++ IGV+QTGSGKTLA++LPA++HI+ Q + D
Sbjct: 100 RKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEE 159
Query: 604 ---GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
P LVL+PTRELAQQI+ + + Y ++ C++GG + EQ GVE
Sbjct: 160 QKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-KSVCLYGGGSRPEQVEACRGGVE 214
Score = 40.3 bits (90), Expect = 0.055
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +2
Query: 248 FCSLQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEAN 406
F ++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 407 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ G ++ G+++P+PIQ+Q WP+ +SG++ +
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCI 125
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 77.8 bits (183), Expect = 3e-13
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A+TGSGKT A++LP + ++ PP+ DGP ALV+AP+RELA QI +
Sbjct: 736 RDLIGIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETN 795
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
F R V GG QA +L RGVE
Sbjct: 796 KFASYCSCRTVAVVGGRNAEAQAFELRRGVE 826
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/60 (35%), Positives = 39/60 (65%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R ++E+ + G V PI+ +EE+N + + + +K Y++PTPIQ Q PIA+ ++L+
Sbjct: 680 FREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLI 739
>UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Candida glabrata|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 816
Score = 77.4 bits (182), Expect = 4e-13
Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF 675
++ IG+++TGSGKT++Y+LP I H+ Q +R G+ GPIA++ APTRELA QI +
Sbjct: 290 RDVIGISKTGSGKTISYLLPMIRHVKAQKKLRNGETGPIAVIFAPTRELAVQINEEVQKL 349
Query: 676 GHTSYVRNTCVFGGAPKREQARDLERGVE 762
+ + C GG+ ++Q L+ GVE
Sbjct: 350 ISDLDISSICCTGGSDLKKQIDKLKTGVE 378
Score = 36.7 bits (81), Expect = 0.68
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGV 433
L P +K Y+ + + E+ + R + + + + G + P+ + + P + + +
Sbjct: 207 LDPISKCLYNEPEEIKSYTEDEIADLRLDLDNIKIEGKDCPRPVTKWSQLGIPYDIIRFI 266
Query: 434 KTM-GYKEPTPIQAQGWPIAMSGKNLL 511
K + YK TPIQ Q P MSG++++
Sbjct: 267 KDVFSYKSLTPIQTQTIPAIMSGRDVI 293
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 77.0 bits (181), Expect = 5e-13
Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQ--PPIRRGDGPIALVLAPTRELAQQIQQVAADF 675
+ IG+AQTG+GKTLA++LP ++H Q P RG G LVLAPTRELA QI+ +
Sbjct: 322 DMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRG-GANVLVLAPTRELALQIEMEVKKY 380
Query: 676 GHTSYVRNTCVFGGAPKREQARDLERGVE 762
++ CV+GG + Q DLERG E
Sbjct: 381 SFRG-MKAVCVYGGGNRNMQISDLERGAE 408
Score = 59.7 bits (138), Expect = 8e-08
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 13/96 (13%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGV----------EVHNPIQYFEE--A 403
P KNFY P V + E+E R N+++TVS V + NP+ FE+ A
Sbjct: 230 PLTKNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFA 289
Query: 404 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+PD +++ K MG+ +P+PIQ+Q WPI + G +++
Sbjct: 290 EYPDMLEEITK-MGFSKPSPIQSQAWPILLQGHDMI 324
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 77.0 bits (181), Expect = 5e-13
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGD---GPIALVLAPTRELAQQIQQVAA 669
K+ IG+A+TGSGKT A+I+P I+ I+ PP+ + GP A+VLAPTRELAQQIQ
Sbjct: 287 KDLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGN 346
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERG 756
F R V GG EQ+ + +G
Sbjct: 347 KFAEPLGFRCVSVVGGHAFEEQSFQMSQG 375
Score = 45.2 bits (102), Expect = 0.002
Identities = 17/59 (28%), Positives = 37/59 (62%)
Frame = +2
Query: 335 RNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ ++ +++ G ++ NP++ +EEA P + + +K + YKEP+ IQ P+ + K+L+
Sbjct: 232 KEDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLI 290
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 76.2 bits (179), Expect = 9e-13
Identities = 34/88 (38%), Positives = 57/88 (64%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ I +A+TGSGKT++Y+ P I H+ +Q +R DGPI ++L PTREL+ Q++ A+ +
Sbjct: 607 RDIIAIAETGSGKTISYLFPLIRHVLHQDKLRNNDGPIGIILTPTRELSIQVKNEASIYC 666
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
++ V+GG+ Q L++GVE
Sbjct: 667 KAVDLKILAVYGGSNIGAQLNVLKKGVE 694
Score = 47.2 bits (107), Expect = 5e-04
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
P KN Y + + +VE +R NN + V G PIQYF + P + ++
Sbjct: 527 PIKKNVYVQVSEITNMTEKDVEMFRKNNGNIVVRGKNCPRPIQYFYQCGLPGKILNILEK 586
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA 514
+K+ IQ Q P M G++++A
Sbjct: 587 KNFKKMFSIQMQAIPALMCGRDIIA 611
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 76.2 bits (179), Expect = 9e-13
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 6/92 (6%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAI----VHINNQPPIRRGD--GPIALVLAPTRELAQQIQQ 660
++ + AQTGSGKT +Y++PAI ++I+N+PP G P AL+LAPTREL+ QI
Sbjct: 195 RDLMACAQTGSGKTASYLIPAINEILLNISNRPPYSPGSHSSPQALILAPTRELSLQIYG 254
Query: 661 VAADFGHTSYVRNTCVFGGAPKREQARDLERG 756
A F + + VR V+GGA R Q +L RG
Sbjct: 255 EARKFTYHTPVRCVVVYGGADPRHQVHELSRG 286
Score = 41.1 bits (92), Expect = 0.032
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
P+ F E N + + VK GY +PTP+Q+ G P A++ ++L+A
Sbjct: 155 PVLSFSEMNMVPVLLENVKRCGYTKPTPVQSLGIPTALNHRDLMA 199
>UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 816
Score = 76.2 bits (179), Expect = 9e-13
Identities = 41/92 (44%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTRELAQQIQQVAAD 672
++ IG+++TGSGKT+++ILP + I Q P+ GD GP+ L+L+PTRELA QI +
Sbjct: 275 RDVIGISKTGSGKTVSFILPLLRQIKAQRPL-GGDETGPLGLILSPTRELALQIHEEVTK 333
Query: 673 F--GHTSYVRNTCVFGGAPKREQARDLERGVE 762
F G S +R+ C GG+ + Q D++RGVE
Sbjct: 334 FTSGDPS-IRSLCCTGGSELKRQINDIKRGVE 364
Score = 44.8 bits (101), Expect = 0.003
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGV 433
L+PF KNFY + K S EV + R + + V V G + PI + + + +
Sbjct: 192 LKPFIKNFYQEPEEISKLSEEEVADLRLSLDNVQVRGRDCPRPILKWSQLGLNSGIMNLL 251
Query: 434 -KTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ + + PTPIQAQ P MSG++++
Sbjct: 252 TRELEFTVPTPIQAQAIPAIMSGRDVI 278
>UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=16; Pezizomycotina|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Coccidioides immitis
Length = 817
Score = 75.8 bits (178), Expect = 1e-12
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPI-----RRGDGPIALVLAPTRELAQQIQQV 663
++ IGVA TGSGKT A++LP +V+I P + R+ DGP A++LAPTRELAQQI+
Sbjct: 415 RDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIENE 474
Query: 664 AADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
A F + + GG EQ+ L G E
Sbjct: 475 ARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAE 507
Score = 44.0 bits (99), Expect = 0.004
Identities = 16/60 (26%), Positives = 36/60 (60%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
++ + ++ G + NP++ + E+ P + + + +GYK+P+PIQ PIA+ ++L+
Sbjct: 359 FKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDLI 418
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 75.8 bits (178), Expect = 1e-12
Identities = 40/93 (43%), Positives = 60/93 (64%), Gaps = 8/93 (8%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIA-----LVLAPTRELAQQI 654
K+ +G+A+TGSGKTLA+ +P I ++ PP+ ++G G + LVLAPTRELAQQ
Sbjct: 211 KDVVGIAETGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQVPGQIQMLVLAPTRELAQQS 270
Query: 655 QQVAADFGHTSYVRNTCVFGGAPKREQARDLER 753
+ + FG +++ C+FGG K QAR+L +
Sbjct: 271 HEHLSAFGEQVGLKSVCIFGGVGKDGQARELSQ 303
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase
PRP28, putative; n=2; Eukaryota|Rep: Pre-mRNA splicing
factor RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 75.4 bits (177), Expect = 2e-12
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A+TGSGKT A++LP + ++ PP+ DGP AL++AP+RELA QI
Sbjct: 619 RDLIGIAETGSGKTAAFVLPMLAYVKQLPPLTYETSQDGPYALIIAPSRELAIQIFDETN 678
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
F R V GG QA +L +GVE
Sbjct: 679 KFASYCSCRTVAVVGGRNAEAQAFELRKGVE 709
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/60 (35%), Positives = 38/60 (63%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R ++E+ + G V PI+ +EE+N + + +K Y++PTPIQ Q PIA+ ++L+
Sbjct: 563 FREDNEIYIKGGIVPPPIRRWEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLI 622
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINN---QPPIRRGDGPIALVLAPTRELAQQIQQVAA 669
++FIG+A TGSGKT+A+ +PA++H+ + ++G P LVL+PTRELAQQI V
Sbjct: 130 RDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGV-PRVLVLSPTRELAQQIADVLC 188
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+ G + + C++GG K Q L+ GV+
Sbjct: 189 EAGAPCGISSVCLYGGTSKGPQISALKSGVD 219
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 74.1 bits (174), Expect = 4e-12
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQIQQVAA 669
++ IG+A TGSGKT A++LP + ++ PP+ DGP AL+LAP+RELA QI
Sbjct: 377 RDLIGIAVTGSGKTAAFVLPMLTYVKKLPPLDDETSLDGPYALILAPSRELALQIYDETV 436
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
F R+ V GG QA +L +G E
Sbjct: 437 KFSAFCSCRSVAVVGGRNAESQAFELRKGCE 467
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/60 (35%), Positives = 36/60 (60%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R + E+ + G V PI+ + E+ P + + +K GY +PTPIQ Q PIA+ ++L+
Sbjct: 321 FREDFEIYIKGGRVPPPIRTWAESPLPWELLEAIKKAGYIKPTPIQMQAIPIALEMRDLI 380
>UniRef50_A1SQH8 Cluster: DEAD/DEAH box helicase domain protein
precursor; n=2; Actinomycetales|Rep: DEAD/DEAH box
helicase domain protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 507
Score = 73.7 bits (173), Expect = 5e-12
Identities = 37/109 (33%), Positives = 57/109 (52%)
Frame = +1
Query: 436 DNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 615
D G+ + ++ L DS ++ +G +TGSGKT A++LP + + + P A
Sbjct: 25 DRGIVQPTPIQAATLPDSLAGRDVLGRGRTGSGKTYAFLLPLVARLTASGRPAQARKPRA 84
Query: 616 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
LVLAPTREL QI++ T+ + VFGG + Q + L RG +
Sbjct: 85 LVLAPTRELVNQIEEALKPLARTAGLTTQTVFGGVGQNPQVQGLRRGAD 133
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 73.7 bits (173), Expect = 5e-12
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGD---GPIALVLAPTRELAQQIQQVA 666
++ IG+A+TGSGKTLA+ +PAI+H+ I G P LVL+PTRELA QI V
Sbjct: 152 RDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVL 211
Query: 667 ADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+ G +++ CV+GG+ K Q + GV+
Sbjct: 212 REAGEPCGLKSICVYGGSSKGPQISAIRSGVD 243
Score = 39.5 bits (88), Expect = 0.096
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 320 EVEEYRNNHEVTVSGVEV--HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 493
E E + VT GVE + ++ F E+N P+ V KT +++P+PIQ+ WP +
Sbjct: 92 EGESEQQKVVVTGKGVEEAKYAALKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLL 149
Query: 494 SGKNLL 511
G++L+
Sbjct: 150 DGRDLI 155
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 73.3 bits (172), Expect = 6e-12
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 8/96 (8%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG--------PIALVLAPTRELAQQI 654
++ + AQTGSGKT A++ P I I PP+ R P+AL+LAPTREL QQI
Sbjct: 169 RDLMSCAQTGSGKTAAFLFPIISDILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQI 228
Query: 655 QQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+ A F + +R+ CV+GG+ Q +++ +G +
Sbjct: 229 YEEAVRFTEDTPIRSVCVYGGSDSYTQIQEMGKGCD 264
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 73.3 bits (172), Expect = 6e-12
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Frame = +1
Query: 430 CKDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDG 606
CK+ + S + + + IG+AQTGSGKT A+ +P + + ++Q P
Sbjct: 96 CKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPY----- 150
Query: 607 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 753
A +LAPTRELAQQI++ G VR+TC+ GG +QARDL R
Sbjct: 151 -YACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMR 198
Score = 34.3 bits (75), Expect = 3.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F E N + Q K + Y +PTPIQ++ P A+ G +++
Sbjct: 83 FSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDII 122
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 72.9 bits (171), Expect = 8e-12
Identities = 37/88 (42%), Positives = 51/88 (57%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ G+AQTG+GKT A+ LP+I ++ P R G L+L+PTRELA QI + D+
Sbjct: 44 KDLCGIAQTGTGKTAAFALPSIHYLATNPQARPQRGCRMLILSPTRELASQIARACNDYT 103
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ VFGG P Q R L+RG +
Sbjct: 104 RHLRMSVNAVFGGVPIGRQMRMLDRGTD 131
Score = 34.3 bits (75), Expect = 3.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 508
F+ + Q + +GY +PTPIQAQ P + GK+L
Sbjct: 8 FKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDL 46
>UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 813
Score = 72.9 bits (171), Expect = 8e-12
Identities = 40/83 (48%), Positives = 51/83 (61%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ I +A+TGSGKTLAY LP I+H QP + GP LVLAPTRELAQQIQ
Sbjct: 470 RDVIAIAETGSGKTLAYALPGIIHSQAQPKVL---GPRILVLAPTRELAQQIQS-----Q 521
Query: 679 HTSYVRNTCVFGGAPKREQARDL 747
+ + R CV+GG K Q ++
Sbjct: 522 YELFTRTCCVYGGVFKNLQYSEI 544
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 72.9 bits (171), Expect = 8e-12
Identities = 40/85 (47%), Positives = 50/85 (58%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG+AQTGSGKTLA++LPAIVHI Q R P L+LAPTREL QI F
Sbjct: 173 DLIGIAQTGSGKTLAFLLPAIVHILAQ---ARSHDPKCLILAPTRELTLQIYDQFQKFSV 229
Query: 682 TSYVRNTCVFGGAPKREQARDLERG 756
S + C++GG + Q L +G
Sbjct: 230 GSQLYAACLYGGQDRYIQKSQLRKG 254
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Frame = +2
Query: 323 VEEYRNNHEVTVSG--VEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQGWPIAM 493
++EYR H + + V V +PI FE+ FP + + G+K PT IQAQGW IA+
Sbjct: 110 IKEYRAQHNIFIRSQHVTVPDPIMRFEDVQCFPQMLMDLLLKAGFKGPTAIQAQGWSIAL 169
Query: 494 SGKNLL 511
+G +L+
Sbjct: 170 TGHDLI 175
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 72.5 bits (170), Expect = 1e-11
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-----PIALVLAPTRELAQQIQQV 663
++ + AQTGSGKT A+ P I I I R G P+A++L+PTRELA QI
Sbjct: 184 RDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDE 243
Query: 664 AADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
A F + + V+ +GG P +Q R+LERGV+
Sbjct: 244 ARKFSYQTGVKVVVAYGGTPVNQQIRELERGVD 276
Score = 37.9 bits (84), Expect = 0.29
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 263 PF-NKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
PF N DP + + E Y + + SG V P+ F E + + + ++
Sbjct: 105 PFGNDGNADPAVNEQENTVINFEAYEDI-PIETSGDNVPPPVNTFAEIDLGEALNLNIQR 163
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA 514
Y +PTP+Q PI +G++L+A
Sbjct: 164 CKYVKPTPVQRNAIPILAAGRDLMA 188
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 72.5 bits (170), Expect = 1e-11
Identities = 45/99 (45%), Positives = 57/99 (57%), Gaps = 13/99 (13%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPP-------------IRRGDGPIALVLAPTRE 639
++ + AQTGSGKT A++LP + I + P RR PI+LVLAPTRE
Sbjct: 218 RDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRE 277
Query: 640 LAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 756
LA QI + A F + S VR V+GGA +Q RDLERG
Sbjct: 278 LAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERG 316
>UniRef50_Q752X1 Cluster: AFR452Cp; n=1; Eremothecium gossypii|Rep:
AFR452Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 287
Score = 71.7 bits (168), Expect = 2e-11
Identities = 43/95 (45%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAA 669
++++GVA TGSGKTLA++LP + P+ R DGP ALVLAPTRELAQQI+ A
Sbjct: 195 RDYVGVAATGSGKTLAFLLPIFAKLGRMAPLNAVTRQDGPRALVLAPTRELAQQIEAQAR 254
Query: 670 DFGHTSYVRNTC----VFGGAPKREQARDLERGVE 762
F S+ + C + GG E A L+ G E
Sbjct: 255 QF--LSHWQRPCPVASIAGGHSFEEIALSLQGGCE 287
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAA 669
++ I +A+TG+GKT AY++P I + P + GP ALVLAPTRELA QIQ+
Sbjct: 214 RDLIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVLAPTRELALQIQKETL 273
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+R C GG P + Q +L G E
Sbjct: 274 KLATPFGLRVCCCIGGEPMQPQIEELSNGAE 304
Score = 37.9 bits (84), Expect = 0.29
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +2
Query: 335 RNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
R N + V+ EV P++ +++ N D + +K + Y+ PTPIQ PIA+ ++L+A
Sbjct: 160 RENLNIFVNNNEVIKPLRKWDDMNVCDDLLLLIKNI-YENPTPIQCASIPIALKMRDLIA 218
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/107 (36%), Positives = 54/107 (50%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G+ A S L D ++ +G A+TGSGKTL + LP + + Q R P LV
Sbjct: 165 GMTAPFAIQSRTLPDGIAGRDILGRARTGSGKTLGFGLPMLARLAQQKRPRITGAPRGLV 224
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
L PTRELA Q+ G + +R + V GG P Q L+RG++
Sbjct: 225 LVPTRELAMQVADALRPLGDSLDLRLSVVVGGVPYGRQIAALQRGID 271
>UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=7; Trypanosomatidae|Rep: ATP-dependent
DEAD/H RNA helicase, putative - Leishmania major
Length = 685
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/88 (38%), Positives = 50/88 (56%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + A+TGSGKTL Y LP I H +QP +G+GPI LVL PT+ELA Q+ + + G
Sbjct: 85 RDLLLTAKTGSGKTLCYALPLIRHCADQPRCEKGEGPIGLVLVPTQELAMQVFTLLDELG 144
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ +R +G + R + G E
Sbjct: 145 EAARLRCVASYGSTSLSDNIRHAKVGCE 172
Score = 42.3 bits (95), Expect = 0.014
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEY-RNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
P +FY P + + E+ E R V G +V PI+ + PD V + ++
Sbjct: 5 PIRTDFYVVPPDMTNLTAQEMRELLRELDGAKVRGQDVPRPIRSWHGTGLPDRVLEVLEE 64
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
YK P +Q+ G P MSG++LL
Sbjct: 65 HEYKCPFAVQSLGVPALMSGRDLL 88
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/92 (42%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG------PIALVLAPTRELAQQIQQ 660
K+ +G AQTGSGKT A++LP + I I G G P A+++ PTREL QI
Sbjct: 308 KDLMGCAQTGSGKTAAFLLPVLTGIIKNDLIEGGSGFGGPQYPAAIIVGPTRELVNQIYL 367
Query: 661 VAADFGHTSYVRNTCVFGGAPKREQARDLERG 756
A F ++ VR V+GG QAR+LE+G
Sbjct: 368 EARKFASSTCVRPVVVYGGTSVGYQARELEKG 399
Score = 41.5 bits (93), Expect = 0.024
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 350 VTVSGVEV-HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
V VSG N I F++A+ + V+ V+ Y PTPIQ PI +SGK+L+
Sbjct: 257 VEVSGTNAPKNGILNFDQADLSETVRSNVRKAKYDRPTPIQKWAIPIVLSGKDLM 311
>UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. RNA
SFII helicase; n=3; Cryptosporidium|Rep: Nucleolar
protein GU2. eIF4A-1-family. RNA SFII helicase -
Cryptosporidium parvum Iowa II
Length = 738
Score = 70.5 bits (165), Expect = 5e-11
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQ---PPIRRGD 603
+ G++R + Y K+ +G A+TG+GKTLA++LP I + + P + G
Sbjct: 80 RSRGIERLFPIQAQSFESIYGKKDVLGKAKTGTGKTLAFVLPVIERLLKKGKFDPNKHGR 139
Query: 604 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
P+ LVL PTRELAQQ+ + V+GG+P+ Q +++++GV+
Sbjct: 140 RPLVLVLLPTRELAQQVSNEFELMKGKDRYKVCSVYGGSPEYPQIQEIKKGVD 192
>UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein;
n=2; Oligohymenophorea|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 749
Score = 70.5 bits (165), Expect = 5e-11
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAA 669
K+ IG++QTG+GKT A+++P I ++ + PP+ DGP AL+L PTRELA QI++
Sbjct: 361 KDLIGISQTGTGKTCAFLIPLITYLRSLPPMDEEIAKDGPYALILIPTRELAPQIEKEFQ 420
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+ +++ + GG + QA L+ G E
Sbjct: 421 NLTSNMRMKSLVMVGGKDEGNQAFKLKLGCE 451
Score = 50.4 bits (115), Expect = 5e-05
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R ++++ + G V P++ +EE P Y+ V+ Y++PTPIQ Q PI + K+L+
Sbjct: 305 FREDNDIIIKGGRVPKPMRTWEEGELPPYILDAVRRSKYEKPTPIQMQTIPIGLQRKDLI 364
>UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 738
Score = 70.5 bits (165), Expect = 5e-11
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAA 669
++ IGVA+TGSGKT A+++P + +I + PP+ R GP AL++APTRELAQQI+
Sbjct: 353 RDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELAQQIETETR 412
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
F + + GG EQ L G E
Sbjct: 413 RFALPLGYKCVSIVGGRSVEEQQFALRDGAE 443
Score = 46.8 bits (106), Expect = 6e-04
Identities = 18/60 (30%), Positives = 35/60 (58%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R + + G + +P++ + E+ P + ++ +GYKEP+PIQ Q PI M ++L+
Sbjct: 297 FREDFSIAARGGGIPHPLRNWRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLI 356
>UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Janibacter sp. HTCC2649
Length = 514
Score = 70.1 bits (164), Expect = 6e-11
Identities = 36/98 (36%), Positives = 55/98 (56%)
Frame = +1
Query: 469 SSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 648
++ L DS ++ +G +TGSGKT A++LP + ++ R+ P AL+LAPTRELA
Sbjct: 46 AATLPDSLAGRDVLGRGRTGSGKTYAFLLPMLARLSAGGTRRQAKRPRALILAPTRELAI 105
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
QI + A + + VFGG + Q + RGV+
Sbjct: 106 QIDEALAPLAQPLGITSKTVFGGVGQGPQVNAITRGVD 143
>UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 44; n=1; Arabidopsis thaliana|Rep: Putative
DEAD-box ATP-dependent RNA helicase 44 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 622
Score = 70.1 bits (164), Expect = 6e-11
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIR---RGDGPIALVLAPTRELAQQIQQVAA 669
++ IG++ TGSGKT A++LP + +I+ PP+R + +GP ALV+ PTRELA QI++
Sbjct: 248 RDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETV 307
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
F + + G +QA L +G E
Sbjct: 308 KFSRYLGFKAVSITGWESIEKQALKLSQGCE 338
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 69.7 bits (163), Expect = 8e-11
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 10/96 (10%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHI----------NNQPPIRRGDGPIALVLAPTRELAQ 648
++ + AQTGSGKT A+++P + + +N+P RR P+ LVLAPTRELA
Sbjct: 305 RDLMSCAQTGSGKTAAFLVPILNRMLEQGASMNPASNRPYQRRKQYPLGLVLAPTRELAT 364
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 756
QI + A F + S +R ++GG EQ R+L+RG
Sbjct: 365 QIYEEAKKFSYRSRMRPAVLYGGNNTSEQMRELDRG 400
Score = 39.5 bits (88), Expect = 0.096
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
V +G +V I F++ + ++ +K Y +PTP+Q PI +SG++L++
Sbjct: 255 VEATGQQVPEHITSFDDIKLTEIIRTNIKMARYDKPTPVQKYAIPIILSGRDLMS 309
>UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; n=1;
Trichomonas vaginalis G3|Rep: DEAD/DEAH box helicase
family protein - Trichomonas vaginalis G3
Length = 1123
Score = 69.7 bits (163), Expect = 8e-11
Identities = 34/89 (38%), Positives = 55/89 (61%)
Frame = +1
Query: 487 SYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
+Y ++ IG+A+TGSGKT +YI+PAI H+ Q +GP L++APT+ELAQQI+ A
Sbjct: 776 AYAGRDLIGIAKTGSGKTASYIIPAIKHVMLQ---NGREGPHVLIIAPTKELAQQIEIKA 832
Query: 667 ADFGHTSYVRNTCVFGGAPKREQARDLER 753
S ++ ++ +REQ +++
Sbjct: 833 NQLLENSPIKAVAIYASPNRREQINAVKK 861
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 69.3 bits (162), Expect = 1e-10
Identities = 37/88 (42%), Positives = 51/88 (57%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ I +QTGSGKT A++LP I + P + L PTRELA QI + F
Sbjct: 159 EDLIVTSQTGSGKTAAFMLPVITQLIGTC---HSPNPSCVALCPTRELAIQIFEETRKFC 215
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ ++ TCVFGGAP EQ R+L RG++
Sbjct: 216 KGTDLKTTCVFGGAPITEQIRNLSRGID 243
>UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 588
Score = 69.3 bits (162), Expect = 1e-10
Identities = 31/59 (52%), Positives = 46/59 (77%), Gaps = 4/59 (6%)
Frame = +1
Query: 496 WKEFIGVAQTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQIQQ 660
+++F+GVA TGSGKTLA+++P ++ ++ PP ++ DGP AL+LAPTREL QQIQ+
Sbjct: 214 YRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALILAPTRELVQQIQK 272
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 68.9 bits (161), Expect = 1e-10
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQVAA 669
++ + AQTGSGKT A+ P I I R G P AL+L+PTREL+ QI + A
Sbjct: 158 RDLMACAQTGSGKTAAFCFPIICGILRNQLSRGGARLACPTALILSPTRELSCQIHEEAK 217
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
F + + ++ +GGAP +Q R+LERGV+
Sbjct: 218 KFSYKTGLKVVVAYGGAPISQQFRNLERGVD 248
Score = 37.1 bits (82), Expect = 0.51
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +2
Query: 320 EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 499
E+EE + + + + I + + + + Q ++ Y +PTPIQ PIAM+G
Sbjct: 98 ELEEVEDTNGGLSINFDAYEDIPVEAKIHLGEGLNQNIRRCKYVKPTPIQRHAIPIAMAG 157
Query: 500 KNLLA 514
++L+A
Sbjct: 158 RDLMA 162
>UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 411
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/88 (39%), Positives = 48/88 (54%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+ ++
Sbjct: 78 RDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEML 137
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
V GG P Q L G +
Sbjct: 138 DVIRCPGNPVCGGVPVSTQTIALREGAD 165
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/98 (27%), Positives = 47/98 (47%)
Frame = +2
Query: 275 NFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKE 454
++YD + V + S V+E R + + + G + PI+ F + N P + + ++
Sbjct: 3 SYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQV 62
Query: 455 PTPIQAQGWPIAMSGKNLLA*LKRVPAKRWPTSCQPLC 568
PTPIQ Q MSG++++ + K S PLC
Sbjct: 63 PTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSL-PLC 99
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPP-----IRRGDGPIALVLAPTRELAQQIQQVA 666
+ IG+AQTGSGKT+AY+LP ++ I +Q ++ +GP L+L PTRELA QI+
Sbjct: 133 DVIGIAQTGSGKTIAYLLPGLIQITSQKTEELNNTKKQNGPQMLILVPTRELAMQIESEI 192
Query: 667 ADFGHTSYVRNTCVFGGAPKRE 732
F ++ C++GG R+
Sbjct: 193 QLFTQNYRLKTLCIYGGINNRK 214
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A+TGSGKT+A+++P I ++ N+P + +GP L+LAP RELA QI+ A
Sbjct: 180 RDMIGIAETGSGKTIAFLIPLISYVGNKPILDYKTSQEGPYGLILAPARELALQIEDEAQ 239
Query: 670 DFGHTSY----VRNTCVFGGAPKREQARDLERGVE 762
+ ++ +R + GG +QA L +GVE
Sbjct: 240 KLLNKTHELKRIRTLSIVGGRNIDQQAFSLRKGVE 274
Score = 44.8 bits (101), Expect = 0.003
Identities = 17/60 (28%), Positives = 39/60 (65%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R ++ + V G +V NPI+ +++ + + + ++ +GY++PTPIQ Q PI + ++++
Sbjct: 124 FREDYSINVRGKDVPNPIRNWKDCHVLEIQTELIRNIGYEKPTPIQMQCIPIGLKLRDMI 183
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A+TGSGKT ++++P + +I+ P + + GP AL+L PTRELAQQI+
Sbjct: 305 RDLIGIAETGSGKTASFLIPLLAYISKLPKLDEHTKALGPQALILVPTRELAQQIETETN 364
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
F +R + GG +QA L G E
Sbjct: 365 KFAGRLGLRCVSIVGGRDMNDQAYALRDGAE 395
Score = 46.0 bits (104), Expect = 0.001
Identities = 17/60 (28%), Positives = 35/60 (58%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R + ++ G + P++ + E+ P + ++ +GYKEP+PIQ Q PI + ++L+
Sbjct: 249 FREDFGISARGGNIPKPLRSWRESGIPASILSTIEEVGYKEPSPIQRQAIPIGLQNRDLI 308
>UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 654
Score = 68.1 bits (159), Expect = 2e-10
Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 6/116 (5%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPI----RRG 600
+ G A + L + K+ +G A+TG GKTLA++LP + + P+ RR
Sbjct: 99 RKKGFDALFAIQAETLEIALSGKDVVGRARTGCGKTLAFVLPIVEEMAKISPMPANGRRV 158
Query: 601 DG--PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
G P+ +VLAPTRELA+Q+ G++ ++ CV+GG P REQ L G +
Sbjct: 159 QGRRPMCVVLAPTRELAKQVFADFDWIGNSFGFKSVCVYGGTPYREQEMGLRGGCD 214
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+AQTGSGKT A+ LP + I RR AL+LAPTRELA QI+Q +
Sbjct: 125 QDILGIAQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTIRNVS 184
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
++++ V GG K Q + + G++
Sbjct: 185 KSAHISTALVLGGVSKLSQIKRIAPGID 212
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 67.7 bits (158), Expect = 3e-10
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVH---INNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 669
++ +G+AQTG+GKT A+ LP + H + +P R AL+L+PTRELA QI + A
Sbjct: 42 RDMLGIAQTGTGKTAAFALPLLHHLMTVGGKPTTRTTK---ALILSPTRELAVQIAESIA 98
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
D + + + VFGG R Q + L RGV+
Sbjct: 99 DLSEGTPISHCVVFGGVSVRPQIQALARGVD 129
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/86 (40%), Positives = 49/86 (56%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + AQTG+GKTLA++LP I ++ +P R G AL+L PTRELA QI +
Sbjct: 40 KDIVATAQTGTGKTLAFLLPTIQLLSTEP---RQPGVRALILTPTRELALQINEALLQIA 96
Query: 679 HTSYVRNTCVFGGAPKREQARDLERG 756
+ +R GG +R Q RD+ G
Sbjct: 97 RGTGIRAAVAVGGLNERSQLRDIRGG 122
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 67.7 bits (158), Expect = 3e-10
Identities = 39/104 (37%), Positives = 53/104 (50%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G + + + + K+ IG A TG+GKT A++LP I + +P R ALV
Sbjct: 23 GFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLIDRLAGKPGTR------ALV 76
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 753
LAPTRELA QI + FGH VR + GG +QA L +
Sbjct: 77 LAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALRQ 120
Score = 33.9 bits (74), Expect = 4.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F E + ++ G++ PTPIQAQ P A++GK+++
Sbjct: 6 FAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVI 45
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/88 (38%), Positives = 48/88 (54%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + AQTG+GKT A+ LP + + P GP LVL PTREL Q++ DFG
Sbjct: 39 RDLVASAQTGTGKTAAFALPVLARLGGHRP----GGPRVLVLEPTRELGAQVETAFRDFG 94
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ VR+T + GG +Q DL G +
Sbjct: 95 RFTDVRSTIIHGGVGYGKQRSDLRAGTD 122
Score = 42.3 bits (95), Expect = 0.014
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F + P + +GV+ MGY +PTP+Q + P+ ++G++L+A
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVA 43
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 67.7 bits (158), Expect = 3e-10
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADF 675
++ G AQTG+GKT A++L + N P R G P ALVLAPTRELA QIQ+ A
Sbjct: 163 RDLAGKAQTGTGKTAAFLLAVFTRLLNHPLEERKPGCPRALVLAPTRELAMQIQKDAEVL 222
Query: 676 GHTSYVRNTCVFGGAPKREQARDLERGVE 762
+ + + VFGG +Q R LE+ V+
Sbjct: 223 EIFTGLTSVVVFGGMDHEKQRRSLEQPVD 251
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 67.7 bits (158), Expect = 3e-10
Identities = 37/85 (43%), Positives = 50/85 (58%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +G+A+TGSGKT A+ +P + Q ALVLAPTRELA QI++ G
Sbjct: 136 KDIVGIAETGSGKTAAFAIPIL-----QTLYTAAQPYYALVLAPTRELAFQIKETFDALG 190
Query: 679 HTSYVRNTCVFGGAPKREQARDLER 753
+ +R+ C+ GG EQARDL R
Sbjct: 191 SSMGLRSVCIIGGMSMMEQARDLMR 215
Score = 35.1 bits (77), Expect = 2.1
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+Q F E + + + ++++ Y +PTPIQA P A+ GK+++
Sbjct: 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIV 139
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 67.7 bits (158), Expect = 3e-10
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAA 669
++ IGVA+TGSGKT ++++P I +I P + + +GP L+LAPTRELA QI+ A
Sbjct: 201 RDVIGVAETGSGKTASFLIPLISYICELPKLDERSKVNGPYGLILAPTRELAMQIKDEAV 260
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
F + V GG +EQA ++ G E
Sbjct: 261 KFCAPLGFKVVSVVGGYSAQEQALAVQEGAE 291
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEAN-FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
VT G + NP++ + E P V+ + MGYKEPTPIQ PIA+ ++++
Sbjct: 150 VTKGGGNIPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGIRDVI 204
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 67.3 bits (157), Expect = 4e-10
Identities = 35/88 (39%), Positives = 49/88 (55%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+AQTG+GKT ++ LP + + P +G LVLAPTREL QI F
Sbjct: 45 RDLLGLAQTGTGKTASFALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFS 104
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
VR T +FGG + Q + LE GV+
Sbjct: 105 RHQPVRVTTIFGGVSQVHQVKALEEGVD 132
Score = 33.9 bits (74), Expect = 4.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 386 QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
Q F + + + + GY +PTPIQAQ P+ + G++LL
Sbjct: 7 QAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLL 48
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Magnaporthe grisea|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 674
Score = 67.3 bits (157), Expect = 4e-10
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPP---IRRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+++TGSGKT A++LP + +I PP + + +GP AL+LAPTRELA QIQ
Sbjct: 295 RDLIGISKTGSGKTAAFVLPMLSYIEPLPPLNEVTKTEGPYALILAPTRELATQIQAEVI 354
Query: 670 DFGHTSYVRNTCVFGGAPK-REQARDLERGVE 762
F C+ G E A L G E
Sbjct: 355 KFATRMGFTVVCLIGNKRTIEEDAFALRNGAE 386
Score = 55.6 bits (128), Expect = 1e-06
Identities = 21/60 (35%), Positives = 39/60 (65%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
++ N E+ G + NP++++EE+N P ++ +K +GY EPTP+Q PIA+ ++L+
Sbjct: 239 FKVNLEIVTKGNNIPNPMRFWEESNLPHVLKDTIKQVGYTEPTPVQRAAIPIALQCRDLI 298
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 67.3 bits (157), Expect = 4e-10
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 10/96 (10%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAI---VHINNQPP-------IRRGDGPIALVLAPTRELAQ 648
++ + AQTGSGKT A+++P + + + PP RR P+ LVLAPTRELA
Sbjct: 333 RDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELAT 392
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 756
QI + A F + S +R ++GG EQ R+L+RG
Sbjct: 393 QIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRG 428
Score = 36.7 bits (81), Expect = 0.68
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
V +G V I F++ + ++ V Y +PTP+Q PI ++G++L+A
Sbjct: 283 VEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMA 337
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 66.9 bits (156), Expect = 6e-10
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Frame = +1
Query: 421 ATRCKDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHI---NNQPPI 591
A R + G+ + L + K+ IG A+TG+GKTLA+ LP I ++ + +
Sbjct: 12 AARLAERGITEASPIQAESLPHTLAGKDLIGRARTGTGKTLAFALPIIQNLTAPDGRGSR 71
Query: 592 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
RG P A+V+APTRELA+Q+ + + G + V+GGA Q L RGV+
Sbjct: 72 ERGRLPRAIVIAPTRELAKQVAEEFSKSG--PQLSTVTVYGGAAYGPQENALRRGVD 126
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 66.9 bits (156), Expect = 6e-10
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQVAADF 675
++ +G A TG+GKT A+ LP + + + R GD GP ALVL PTRELA Q+ + +
Sbjct: 95 RDLLGQAATGTGKTAAFALPLLHRLTDD---RTGDHGPQALVLVPTRELAVQVSEAIHRY 151
Query: 676 GHTSYVRNTCVFGGAPKREQARDLERGVE 762
G R V+GGAP Q R L +GV+
Sbjct: 152 GRDLGARVLPVYGGAPIGRQVRALVQGVD 180
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 66.9 bits (156), Expect = 6e-10
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +1
Query: 496 WKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 675
WK+ I A TG+GKT A+ +P + HI+ + D ALVLAPTRELA QIQ D
Sbjct: 49 WKDVIAKAPTGTGKTFAFGIPMVEHIDPE-----SDAVQALVLAPTRELALQIQDELRDL 103
Query: 676 -GHTSYVRNTCVFGGAPKREQARDLER 753
VR+ C++GGAP +Q L++
Sbjct: 104 CEFKEGVRSVCLYGGAPIEKQITTLKK 130
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 66.9 bits (156), Expect = 6e-10
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 675
+ +G+AQTG+GKT A++LP + I N P R ALVLAPTRELA QI A +
Sbjct: 96 DLVGIAQTGTGKTAAFVLPILHRIAANRARPAPRACR--ALVLAPTRELATQIADAARTY 153
Query: 676 GHTSYVRNTCVFGGAPKREQARDLERGVE 762
G + V GGA QAR +E GV+
Sbjct: 154 GKFTRPSVAVVIGGAKPGPQARRMESGVD 182
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 66.9 bits (156), Expect = 6e-10
Identities = 37/86 (43%), Positives = 48/86 (55%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG AQTG+GKT A+ LP + ++ P LVL+PTRELA QI Q +G
Sbjct: 35 DLIGCAQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQIAQSFNVYGR 94
Query: 682 TSYVRNTCVFGGAPKREQARDLERGV 759
R T +FGG + Q R L+RGV
Sbjct: 95 NVKFRLTTIFGGVGQNPQVRALKRGV 120
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 66.9 bits (156), Expect = 6e-10
Identities = 40/109 (36%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIAL 618
G+++ + L + ++ IG A+TG+GKTLA+ +P I I RG P+ L
Sbjct: 123 GIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCL 182
Query: 619 VLAPTRELAQQIQQVAADFGHTSYVRNT-CVFGGAPKREQARDLERGVE 762
VLAPTRELA+Q+++ +F ++ +T C++GG P +Q R L+ GV+
Sbjct: 183 VLAPTRELARQVEK---EFRESAPSLDTICLYGGTPIGQQMRQLDYGVD 228
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 66.5 bits (155), Expect = 7e-10
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFG 678
+ +G AQTG+GKT A+ +P + + + +G I ALVLAPTRELA QI + +G
Sbjct: 40 DLLGCAQTGTGKTAAFAIPILQSLAMGQGLLKGKRQIRALVLAPTRELATQIAESFTAYG 99
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R +FGG + Q R LE+G++
Sbjct: 100 VNLPLRTLVIFGGVGQAPQTRKLEKGID 127
>UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 865
Score = 66.5 bits (155), Expect = 7e-10
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 508 IGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 687
+G+AQTGSGKT AY++PAI ++ NQ R GP L++A TREL +QIQ+ +
Sbjct: 527 VGIAQTGSGKTAAYLIPAITYVINQNKKR---GPHVLIMANTRELVKQIQEFGEILTKNT 583
Query: 688 YVRNTCVFGGA-PKREQARDL 747
V+ +GG +R+Q RD+
Sbjct: 584 SVKVAVAYGGENNRRQQIRDI 604
Score = 41.1 bits (92), Expect = 0.032
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +2
Query: 311 SPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIA 490
S E E+++ + + G H Q+ + P+ Q V+ + EPTPIQ PI
Sbjct: 462 SDQEFEDFKIRENIKIIGDCPHRLFQFNPQMMLPELFQN-VREQNWTEPTPIQKIAIPIV 520
Query: 491 MSGKNLL 511
MSG NL+
Sbjct: 521 MSGMNLV 527
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 66.5 bits (155), Expect = 7e-10
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADF 675
++ + AQTG+GKT + LP + H+ + P +G P+ AL+L PTRELA QI + D+
Sbjct: 39 RDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDY 98
Query: 676 GHTSYVRNTCVFGGAPKREQARDLERGVE 762
+R+ VFGG Q L GV+
Sbjct: 99 SKYLNIRSLVVFGGVSINPQMMKLRGGVD 127
Score = 37.1 bits (82), Expect = 0.51
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 410 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
PD + + V GY+EPTPIQ Q P + G++L+A
Sbjct: 10 PD-ILRAVAEQGYREPTPIQQQAIPAVLEGRDLMA 43
>UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 558
Score = 66.1 bits (154), Expect = 1e-09
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 675
K+ + AQTGSGKTLAY+LP I I N P ++R DG L+L PTREL QQ+ V
Sbjct: 46 KDCLVKAQTGSGKTLAYLLPTITMILNKHPKLKRTDGLFCLILTPTRELTQQVYDVLTIL 105
Query: 676 GHTSYVR--NTCVFGGAPKREQARDLERGV 759
TS + + V GG K+ + + +GV
Sbjct: 106 -TTSIIGLVPSIVVGGDSKKSEKARIRKGV 134
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 66.1 bits (154), Expect = 1e-09
Identities = 36/88 (40%), Positives = 55/88 (62%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+AQTG+GKT A++LP + + P RG A+++ PTRELA+QIQ V G
Sbjct: 39 RDVIGIAQTGTGKTAAFVLPILQRLMRGP---RGRVR-AMIVTPTRELAEQIQGVIEALG 94
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ +R+ ++GG + Q + L RGVE
Sbjct: 95 KYTGLRSVTLYGGVGYQGQIQRLRRGVE 122
Score = 36.3 bits (80), Expect = 0.90
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F+ F + G++ +GY PTPIQ Q P A+ G++++
Sbjct: 3 FDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVI 42
>UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3;
Actinobacteria (class)|Rep: ATP-dependent RNA helicase -
marine actinobacterium PHSC20C1
Length = 757
Score = 65.7 bits (153), Expect = 1e-09
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Frame = +1
Query: 469 SSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHI--NNQPPIRR-GDGPIALVLAPTRE 639
++ + D K+ +G +TGSGKT+A+ P + + NN R+ G P AL+LAPTRE
Sbjct: 400 AATIPDVLAGKDVLGRGKTGSGKTIAFGAPLVERLMENNGGKDRQMGRKPRALILAPTRE 459
Query: 640 LAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
LAQQI + + + T + GG P+ +Q L RGV+
Sbjct: 460 LAQQIDRTIQPIARSVGLFTTTIVGGVPQYKQVAALTRGVD 500
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 65.7 bits (153), Expect = 1e-09
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+AQTG+GKT A+ LP + +I+ + +R P ALVL PTRELAQQ+ + +G
Sbjct: 47 RDVVGLAQTGTGKTAAFALPILANIDVK--VR---SPQALVLCPTRELAQQVAEAFRSYG 101
Query: 679 H-TSYVRNTCVFGGAPKREQARDLERG 756
+R +FGGA R+Q + L G
Sbjct: 102 RGMGGLRILSIFGGADMRQQLKSLREG 128
Score = 38.3 bits (85), Expect = 0.22
Identities = 13/40 (32%), Positives = 27/40 (67%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F PD++Q+ ++++GY+ TPIQA P+ + G++++
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVV 50
>UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 -
Leishmania major
Length = 544
Score = 65.7 bits (153), Expect = 1e-09
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADFG 678
+ IG+A TGSGKT+A+ +PA+ + P DG P LVLAPTREL QQ +V + G
Sbjct: 132 DVIGLAPTGSGKTVAFAVPALAGLKPNP-----DGTPSVLVLAPTRELVQQTTKVFQNLG 186
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
VR +GGAP+ QAR L G +
Sbjct: 187 -CGQVRVCEAYGGAPRDLQARHLRNGCD 213
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 65.7 bits (153), Expect = 1e-09
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 10/96 (10%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVH-INNQPP---------IRRGDGPIALVLAPTRELAQ 648
++ + AQTGSGKT A++ P ++ +N+ PP I+R P+ALVL+PTRELA
Sbjct: 239 RDLMACAQTGSGKTAAFLFPIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELAI 298
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 756
Q + + F + +R ++GG+ R Q DL+RG
Sbjct: 299 QTYEESRKFCFGTGIRTNVLYGGSEVRSQIMDLDRG 334
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 65.7 bits (153), Expect = 1e-09
Identities = 37/85 (43%), Positives = 50/85 (58%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +GVA+TGSGKT A+ +PAI H+ N R G LV++PTRELA QI
Sbjct: 150 KDVVGVAETGSGKTFAFGVPAISHLMNDQKKR---GIQVLVISPTRELASQIYDNLIVLT 206
Query: 679 HTSYVRNTCVFGGAPKREQARDLER 753
++ CV+GG PK EQ L++
Sbjct: 207 DKVGMQCCCVYGGVPKDEQRIQLKK 231
Score = 36.7 bits (81), Expect = 0.68
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 278 FYDPHPTVLKRSPYEVEEYRNNHEVTVS-GVEVH-NPIQYFEEANFPDYVQQGVKTMGYK 451
FY + +++EY +E+ V +++ P+ F+ + +Q + +
Sbjct: 76 FYVQSEALTSLPQSDIDEYFKENEIAVEDSLDLALRPLLSFDYLSLDSSIQAEISK--FP 133
Query: 452 EPTPIQAQGWPIAMSGKNLL 511
+PTPIQA WP +SGK+++
Sbjct: 134 KPTPIQAVAWPYLLSGKDVV 153
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 65.3 bits (152), Expect = 2e-09
Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPP----------IRRGDGPIALVLAPTRELAQ 648
++ + AQTGSGKT ++ P + P R P ALVLAPTRELA
Sbjct: 192 RDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELAT 251
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
QI + A F + S+VR V+GGAP Q R+++RG +
Sbjct: 252 QIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCD 289
Score = 40.3 bits (90), Expect = 0.055
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 338 NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
+N V SG +V PI F + + + +K + +PTP+Q PI G++L+A
Sbjct: 138 DNIPVDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMA 196
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +G+AQTG+GKT A+ LP + N+ +R P LVLAPTRELAQQ+ +
Sbjct: 44 KDVLGLAQTGTGKTAAFTLPLLARTQNE--VRE---PQVLVLAPTRELAQQVAMAVESYS 98
Query: 679 -HTSYVRNTCVFGGAPKREQARDLERG 756
H S V+ ++GG+ Q R L++G
Sbjct: 99 KHESNVKVASIYGGSDFGSQFRALKQG 125
Score = 33.1 bits (72), Expect = 8.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F P + + ++ GY++P+PIQ Q P + GK++L
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVL 47
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIR-------RGDGPIALVLAPTRELAQQIQ 657
++ + AQTGSGKT A+++P + + P + + P+AL+LAPTRELA QI
Sbjct: 249 RDLMACAQTGSGKTAAFLIPLLSMMYQDGPGNSLSHSGYKKEYPVALILAPTRELAVQIY 308
Query: 658 QVAADFGHTSYVRNTCVFGGAPKREQARDLERG 756
A F + S VR V+GG R Q +D+ +G
Sbjct: 309 DEARKFSYRSLVRPCVVYGGRDIRGQLQDISQG 341
>UniRef50_Q4SWK6 Cluster: Chromosome 12 SCAF13614, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 12 SCAF13614, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1027
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Frame = +1
Query: 517 AQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQ----IQQVAADFGH 681
+QTGSGKTL+Y +P + + QP + RGDGP+AL+L PTRELAQQ Q++ F
Sbjct: 124 SQTGSGKTLSYAIPVVQSLQALQPKVSRGDGPLALILVPTRELAQQTFVTFQKLLKPF-- 181
Query: 682 TSYVRNTCVFGGAPKREQARDLERGV 759
++V + GG ++ + L +G+
Sbjct: 182 -TWVVPGVLMGGEKRKAEKARLRKGI 206
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-AL 618
G ++ + + ++ +G AQTG+GKT A+ P + + P R PI +L
Sbjct: 20 GYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQRLGGDIPAGR---PIRSL 76
Query: 619 VLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+L PTRELA QIQ+ +G +R+ +FGG ++ Q L++GV+
Sbjct: 77 ILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKKGVD 124
>UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 527
Score = 64.5 bits (150), Expect = 3e-09
Identities = 44/113 (38%), Positives = 58/113 (51%)
Frame = +1
Query: 415 LCATRCKDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIR 594
LCA C D G Q +S + ++ IGVAQTGSGKT AY LP + + Q R
Sbjct: 64 LCAA-CADAGWQHPTRIQASTITVFAEGRDLIGVAQTGSGKTGAYALPLVNWLLAQ---R 119
Query: 595 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 753
+ LV+ PTRELAQQ+ G + +R + GGA EQA +L +
Sbjct: 120 KTPYLSVLVMVPTRELAQQVTAQFVLLGRSVGLRVATLVGGADMVEQACELSK 172
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 64.5 bits (150), Expect = 3e-09
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQP---PIRRGD 603
K+ G+ + L ++ IG+A TGSGKTL ++LP I+ + PI G+
Sbjct: 162 KEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGE 221
Query: 604 GPIALVLAPTRELAQQ----IQQVAADFGHTSY--VRNTCVFGGAPKREQARDLERGV 759
GPI L++ P+RELA+Q ++Q A Y +R+ GG R Q ++RGV
Sbjct: 222 GPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGV 279
Score = 50.4 bits (115), Expect = 5e-05
Identities = 23/77 (29%), Positives = 43/77 (55%)
Frame = +2
Query: 281 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 460
+ P + K S + + R + V+G ++ PI+ F++ FP V +K G +PT
Sbjct: 111 WKPPLHIRKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPT 170
Query: 461 PIQAQGWPIAMSGKNLL 511
PIQ QG P+ ++G++++
Sbjct: 171 PIQVQGLPVILAGRDMI 187
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 64.5 bits (150), Expect = 3e-09
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPI-------RRGDGPIALVLAPTRELAQQIQ 657
K+ +G+A+TGSGKT A+ LPA+ H+ + + +G LV+APTRELA Q +
Sbjct: 197 KDVVGIAETGSGKTFAFGLPALQHLVTKHKVLDSGKKKAKGAQVNVLVIAPTRELAIQTE 256
Query: 658 QVAADFGHTSYVRNTCVFGGAPKREQARDLER 753
+ A G + + C++GG K+EQ R L +
Sbjct: 257 ENMAKLGKSMGIGMICLYGGVSKQEQVRLLNQ 288
Score = 34.3 bits (75), Expect = 3.6
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +2
Query: 311 SPYEVEEYRNNHEVTVSGVEVHN-----PIQYFEEAN--FPDYVQQGVKTMGYKEPTPIQ 469
+P + +H +T+ E N P+ F E + V++ + + G+ PTPIQ
Sbjct: 127 NPAAARAFVESHNITIEAPEESNERPPLPMVDFRELDGKVDAAVKKTLDSQGFSTPTPIQ 186
Query: 470 AQGWPIAMSGKNLL 511
A WP+ + K+++
Sbjct: 187 ACCWPVLLQNKDVV 200
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 64.1 bits (149), Expect = 4e-09
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 517 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSYV 693
+ TGSGKT A++LP+I + +P ++ GP LVL PTRELA Q+++ A +G
Sbjct: 45 SHTGSGKTAAFLLPSIQRLLAEPAVK-SIGPRVLVLTPTRELALQVEKAAMTYGKEMRRF 103
Query: 694 RNTCVFGGAPKREQARDLERGVE 762
R C+ GGAP Q + L + V+
Sbjct: 104 RTACLVGGAPYGLQLKRLSQPVD 126
Score = 33.5 bits (73), Expect = 6.3
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F E + + V GY+ TP+Q Q P A+SG +LL
Sbjct: 3 FSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLL 42
>UniRef50_Q5ENJ0 Cluster: Chloroplast RNA helicase; n=1; Heterocapsa
triquetra|Rep: Chloroplast RNA helicase - Heterocapsa
triquetra (Dinoflagellate)
Length = 324
Score = 64.1 bits (149), Expect = 4e-09
Identities = 47/116 (40%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Frame = +1
Query: 445 LQRTDAYSSSRLADSYVW------KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 606
LQR + S++ Y W ++ IGVA TGSGKTLA++LP + H+ Q G
Sbjct: 121 LQRAGFPAPSQI-QQYTWPLAAQMRDTIGVAATGSGKTLAFLLPGMAHVAAQV----GTE 175
Query: 607 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG----APKREQARDLERGVE 762
P LVLAPTREL QI A F +R FGG + Q+R L RGV+
Sbjct: 176 PRMLVLAPTRELVMQIATEAEQFALGFRLRLGLAFGGQDGEGDQMMQSRVLRRGVD 231
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 64.1 bits (149), Expect = 4e-09
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPI--RRGDGPIALVLAPTRELAQQIQQVAAD 672
++ G AQTG+GKTLA+++ + + ++P + R + P AL+LAPTRELA QI A
Sbjct: 47 RDIAGQAQTGTGKTLAFLVVVVNRLLSRPGLVNRNPEDPRALILAPTRELAIQIYNDAVK 106
Query: 673 FGHTSYVRNTCVFGGAPKREQARDLERGVE 762
FG +R ++GG +Q L +G +
Sbjct: 107 FGGNLGLRFALIYGGVDYDKQREMLRKGAD 136
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ I A+TG+GKTL+++LP +V Q P + G PI L LAPTRELA+QI + G
Sbjct: 141 DVIAQARTGTGKTLSFVLP-LVEKWQQFPQKSGRQPIILALAPTRELAKQISEYFEAIG- 198
Query: 682 TSYVRNTCVFGGAPKREQARDLERGVE 762
++ TC++GG Q + RG++
Sbjct: 199 -PHLSTTCIYGGTSYWPQESAIRRGLD 224
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 63.7 bits (148), Expect = 5e-09
Identities = 34/88 (38%), Positives = 48/88 (54%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + AQTG+GKT A+ LP I + + +R P AL+L PTRELAQQ+ +
Sbjct: 45 KDLLAAAQTGTGKTAAFGLPIIQAVQQK---KRNGTPHALILVPTRELAQQVFDNLTQYA 101
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ +R CV+GG Q LE G +
Sbjct: 102 EHTDLRIVCVYGGTSIGVQKNKLEEGAD 129
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG AQTG+GKT A+ LP + I +P +++ P AL+L PTRELA Q+ + F
Sbjct: 42 DIIGQAQTGTGKTAAFGLPIVQKI--EPGLKK---PQALILCPTRELAIQVNEEIKSFCK 96
Query: 682 TSYVRNTCVFGGAPKREQARDLERGVE 762
+ ++GGAP +Q R L++GV+
Sbjct: 97 GRGITTVTLYGGAPIMDQKRALKKGVD 123
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHIN----NQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
++ + AQTGSGKT A+++P I H+ NQ + P L+LAPTRELA QI +
Sbjct: 222 RDIMACAQTGSGKTAAFLIPIINHLVCQDLNQQRYSKTAYPKCLILAPTRELAIQILSES 281
Query: 667 ADFGHTSYVRNTCVFGGAPKREQARDLERG 756
F + +R+ V+GGA Q R+++ G
Sbjct: 282 QKFSLNTPLRSCVVYGGADTHSQIREVQMG 311
>UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1;
Dugesia japonica|Rep: Putative RNA helicase protein -
Dugesia japonica (Planarian)
Length = 515
Score = 63.7 bits (148), Expect = 5e-09
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPP------IRRGDG----PIALVLAPTRELAQQ 651
+ +G A+TGSGKT+AY+ P + +I P +++ D P+ LVLAPTREL Q
Sbjct: 133 DILGSAETGSGKTIAYLAPLLNNIMKHYPEEMMNELKQNDEELQYPLLLVLAPTRELVNQ 192
Query: 652 IQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 756
I VA +++R+ V GG R Q D RG
Sbjct: 193 ITSVAKTLLKLTHLRSVSVIGGVDARSQINDASRG 227
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 63.7 bits (148), Expect = 5e-09
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQ---PPIR-RGDGPIALVLAPTRELAQQIQQVAA 669
+ IGVA+TGSGKT Y+LP ++ I Q R R +GP L+LAPTREL QI Q +
Sbjct: 139 DLIGVAETGSGKTFGYLLPGLIQIKCQNYGSNFRNRINGPEILILAPTRELVMQIAQQVS 198
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLER 753
F + + +GG + +QA+ ++R
Sbjct: 199 LFMKPNNLTVATAYGGQNRDQQAQQIKR 226
Score = 39.5 bits (88), Expect = 0.096
Identities = 17/81 (20%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +2
Query: 278 FYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHN---PIQYFEEANFPDYVQQGVKTMGY 448
++ P + P +V+++ +E+ + ++ P + FP +Q + + +
Sbjct: 61 YFQPQQLASQPMPEKVKDFLKANEIAIKAIDGQPCPYPFLTWGGTQFPPQIQNVIDGLNF 120
Query: 449 KEPTPIQAQGWPIAMSGKNLL 511
+ PTPIQ+ +P+ +SG +L+
Sbjct: 121 RAPTPIQSVVFPLILSGYDLI 141
>UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 605
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 9/97 (9%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINN---QP-PIRRGDGPIALVLAPTRELAQQIQQ-- 660
++ +G+A TGSGKTLA+++P ++ + +P ++ +GP AL+LAPTRELAQQIQ
Sbjct: 227 RDLMGIASTGSGKTLAFVIPILIKLLGTAIRPLSLKVIEGPKALILAPTRELAQQIQAEI 286
Query: 661 ---VAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
++ + + + C+ GG E + DL +G +
Sbjct: 287 KKILSLSSNELTKITSICIVGGHSIEEISYDLSKGCD 323
>UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-dependent RNA helicase -
Sulfurovum sp. (strain NBC37-1)
Length = 447
Score = 63.3 bits (147), Expect = 7e-09
Identities = 34/85 (40%), Positives = 50/85 (58%)
Frame = +1
Query: 508 IGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 687
I AQTGSGKTLAY+LPA+ IN + P +L+PT+ELAQQI +V+ F +
Sbjct: 42 IASAQTGSGKTLAYLLPALQQINPEAEKVTHHYPRLFILSPTKELAQQIYEVSRPFVNAL 101
Query: 688 YVRNTCVFGGAPKREQARDLERGVE 762
+ + GG + + L++GV+
Sbjct: 102 DLNVVLLQGGGRRTVETERLKKGVD 126
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 63.3 bits (147), Expect = 7e-09
Identities = 33/85 (38%), Positives = 48/85 (56%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G A+TG+GKT A+ +P I + + P R P AL+L PTRELA Q++ A
Sbjct: 42 RDVLGQARTGTGKTAAFGIPIIERLEHGPNSRN---PQALILTPTRELAVQVRDEIAKLT 98
Query: 679 HTSYVRNTCVFGGAPKREQARDLER 753
H + V+GG P R Q L+R
Sbjct: 99 HGQRINVVAVYGGKPLRSQMEKLKR 123
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 63.3 bits (147), Expect = 7e-09
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADF 675
K I AQTG+GKT A+ LP I + ++ +G+ I ALV+ PTRELA QI + +
Sbjct: 39 KNVIVAAQTGTGKTAAFALPIINLLFDKQDAEKGEKKIKALVITPTRELAIQILENFKSY 98
Query: 676 GHTSYVRNTCVFGGAPKREQARDLERGVE 762
S +R+T VFGG Q L +GV+
Sbjct: 99 SKYSNLRSTAVFGGVSLEPQKEILAKGVD 127
>UniRef50_A0K1H7 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Arthrobacter sp. (strain FB24)
Length = 635
Score = 63.3 bits (147), Expect = 7e-09
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = +1
Query: 478 LADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPP--IRRGDGPIALVLAPTRELAQQ 651
L D+ ++ +G +TGSGKT+A+ +P + + + R+ P+ LVLAPTRELA Q
Sbjct: 33 LPDTLAGRDVLGRGRTGSGKTIAFAIPLVARLAEREAKHFRKPGRPMGLVLAPTRELATQ 92
Query: 652 IQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
I + T ++GG + Q + L GV+
Sbjct: 93 INATIEPMAKAMGLNTTVIYGGISQARQEKALRAGVD 129
>UniRef50_UPI00006CB2CD Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 767
Score = 62.9 bits (146), Expect = 9e-09
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Frame = +1
Query: 499 KEFIGV-AQTGSGKTLAYILPAI---VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
KE I + ++TGSGKTL Y++P I VH+ I R DG V+ PTREL Q ++VA
Sbjct: 246 KENIALKSETGSGKTLTYLVPIISNLVHMGTDQKITREDGSYVFVICPTRELCIQCEEVA 305
Query: 667 ADFGHTS-YVRNTCVFGGA-PKREQARDLERGV 759
S Y+ C+ GG PK+E+AR L +GV
Sbjct: 306 QLVTKKSKYLITGCLMGGENPKKEKAR-LRKGV 337
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 62.9 bits (146), Expect = 9e-09
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADFG 678
+ + AQTG+GKT ++ LP I ++ P G P+ ALVLAPTRELA Q+ ++G
Sbjct: 43 DLLAEAQTGTGKTASFALPIIEKLSKNPI--DGYRPVRALVLAPTRELAIQVADNTLEYG 100
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R V+GG P Q + L+RG +
Sbjct: 101 RDLGMRVISVYGGVPVENQIKRLKRGTD 128
Score = 38.3 bits (85), Expect = 0.22
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F E +Q +K +GY++PTPIQ+Q P+ + G +LLA
Sbjct: 6 FAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLA 46
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 62.9 bits (146), Expect = 9e-09
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQP---PIRRGD 603
K G+ A + + ++ IG+A TGSGKT+ ++LP ++ Q P R +
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSE 265
Query: 604 GPIALVLAPTRELAQQIQQVAAD----FGHTSY--VRNTCVFGGAPKREQARDLERGV 759
GP L++ P+RELA+QI + + G +R GG P EQA+D+ G+
Sbjct: 266 GPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGI 323
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 62.9 bits (146), Expect = 9e-09
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 10/97 (10%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A TGSGKTL + LP I+ Q P +R +GP +++ P+RELA+Q +V
Sbjct: 85 RDMIGIAFTGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIVVPSRELARQTFEVIT 144
Query: 670 DF-------GHTSYVRNTCVFGGAPKREQARDLERGV 759
F G S N C+ GG+ +EQ+ ++RGV
Sbjct: 145 HFSRALEAHGFPSLRTNLCI-GGSSIKEQSDAMKRGV 180
Score = 52.0 bits (119), Expect = 2e-05
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +2
Query: 281 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 460
+ P +L ++E R + V G ++ P++ F+E FP + +K G PT
Sbjct: 12 WTPPRYILHMPKEKIERIRKKWHILVEGDDIPPPVKTFKEMKFPRPILAALKKKGITHPT 71
Query: 461 PIQAQGWPIAMSGKNLL 511
PIQ QG P ++G++++
Sbjct: 72 PIQVQGLPAVLTGRDMI 88
>UniRef50_UPI0000E47F75 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 59; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 -
Strongylocentrotus purpuratus
Length = 474
Score = 62.5 bits (145), Expect = 1e-08
Identities = 25/77 (32%), Positives = 46/77 (59%)
Frame = +2
Query: 281 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 460
Y HP + + +P +V++ RN ++ V G+ + PI FE+ P + +++ GY PT
Sbjct: 326 YREHPDISQLAPEQVQDIRNEVQIFVEGINIQRPILEFEQLRLPAKIHSNLQSSGYITPT 385
Query: 461 PIQAQGWPIAMSGKNLL 511
PIQ Q PI+++ ++L+
Sbjct: 386 PIQMQAIPISLALRDLM 402
Score = 48.8 bits (111), Expect = 2e-04
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +1
Query: 487 SYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 663
S ++ + AQT SGKTL++++PA++ I NQ G P L+ PTRELA QI++
Sbjct: 395 SLALRDLMICAQTSSGKTLSFLVPAVMTIYNQVLTGVGSKDPHVLIFTPTRELAMQIEEQ 454
Query: 664 A 666
A
Sbjct: 455 A 455
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 62.5 bits (145), Expect = 1e-08
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAAD- 672
K+ G+AQTG+GKT+A+++P I +I + +G G ALVLAPTREL QI + A
Sbjct: 39 KDITGLAQTGTGKTVAFLIPVIHNI-----LTKGIQGIAALVLAPTRELTMQIAEEAKKL 93
Query: 673 FGHTSYVRNTCVFGGAPKREQARDLE 750
H+ +R+ + GG + Q +DLE
Sbjct: 94 LKHSEGIRSVPIIGGTDYKSQNKDLE 119
>UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2;
Theileria|Rep: RNA helicase, putative - Theileria
annulata
Length = 620
Score = 62.5 bits (145), Expect = 1e-08
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVH---INNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 669
++ IGV+ TG+GKTL +++P I+ I + PI +GP LV+ P+RELA QI +
Sbjct: 227 RDVIGVSSTGTGKTLVFVIPMIMQSWEIELRLPIESREGPFGLVICPSRELASQISDITK 286
Query: 670 DFGHTSYVRN--------TCVFGGAPKREQARDLERGV 759
F T Y+ N +CV GG ++Q ++ GV
Sbjct: 287 YF--TGYIYNYGGPKLYCSCVIGGTDIKDQEFTIKSGV 322
Score = 37.5 bits (83), Expect = 0.39
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +2
Query: 323 VEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 502
V+ RN + VSG +V PI FE+ P + + + EPT IQ Q P + G+
Sbjct: 168 VDSIRNALLIDVSGDQVPPPILNFEDMKLPKPILKALNHKKIFEPTKIQMQALPSVLLGR 227
Query: 503 NLL 511
+++
Sbjct: 228 DVI 230
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/86 (37%), Positives = 49/86 (56%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG A TGSGKTLA+I+P ++H+ QPP + + A++L+PTRELA Q
Sbjct: 139 RDIIGCAVTGSGKTLAFIIPCLLHVLAQPPTGQYEA-AAVILSPTRELAYQTHIECQKIF 197
Query: 679 HTSYVRNTCVFGGAPKREQARDLERG 756
++ C+ GG Q R ++ G
Sbjct: 198 SLMDKKSACLVGGNDIENQLRAIKNG 223
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 PFNKNFYDPHPTVLKRSPYEVEEYRNN-HEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
P KN Y P + +S ++E+ R + V G+ V PI + + P + ++
Sbjct: 59 PIRKNIYIPSSEISSKSQTDIEDLRKRLGNIVVHGLNVLCPIVNWTDCGLPAPLMSHLRL 118
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
G+K+PT IQ Q P +SG++++
Sbjct: 119 RGFKQPTSIQCQAIPCILSGRDII 142
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/95 (33%), Positives = 53/95 (55%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 612
+D G R A ++ + + ++ +G A TG+GKT AY+LPA+ H+ + P + G P
Sbjct: 20 QDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGP-PR 78
Query: 613 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 717
L+L PTRELA Q+ A + +++ + GG
Sbjct: 79 ILILTPTRELAMQVSDHARELAKHTHLDIATITGG 113
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 62.1 bits (144), Expect = 2e-08
Identities = 30/87 (34%), Positives = 49/87 (56%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ +G+AQTG+GKT A+ LP + +++ P L+L PTRELA QI + +
Sbjct: 43 DLLGIAQTGTGKTAAFSLPILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAYSK 102
Query: 682 TSYVRNTCVFGGAPKREQARDLERGVE 762
+++ +FGG + Q R L+ GV+
Sbjct: 103 HLNMKHAVIFGGVGQNPQVRALQGGVD 129
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 62.1 bits (144), Expect = 2e-08
Identities = 33/86 (38%), Positives = 48/86 (55%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G AQTG+GKT A LP + + P+ALVLAPTRELA QI +G
Sbjct: 40 RDVLGCAQTGTGKTAALALPILNQLGKNSRKSIPHHPLALVLAPTRELAIQIGDSFDAYG 99
Query: 679 HTSYVRNTCVFGGAPKREQARDLERG 756
+R+ ++GG + Q + L+RG
Sbjct: 100 RHLKLRSVLIYGGVGQGNQVKALKRG 125
Score = 35.1 bits (77), Expect = 2.1
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F+E VQ+ + YK PTPIQAQ P A+ G+++L
Sbjct: 4 FQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVL 43
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 62.1 bits (144), Expect = 2e-08
Identities = 37/87 (42%), Positives = 49/87 (56%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG+AQTG+GKT AY LP I + + P RG LV+APTRELA QI G
Sbjct: 40 DVIGLAQTGTGKTAAYALPIIQKMLSTP---RGRVR-TLVIAPTRELACQISDSFRSLGQ 95
Query: 682 TSYVRNTCVFGGAPKREQARDLERGVE 762
+ +R ++GG +Q R L GV+
Sbjct: 96 RARIRECSIYGGVNMDQQIRRLRSGVD 122
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
FE NF V GV+ GYKEPTPIQAQ P M+G +++
Sbjct: 3 FESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVI 42
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 62.1 bits (144), Expect = 2e-08
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQ 648
++ + AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 236
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERG 756
QI + A F + S ++ ++GG R+Q L G
Sbjct: 237 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAG 273
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 341 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L++
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMS 181
>UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7;
n=9; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 671
Score = 62.1 bits (144), Expect = 2e-08
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Frame = +1
Query: 427 RCKDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRR--- 597
+ K NG++ +S + +G A+TG GKTLA++LP + + N P +
Sbjct: 110 KLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSKRKM 169
Query: 598 --GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
G P LVL PTRELA+Q+ +G + + + C++GG Q L+RGV+
Sbjct: 170 GYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGVD 226
>UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=4; Tetrapoda|Rep: Probable ATP-dependent RNA helicase
DDX59 - Rattus norvegicus (Rat)
Length = 589
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/78 (35%), Positives = 44/78 (56%)
Frame = +2
Query: 281 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 460
Y HP ++ ++E + ++V G EV PI FE FP+ + Q +K GY+ PT
Sbjct: 168 YKEHPFIVALRDDQIETLKQQLGISVQGQEVARPIIDFEHCGFPETLNQNLKKSGYEVPT 227
Query: 461 PIQAQGWPIAMSGKNLLA 514
PIQ Q P+ + G+++LA
Sbjct: 228 PIQMQMIPVGLLGRDILA 245
Score = 49.6 bits (113), Expect = 9e-05
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + A TGSGKT A++LP I+ + P AL+L PTRELA QI++ A +
Sbjct: 241 RDILASADTGSGKTAAFLLPVIIR-----ALPEDKTPSALILTPTRELAIQIERQAKELM 295
Query: 679 H-TSYVRNTCVFGGAPKREQARDLERGVE*SLLLQV 783
++ + GG P Q L++ V+ +L++
Sbjct: 296 RGLPRMKTVLLVGGLPLPPQLYRLQQHVKADTMLKM 331
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 62.1 bits (144), Expect = 2e-08
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +2
Query: 263 PFNKNF-YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
P N ++ Y HP +L ++E + + V G EV PI FE + P+ + +K
Sbjct: 161 PLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKK 220
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA 514
GY+ PTPIQ Q P+ + G+++LA
Sbjct: 221 SGYEVPTPIQMQMIPVGLLGRDILA 245
Score = 48.0 bits (109), Expect = 3e-04
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD-F 675
++ + A TGSGKT A++LP I+ + P AL+L PTRELA QI++ A +
Sbjct: 241 RDILASADTGSGKTAAFLLPVIMR-----ALFESKTPSALILTPTRELAIQIERQAKELM 295
Query: 676 GHTSYVRNTCVFGGAPKREQARDLERGVE 762
++ + GG P Q L++ V+
Sbjct: 296 SGLPRMKTVLLVGGLPLPPQLYRLQQHVK 324
>UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51;
Euteleostomi|Rep: Nucleolar RNA helicase 2 - Homo
sapiens (Human)
Length = 783
Score = 62.1 bits (144), Expect = 2e-08
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +1
Query: 490 YVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIR-RGDGPIALVLAPTRELAQQIQQVA 666
Y K+ I A+TG+GKT ++ +P I ++ + R RG P LVLAPTRELA Q+ +
Sbjct: 221 YSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVLAPTRELANQVSKDF 280
Query: 667 ADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+D T + C +GG P Q + G++
Sbjct: 281 SDI--TKKLSVACFYGGTPYGGQFERMRNGID 310
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 62.1 bits (144), Expect = 2e-08
Identities = 32/81 (39%), Positives = 51/81 (62%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A+TGSGKT+A+ +PA+ ++N + P LV++PTRELA Q +
Sbjct: 203 RDVVGIAETGSGKTVAFGIPALQYLNGLSDNK--SVPRVLVVSPTRELAIQTYENLNSLI 260
Query: 679 HTSYVRNTCVFGGAPKREQAR 741
+ ++ V+GGAPK EQAR
Sbjct: 261 QGTNLKAVVVYGGAPKSEQAR 281
Score = 41.9 bits (94), Expect = 0.018
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
PI F+E + +++G+K YKEPTPIQA WP ++G++++
Sbjct: 165 PILQFDELDVSAKLREGLKN--YKEPTPIQAATWPYLLAGRDVV 206
>UniRef50_Q0S0C7 Cluster: ATP-dependent RNA helicase; n=5;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Rhodococcus sp. (strain RHA1)
Length = 465
Score = 61.7 bits (143), Expect = 2e-08
Identities = 38/98 (38%), Positives = 55/98 (56%)
Frame = +1
Query: 469 SSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 648
++ + D ++ +G A TGSGKTLA+ LP +V + RRG P +VL PTRELA
Sbjct: 42 AATIPDVLAGRDVLGRAPTGSGKTLAFGLPMLVRLKGAAS-RRGF-PRGIVLVPTRELAL 99
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
QI++ + + +R V GG P + Q L RGV+
Sbjct: 100 QIERALDEPALSVGLRVANVVGGIPIKRQVEILSRGVD 137
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI-QQVAADF 675
++ +G AQTG+GKT A+ LP I NN R P LVLAPTRELA Q+ +Q A
Sbjct: 45 RDVLGQAQTGTGKTAAFALPLI---NNMDLASRDRAPQVLVLAPTRELAIQVAEQFEAFA 101
Query: 676 GHTSYVRNTCVFGGAPKREQARDLERGVE 762
+ + C++GG Q R L++GV+
Sbjct: 102 KNVPNLDVACIYGGQEYGSQIRALKQGVK 130
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + +QTG+GKTLA+ P I IN PP ++ + LVL PTRELA Q+++ ++
Sbjct: 39 KDLLAESQTGTGKTLAFSFPLIERINTLPPKKKKISILGLVLVPTRELALQVEKAFTNYA 98
Query: 679 HTSY--VRNTCVFGGAPKREQARDLERGVE 762
S ++ + GG Q R L G++
Sbjct: 99 EFSLRPIKTATLIGGENIDGQIRKLRMGLD 128
Score = 46.4 bits (105), Expect = 8e-04
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
FE+ NFPDY+ + V + + E T IQA+ P+ GK+LLA
Sbjct: 3 FEQLNFPDYLSRAVDNLNFSEATDIQAKAIPLIQEGKDLLA 43
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 61.7 bits (143), Expect = 2e-08
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 13/101 (12%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDG--------PIALVLAPTRE 639
K+ + +A+TGSGKT ++LPA+ I P ++ DG P +VLAPTRE
Sbjct: 124 KDVVAIAKTGSGKTCGFLLPALAKIVAEGTQKAPEMQLVDGRWRPGAVTPSVIVLAPTRE 183
Query: 640 LAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
LA QI A F + R+ ++GGA K +Q R L G +
Sbjct: 184 LAIQIHDECAKFCPAAGCRSAVLYGGAAKGDQLRALRSGAD 224
Score = 58.0 bits (134), Expect = 3e-07
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Frame = +2
Query: 287 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHN----PIQYFEEANFPDYVQQGVKTMGYKE 454
P PT LKR + E++R H++++ P F++A FP +++ +K GY
Sbjct: 51 PTPT-LKRVASK-EDFRKEHQISIKNACERTRDLEPYVTFDDAKFPAALRKALKAQGYDA 108
Query: 455 PTPIQAQGWPIAMSGKNLLA 514
PTPIQA+ WPI + GK+++A
Sbjct: 109 PTPIQAEAWPILLKGKDVVA 128
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 61.7 bits (143), Expect = 2e-08
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHI--NNQPP--IRRGDGPIALVLAPTRELAQQIQQVA 666
++ + AQTGSGKT A++LP + +I NN P P LV+ PTRELA QI + A
Sbjct: 299 RDIMACAQTGSGKTAAFLLPMLHYILDNNCPSNAFEEPAQPTGLVICPTRELAIQIMREA 358
Query: 667 ADFGHTSYVRNTCVFGGAPKREQARDLERG 756
F H+S + +GGA Q + + G
Sbjct: 359 RKFSHSSVAKCCVAYGGAAGFHQLKTIHSG 388
Score = 33.9 bits (74), Expect = 4.8
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 341 NHEVTVSGVEVHNPI-QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
N VSG E P + F+ N + + + GY PTP+Q P M+G++++A
Sbjct: 245 NVPANVSGAEPIQPAAESFQSMNLRPLLLENIVKAGYGCPTPVQKYTIPNVMNGRDIMA 303
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/85 (43%), Positives = 47/85 (55%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ IG A TGSGKTLA+ I I +G+G ALVL PTRELA+Q+Q +F
Sbjct: 40 KDIIGGAATGSGKTLAFGCGII------QKIEKGNGIRALVLTPTRELAEQVQNSLKEFS 93
Query: 679 HTSYVRNTCVFGGAPKREQARDLER 753
+R ++GG Q R LER
Sbjct: 94 RHKQLRVAPIYGGVAINPQIRQLER 118
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 61.3 bits (142), Expect = 3e-08
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHI--NNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 672
++ +G+AQTG+GKT A+ LP + + + +P RRG LVL+PTRELA QI + D
Sbjct: 103 RDLLGIAQTGTGKTAAFALPILHRLAEDKKPAPRRGFR--CLVLSPTRELATQIAESFRD 160
Query: 673 FGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+G + +FGG Q + L GV+
Sbjct: 161 YGKHMGLTVATIFGGVKYGPQMKALAAGVD 190
Score = 37.9 bits (84), Expect = 0.29
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 335 RNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
R +H + + + + F + + + + GY PTPIQAQ P+ MSG++LL
Sbjct: 48 RGSHAPSRAAARETHSLTQFTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLL 106
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 61.3 bits (142), Expect = 3e-08
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + AQTG+GKT + LP + ++ + G ALVL PTRELA Q+ + +G
Sbjct: 39 KDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETYG 97
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R+ VFGG P Q + L GV+
Sbjct: 98 KYLPLRSAVVFGGVPINPQIQKLRHGVD 125
Score = 36.3 bits (80), Expect = 0.90
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 419 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
+Q+ V GY P+PIQAQ P ++GK+++A
Sbjct: 12 IQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMA 43
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 61.3 bits (142), Expect = 3e-08
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + AQTG+GKT + LP + ++ + G ALVL PTRELA Q+ + +G
Sbjct: 39 KDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIR-ALVLTPTRELAAQVSESVETYG 97
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R+ VFGG P Q + L GV+
Sbjct: 98 KYLPLRSAVVFGGVPINPQIQKLRHGVD 125
Score = 36.3 bits (80), Expect = 0.90
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 419 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
+Q+ V GY P+PIQAQ P ++GK+++A
Sbjct: 12 IQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMA 43
>UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 416
Score = 61.3 bits (142), Expect = 3e-08
Identities = 36/84 (42%), Positives = 44/84 (52%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ G A+TGSGKT AY+LP H+ P ALV APTRELA QI V D G
Sbjct: 44 KDICGTAETGSGKTGAYMLPIFHHMWENP-----HSFFALVFAPTRELATQIDHVTRDIG 98
Query: 679 HTSYVRNTCVFGGAPKREQARDLE 750
VR + GG + Q + L+
Sbjct: 99 KDIKVRVCTIIGGVDEDSQVKALK 122
>UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetales|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 597
Score = 61.3 bits (142), Expect = 3e-08
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHIN-------NQPPI 591
K G ++ + + S ++ +GVA+TGSGKTLA++LP + +++ N +
Sbjct: 201 KSFGFRQPTPVQRASIPISLELRDVVGVAETGSGKTLAFLLPLLHYLSRVDGNYLNYEKV 260
Query: 592 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 732
R + P+ALVLAPTRELA QI Q A FG + GG +E
Sbjct: 261 R--NEPLALVLAPTRELALQITQEAEKFGKQLGFNVLSIIGGRQYQE 305
Score = 35.5 bits (78), Expect = 1.6
Identities = 11/60 (18%), Positives = 35/60 (58%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ ++ +T G ++ + + ++E+ + +K+ G+++PTP+Q PI++ ++++
Sbjct: 167 FNEDYGITTKGKKIPHATRSWDESGLDPKILASLKSFGFRQPTPVQRASIPISLELRDVV 226
>UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Candida glabrata|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 582
Score = 61.3 bits (142), Expect = 3e-08
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPP----IRRGDGPIALVLAPTRELAQQIQQ 660
++ +G+A TGSGKTLA+ +P + ++ P ++ DGP+ALVL PTRELAQQI Q
Sbjct: 214 RDILGIASTGSGKTLAFSIPILARLDALPARPVNLKTLDGPLALVLVPTRELAQQISQ 271
>UniRef50_P36120 Cluster: ATP-dependent RNA helicase DBP7; n=5;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP7 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 742
Score = 61.3 bits (142), Expect = 3e-08
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELAQQIQQVAADFG 678
+F AQTGSGKTL+Y+LP I I N + R G ALV+APTRELA QI V +
Sbjct: 186 DFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVIAPTRELASQIYHVCSTLV 245
Query: 679 HTSYVRNTC-VFGGAPKREQARDLERG 756
+ C + GG K+ + L +G
Sbjct: 246 SCCHYLVPCLLIGGERKKSEKARLRKG 272
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 61.3 bits (142), Expect = 3e-08
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A TGSGKTL ++LP I+ Q P R +GP L++ P+RELA+Q ++
Sbjct: 215 RDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQ 274
Query: 670 DFG-HTS-----YVRNTCVFGGAPKREQARDLERGV 759
+ H +R+ GG P E + RGV
Sbjct: 275 HYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGV 310
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/84 (34%), Positives = 42/84 (50%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
QP K + P + + S E E R+ + V G PI+ F E FP + G+
Sbjct: 136 QPI-KTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAA 194
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
G K PTPIQ QG P ++G++L+
Sbjct: 195 KGIKNPTPIQVQGLPTVLAGRDLI 218
>UniRef50_UPI0000F1E5FF Cluster: PREDICTED: similar to Pl10,
partial; n=1; Danio rerio|Rep: PREDICTED: similar to
Pl10, partial - Danio rerio
Length = 245
Score = 60.9 bits (141), Expect = 4e-08
Identities = 32/55 (58%), Positives = 37/55 (67%)
Frame = +1
Query: 592 RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 756
RR PI+LVLAPTRELA QI A F + S+VR V+GGA +Q RDLERG
Sbjct: 166 RRKQYPISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERG 220
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 60.9 bits (141), Expect = 4e-08
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHIN-NQPPIRRGDGPIALVLAPTRELAQQI-QQVAADF 675
+FIG+AQTG+GKT A+ LP + I+ N ++ AL+LAPTRELAQQI Q+
Sbjct: 53 DFIGLAQTGTGKTAAFGLPLLDLIDVNSREVQ------ALILAPTRELAQQICGQMEQMS 106
Query: 676 GHTSYVRNTCVFGGAPKREQARDLERGVE 762
H + VFGGA Q RD+ RG +
Sbjct: 107 KHLGKLNVVPVFGGANIMNQIRDIRRGAQ 135
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 60.9 bits (141), Expect = 4e-08
Identities = 32/87 (36%), Positives = 48/87 (55%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IGVAQTG+GKT AY LP ++ I +G P A++ PTREL QI+
Sbjct: 44 DIIGVAQTGTGKTAAYALPILMKIK----YAQGHNPRAVIFGPTRELVMQIEIAMKQLAK 99
Query: 682 TSYVRNTCVFGGAPKREQARDLERGVE 762
+ +R ++GG + Q L++GV+
Sbjct: 100 YTDLRIVALYGGIGPKLQKEHLQKGVD 126
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 60.9 bits (141), Expect = 4e-08
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +G+AQTGSGKT +++LP I+ + P+ + ALVL PTRELA Q+ QV F
Sbjct: 47 KDILGIAQTGSGKTASFVLP-ILQMLQTKPLGKNRHINALVLVPTRELAVQVGQVFQAFS 105
Query: 679 HT--SYVRNTCVFGGAPKREQARDLERGVE 762
+ + +++ V+GG Q L+ GVE
Sbjct: 106 NALPNKIKSLAVYGGVSINPQMIQLQ-GVE 134
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 60.9 bits (141), Expect = 4e-08
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHI--NNQPPIRRG-DGPIALVLAPTRELAQQIQQVAA 669
++ +G A+TG+GKTLA+ LP I + N + RG P +VLAPTRELA+Q++
Sbjct: 63 QDVVGRARTGTGKTLAFSLPVIEKLLSNGRGSGGRGYRNPKCIVLAPTRELAKQVENEI- 121
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
F + CV+GG P +Q L RGV+
Sbjct: 122 -FITAPTLDTACVYGGTPIGQQESKLRRGVD 151
>UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 744
Score = 60.9 bits (141), Expect = 4e-08
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQ---PPIRRGDGPIALVLAPTRELAQQIQQVAA 669
K+ IG +TGSGKTL + LP I + N+ I++ P LV+ PTREL Q+
Sbjct: 106 KDLIGKDRTGSGKTLGFSLPLIEKLRNEGNFTSIKKKQTPYMLVVVPTRELCIQVANEIN 165
Query: 670 DFGHT-SYVRNTCVFGGAPKREQARDLERGVE 762
HT + R ++GG REQA + GVE
Sbjct: 166 TLKHTDNEFRVLQIYGGVDVREQANQIRDGVE 197
>UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 491
Score = 60.9 bits (141), Expect = 4e-08
Identities = 33/86 (38%), Positives = 51/86 (59%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ + A+TGSGKTLA+++PAI + + ++ DG I L++APTRELA QI VA
Sbjct: 66 DILAAAKTGSGKTLAFLIPAIDLLFRKNATKK-DGTIVLIVAPTRELADQIFDVATLLLK 124
Query: 682 TSYVRNTCVFGGAPKREQARDLERGV 759
+ V +GG K+ + L+ G+
Sbjct: 125 DTEVSFGAAYGGKEKKNETTLLKSGI 150
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 60.9 bits (141), Expect = 4e-08
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 17/101 (16%)
Frame = +1
Query: 508 IGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI-----QQVAAD 672
+ +AQTGSGKTLAY+LPA+VH+ I P L+L PTREL QI Q +
Sbjct: 100 LAIAQTGSGKTLAYLLPALVHLEQHAMIMESPQPKLLILVPTRELGVQIYDQLLQLIEFY 159
Query: 673 FGHTSY-----------VRNTCVFGGAP-KREQARDLERGV 759
+G+ ++ C++GG P K++Q +++G+
Sbjct: 160 YGNKKQNEKENSPNLTNLKIVCIYGGNPNKKQQVELIQKGI 200
Score = 34.3 bits (75), Expect = 3.6
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTV--SGVEVHNPIQYFEE-ANFPDYVQQGVK 436
F K F D + L+ S ++E++R ++ +T+ G + ++ IQ F + +FP +
Sbjct: 24 FTKCFIDA--SNLQYSQEDIEKFRTDNNITIVRDGEQDNDIIQPFLDWKHFP------LG 75
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLLA 514
+++PT IQ++ PI +SG+N LA
Sbjct: 76 PPEFQQPTAIQSEVIPIVLSGRNALA 101
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 60.5 bits (140), Expect = 5e-08
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A TGSGKTL ++LP I+ Q P R +GP L++ P+RELA+Q +
Sbjct: 217 RDIIGIAFTGSGKTLVFVLPLIMFCLEQEVALPFGRNEGPYGLIICPSRELAKQTYDIIQ 276
Query: 670 DF------GHTSYVRNTCVFGGAPKREQARDLERGV 759
+ H +R GG P E + RGV
Sbjct: 277 HYTNSLRHHHCPEIRCCLAIGGVPVSESLDVISRGV 312
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/80 (32%), Positives = 43/80 (53%)
Frame = +2
Query: 272 KNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYK 451
K + P T+L + E R +TV G +V P++ F+E F + G++ G
Sbjct: 141 KTSWRPPRTILTKDNVRHERIRRKFGITVEGEDVPPPLRSFKEMKFHKGILLGLEQKGIT 200
Query: 452 EPTPIQAQGWPIAMSGKNLL 511
+PTPIQ QG P +SG++++
Sbjct: 201 KPTPIQVQGIPAVLSGRDII 220
>UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:
RNA helicase II/Gu - Xenopus laevis (African clawed
frog)
Length = 800
Score = 60.5 bits (140), Expect = 5e-08
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +1
Query: 490 YVWKEFIGVAQTGSGKTLAYILPAIVHIN-NQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
Y K+ + A+TG+GKT ++ +P + ++ +Q P+ RG P ++L PTRELA QI
Sbjct: 256 YSGKDVVVQARTGTGKTFSFGIPLVERLSEDQQPLARGRAPRVIILTPTRELAIQITNEL 315
Query: 667 ADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
T ++ C +GG P ++Q ++ G++
Sbjct: 316 RSM--TKKLKVACFYGGTPYQQQVFAIKDGID 345
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 60.5 bits (140), Expect = 5e-08
Identities = 32/95 (33%), Positives = 52/95 (54%)
Frame = +1
Query: 478 LADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQ 657
+ D+ ++ +G A TGSGKTLA+ +P + ++ P R + P AL+L+PTRELA QI
Sbjct: 260 IPDAIAGRDVLGRASTGSGKTLAFGVPLLSRLSATP--REDNRPRALILSPTRELAMQIA 317
Query: 658 QVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+ + + + GG Q + +RGV+
Sbjct: 318 DALSSLASSMGLSTILIAGGMSYGPQTKAFKRGVD 352
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 60.5 bits (140), Expect = 5e-08
Identities = 34/107 (31%), Positives = 57/107 (53%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G + ++ + + ++ I VAQTG+GKT +++LP I + + R P +L+
Sbjct: 20 GYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMIDILAHGRC--RARMPRSLI 77
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
L PTRELA Q+ + +G + + + GG P EQ LE+GV+
Sbjct: 78 LEPTRELAAQVAENFEKYGKYHKLSMSLLIGGVPMAEQQAALEKGVD 124
Score = 33.1 bits (72), Expect = 8.4
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F + + Q V +GY+EPTP+QA P + ++L+A
Sbjct: 3 FADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIA 43
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 60.5 bits (140), Expect = 5e-08
Identities = 31/88 (35%), Positives = 47/88 (53%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + +QTGSGKT A++LP + + P GP AL+L PTRELA Q V G
Sbjct: 58 KDVLVGSQTGSGKTAAFVLPMLQKLTEAGP---APGPRALILEPTRELAAQTAAVCRQLG 114
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
++ + GG + +Q + + GV+
Sbjct: 115 RRLSLKTRVICGGTSREQQVQSVSDGVD 142
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 60.5 bits (140), Expect = 5e-08
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + AQTG+GKT A+ILP I + + +R +LVL PTRELA Q++ A +
Sbjct: 62 KDIMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVH-SLVLTPTRELAAQVEASAKAYT 120
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R+ VFGG R Q + L+ GV+
Sbjct: 121 KYLALRSDAVFGGVSIRPQVKRLQGGVD 148
Score = 33.5 bits (73), Expect = 6.3
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 341 NHEVTVSGVEV-HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
+H +S ++ +N FE+ + +K GY PTPIQA P + GK+++A
Sbjct: 8 DHSPIISNLKNDNNNTLTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMA 66
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 60.5 bits (140), Expect = 5e-08
Identities = 35/85 (41%), Positives = 45/85 (52%)
Frame = +1
Query: 508 IGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 687
+G A TG+GKT AY+LP + I +RG L++ PTRELA Q+ A G
Sbjct: 43 VGQAPTGTGKTAAYLLPVLQRI------QRGKKAQVLIVTPTRELALQVADEVAKLGKYL 96
Query: 688 YVRNTCVFGGAPKREQARDLERGVE 762
VR V+GG Q R L +GVE
Sbjct: 97 KVRALAVYGGQAIERQIRGLRQGVE 121
>UniRef50_Q86B47 Cluster: CG8611-PB, isoform B; n=2; Drosophila
melanogaster|Rep: CG8611-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 975
Score = 60.5 bits (140), Expect = 5e-08
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELAQQIQQVAADF 675
K+ + +QTGSGKTLAY LP + + Q P I+R DG +ALV+ PTREL Q ++
Sbjct: 366 KDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKL 425
Query: 676 --GHTSYVRNTCVFGGAPKREQARDLERGV 759
+T V + + G + K E+AR L +G+
Sbjct: 426 VKPYTWIVPGSLLGGESRKSEKAR-LRKGI 454
>UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5;
Trypanosoma|Rep: Mitochondrial DEAD box protein -
Trypanosoma brucei
Length = 546
Score = 60.5 bits (140), Expect = 5e-08
Identities = 36/87 (41%), Positives = 48/87 (55%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ IG+A TGSGKT+A+ +PA+ P P +VLAPTREL QQ +V
Sbjct: 157 DMIGLAPTGSGKTVAFAVPALKKFQWSP----NGSPRIVVLAPTRELVQQTAKVFHQLS- 211
Query: 682 TSYVRNTCVFGGAPKREQARDLERGVE 762
+ VR +GGAP+ QAR L G +
Sbjct: 212 SGKVRVCEAYGGAPREAQARRLHNGCD 238
Score = 35.9 bits (79), Expect = 1.2
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 377 NPIQYFEEA-NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
NP++ F + N PD++ +G+++ G+ TPIQ+ P+ G +++
Sbjct: 114 NPVKLFSDLDNLPDWLSKGLQSSGFSCTTPIQSYTIPVLDEGHDMI 159
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 60.5 bits (140), Expect = 5e-08
Identities = 32/86 (37%), Positives = 47/86 (54%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + AQTGSGKT A++LP + + P P ++++PTRELA QI A F
Sbjct: 283 RDLMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFA 342
Query: 679 HTSYVRNTCVFGGAPKREQARDLERG 756
SY++ V+GG R Q + RG
Sbjct: 343 FESYLKIGIVYGGTSFRHQNECITRG 368
Score = 54.0 bits (124), Expect = 4e-06
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = +2
Query: 338 NNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
NN V V+G +V PIQ+F A+ D + V GYK PTPIQ P+ SG++L+A
Sbjct: 229 NNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMA 287
>UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70;
Eukaryota|Rep: ATP-dependent RNA helicase HAS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 505
Score = 60.5 bits (140), Expect = 5e-08
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAI--VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 672
++ +G A+TGSGKTLA+++PAI +H P R G G +V+ PTRELA QI VA +
Sbjct: 80 RDVLGAAKTGSGKTLAFLIPAIELLHSLKFKP-RNGTG--IIVITPTRELALQIFGVARE 136
Query: 673 FGHTSYVRNTCVFGGAPKREQARDLERGV 759
V GGA +R++A L +GV
Sbjct: 137 LMEFHSQTFGIVIGGANRRQEAEKLMKGV 165
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 60.5 bits (140), Expect = 5e-08
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIR-----RGDGPIALVLAPTRELAQQIQQV 663
++ IG+A+TGSGKT+A+ LP + + ++P + R P A++++PTRELA Q
Sbjct: 217 RDVIGIAETGSGKTMAFSLPCVESLASRPKPKFNSRDRTAHPRAVIVSPTRELAMQTHAA 276
Query: 664 AADFGHTSYVRNTCVFGGAPKREQ 735
+ + C+FGG+ K EQ
Sbjct: 277 LSGLASLVGLSAVCIFGGSDKNEQ 300
Score = 36.3 bits (80), Expect = 0.90
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 320 EVEEYRNNHEVTVSGVEVHN--PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 493
E+E + E+ + N PI F + + + + Y PTPIQ+ WP ++
Sbjct: 156 EIETFLKEKEIVIKDPSSSNLRPIMNFSQLPQSNLISKN-PFAAYTNPTPIQSASWPFSL 214
Query: 494 SGKNLL 511
SG++++
Sbjct: 215 SGRDVI 220
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 60.1 bits (139), Expect = 6e-08
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +G AQTG+GKT A+ LPA+ I+ I++ P +VLAPTRELA Q+ + FG
Sbjct: 53 KDVLGEAQTGTGKTAAFGLPALAKIDTS--IKK---PQLMVLAPTRELAMQVAEAIESFG 107
Query: 679 -HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R ++GG Q + LERG +
Sbjct: 108 KDMKGLRVATLYGGQSYGPQFQQLERGAQ 136
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 60.1 bits (139), Expect = 6e-08
Identities = 30/87 (34%), Positives = 47/87 (54%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ +G+AQTG+GKT A+ LP I + +L+L PTRELA QI Q D+
Sbjct: 41 DLLGIAQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSD 100
Query: 682 TSYVRNTCVFGGAPKREQARDLERGVE 762
++ V+GG ++ Q +E G++
Sbjct: 101 GLGLKTKVVYGGVGRQAQVDSIELGLD 127
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 60.1 bits (139), Expect = 6e-08
Identities = 34/85 (40%), Positives = 48/85 (56%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+AQTG+GKT ++LP + I R G ALVL+PTRELA QI Q A D+
Sbjct: 39 RDLLGIAQTGTGKTGGFLLPVLHKIAEGR--RHGIRNRALVLSPTRELATQIHQAAKDYA 96
Query: 679 HTSYVRNTCVFGGAPKREQARDLER 753
+ + GG Q R+L+R
Sbjct: 97 KYLHTNAVLLVGGVDFIRQERNLKR 121
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 60.1 bits (139), Expect = 6e-08
Identities = 35/90 (38%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVH-INN---QPPIRRGDGPIALVLAPTRELAQQIQQVA 666
++ + AQTGSGKT A++LP + I N P A+V+ PTREL QI A
Sbjct: 351 RDLMACAQTGSGKTAAFLLPVLTKLITNGLQSSQFSEKQTPRAIVVGPTRELIYQIFLEA 410
Query: 667 ADFGHTSYVRNTCVFGGAPKREQARDLERG 756
F + VR +GG Q RDL+RG
Sbjct: 411 RKFSRGTVVRPVVAYGGTSMNHQIRDLQRG 440
Score = 43.6 bits (98), Expect = 0.006
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
V VSGV I FE A P+ V VK Y+ PTP+Q PI + ++L+A
Sbjct: 301 VEVSGVNAPKSIPTFEVAGLPETVLANVKRANYERPTPVQKYSIPIINADRDLMA 355
>UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia ATCC
50803|Rep: GLP_397_1016_18 - Giardia lamblia ATCC 50803
Length = 332
Score = 60.1 bits (139), Expect = 6e-08
Identities = 33/84 (39%), Positives = 49/84 (58%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++F G+A+TGSGKTL + LP + ++ P G ALVL PTRELA QI+Q +G
Sbjct: 99 RDFCGIARTGSGKTLCFALPILQELSQDPY-----GIFALVLTPTRELALQIEQQMNAYG 153
Query: 679 HTSYVRNTCVFGGAPKREQARDLE 750
+ ++ + GG EQ+ L+
Sbjct: 154 NPLGIQAQSLIGGKDSVEQSAILD 177
>UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putative;
n=2; Theileria|Rep: DEAD-box family (RNA) helicase,
putative - Theileria annulata
Length = 797
Score = 60.1 bits (139), Expect = 6e-08
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVH-INNQPPIRRGDGP---------IALVLAPTRELAQ 648
++ + AQTGSGKT A++LP + + PP + GP + LVL+PTRELA
Sbjct: 284 RDLMACAQTGSGKTAAFLLPIVTSMLRTGPPKQPSLGPLYNSRVALPVCLVLSPTRELAV 343
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
Q + F + +R ++GG+ R Q +LERG +
Sbjct: 344 QTYTESRKFNFGTGIRTVVLYGGSEVRRQLIELERGCD 381
>UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 596
Score = 60.1 bits (139), Expect = 6e-08
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Frame = +1
Query: 517 AQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF-G 678
A TGSGKTLAY+LP + + + PIRR G +A+V+APTREL QI+ V D
Sbjct: 77 ADTGSGKTLAYLLPIMHRLATDFPRDTNPIRRDMGCLAIVIAPTRELCLQIETVVQDLRS 136
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGV 759
++V + + GG + + + L +G+
Sbjct: 137 QMNFVISGSLLGGEKVQSEKKRLRKGI 163
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 59.7 bits (138), Expect = 8e-08
Identities = 34/83 (40%), Positives = 43/83 (51%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +A TGSGKTLAY LP + + P + ALVL PTRELA Q+ +V G
Sbjct: 60 KDVFALANTGSGKTLAYGLPLLERLKTSPEQQ------ALVLVPTRELAMQVSEVLTHVG 113
Query: 679 HTSYVRNTCVFGGAPKREQARDL 747
+ C+ GG K EQ L
Sbjct: 114 TALGLNTLCLCGGVDKTEQQNAL 136
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 59.7 bits (138), Expect = 8e-08
Identities = 37/110 (33%), Positives = 53/110 (48%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 612
KD G + + + + + IG AQTG+GKT A+ INN + P
Sbjct: 20 KDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAF---GCAIINNADFSGKKKSPK 76
Query: 613 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
AL+LAPTRELA Q+ + G + ++GG P Q R L+ GV+
Sbjct: 77 ALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIRALKNGVD 126
Score = 36.3 bits (80), Expect = 0.90
Identities = 12/40 (30%), Positives = 27/40 (67%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F++ + + + +K MG++EP+ IQA+ P+A+ G +++
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDII 45
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 59.7 bits (138), Expect = 8e-08
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-PIALVLAPTRELAQQIQQVAADF 675
++ + AQTG+GKT AY LP I ++ Q P AL+LAPTRELAQQ+ +
Sbjct: 41 RDVLAAAQTGTGKTAAYGLPLIQMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQY 100
Query: 676 GHTSYVRNTCVFGGAPKREQARDLERGVE 762
+ + V+GG R Q L +GV+
Sbjct: 101 AQHTELAIVTVYGGTSIRVQQEQLAKGVD 129
>UniRef50_Q6MN90 Cluster: RNA helicase; n=1; Bdellovibrio
bacteriovorus|Rep: RNA helicase - Bdellovibrio
bacteriovorus
Length = 460
Score = 59.7 bits (138), Expect = 8e-08
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Frame = +1
Query: 508 IGVAQTGSGKTLAYILPAIVHINNQP----PIRRGDGPIALVLAPTRELAQQIQQVAADF 675
+GV++TGSGKTLAY+LP + ++ + P++ + P A+V+ P+REL +Q+ +V
Sbjct: 95 VGVSETGSGKTLAYVLPILNYLKSLEESGDPVKEENAPRAVVMVPSRELGEQVAKVFKSM 154
Query: 676 GHTSYVRNTCVFGGAPKREQAR 741
H + +R GG EQAR
Sbjct: 155 THDTRLRVRPALGGM-SLEQAR 175
>UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2;
Idiomarina|Rep: ATP-dependent RNA helicase - Idiomarina
loihiensis
Length = 409
Score = 59.7 bits (138), Expect = 8e-08
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = +1
Query: 517 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 696
A TG+GKTLA++LPA+ H+ + P + G I LVLAPTRELA+QI + A F + +
Sbjct: 47 APTGTGKTLAFLLPALQHLLDFPRQQPGPARI-LVLAPTRELAEQIHEQAKQFEAKTGLT 105
Query: 697 NTCVFGGAPKREQARDLER 753
+ V GG Q LE+
Sbjct: 106 SVVVTGGINYGSQLSVLEK 124
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 59.7 bits (138), Expect = 8e-08
Identities = 30/88 (34%), Positives = 49/88 (55%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + +AQTG+GKT A+++P + + N D LV+APTRELA QI +V G
Sbjct: 39 EDVLAIAQTGTGKTAAFVIPVLNTLINVKKSEHTDIS-CLVMAPTRELAVQISEVFKKIG 97
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ +R C+ GG + Q + G++
Sbjct: 98 AYTRLRTVCITGGVEQEAQIAAADYGID 125
>UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=11; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 678
Score = 59.7 bits (138), Expect = 8e-08
Identities = 35/109 (32%), Positives = 56/109 (51%)
Frame = +1
Query: 436 DNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 615
D G ++ + + ++ +G+AQTG+GKT A+ LP I + N R P A
Sbjct: 19 DTGYTTATPIQAAAIPVALAGQDVLGIAQTGTGKTAAFTLPLIDKLMNGRAKARM--PRA 76
Query: 616 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
LV+APTRELA Q+ + + + + GG +Q + L+RGV+
Sbjct: 77 LVIAPTRELADQVASSFEKYAKGTKLSWALLIGGVSFGDQEKKLDRGVD 125
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 59.7 bits (138), Expect = 8e-08
Identities = 34/110 (30%), Positives = 56/110 (50%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 612
+D G A + + ++ + AQTG+GKT + LP ++ I ++ + +
Sbjct: 21 EDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLP-LLEILSKGENAQSNQVR 79
Query: 613 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
ALVL PTRELA Q+ + ++G +++T VFGG Q L RG +
Sbjct: 80 ALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKINPQMMALRRGAD 129
>UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3;
Eutheria|Rep: Nucleolar protein GU2 variant - Homo
sapiens (Human)
Length = 363
Score = 59.7 bits (138), Expect = 8e-08
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = +1
Query: 490 YVWKEFIGVAQTGSGKTLAYILPAIVHIN-NQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
Y K+ I A+TG+GKT ++ +P I + NQ I++ P LVLAPT ELA Q+ +
Sbjct: 172 YEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTGELANQVAKDF 231
Query: 667 ADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
D T + C +GG + Q + G++
Sbjct: 232 KDI--TRKLSVACFYGGTSYQSQINHIRNGID 261
>UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;
n=2; Euteleostomi|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 645
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +1
Query: 490 YVWKEFIGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
Y K+ IG A+TG+GKT ++ +P + + + RRG P LVLAPTRELA Q+ +
Sbjct: 189 YDGKDLIGQARTGTGKTFSFAVPLVEKLQSGDQERRRGRPPKVLVLAPTRELAIQVTKDF 248
Query: 667 ADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
D T + TC +GG+ Q + G++
Sbjct: 249 KDI--TRKLSVTCFYGGSSYNPQIDAIRSGID 278
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI-ALVLAPTRELAQQIQQVAADF 675
++ +G+AQTG+GKT AY LP + + PP G + AL+L+PTR+LA QI F
Sbjct: 51 RDVVGLAQTGTGKTAAYALPLLQQLTEGPP-----GQLRALILSPTRDLADQICVAMNHF 105
Query: 676 GHTSYVRNTCVFGG 717
G +++R ++GG
Sbjct: 106 GRQTHLRCATIYGG 119
Score = 36.7 bits (81), Expect = 0.68
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F E NF + G++T GY+ TPIQ + P + G++++
Sbjct: 15 FTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVV 54
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/108 (31%), Positives = 54/108 (50%)
Frame = +1
Query: 439 NGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 618
NG+ ++ + D+ K+ +G +TGSGKTL++ LP + + + P A+
Sbjct: 79 NGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTLATLAGGRTEKHK--PRAV 136
Query: 619 VLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+L PTRELA Q+ +G ++ V GG Q LERGV+
Sbjct: 137 ILTPTRELAMQVADALQPYGDVLGLKMKVVCGGTSMGNQIYALERGVD 184
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG--PI-ALVLAPTRELAQQIQQVAA 669
++ +G AQTG+GKT ++ LP I + Q P+ AL+L PTRELA Q+
Sbjct: 49 RDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVH 108
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+ + +R+ VFGG Q +L RGVE
Sbjct: 109 AYAKHTPLRSAVVFGGVDMNPQMAELRRGVE 139
Score = 34.3 bits (75), Expect = 3.6
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F++ + + + GY PTPIQA+ P+ +SG++++
Sbjct: 13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVM 52
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/87 (32%), Positives = 50/87 (57%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ +G AQTG+GKT A+ +P + +N + +L++ PTRELA QI + +G
Sbjct: 121 DLLGCAQTGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYGR 180
Query: 682 TSYVRNTCVFGGAPKREQARDLERGVE 762
+ + +T +FGG + Q L++G++
Sbjct: 181 HTGLTSTVIFGGVNQNPQTASLQKGID 207
Score = 36.3 bits (80), Expect = 0.90
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 374 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
H F + + Q ++ GY+ PTPIQA+ P+ + G +LL
Sbjct: 78 HTDTMQFRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLL 123
>UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=6;
Trypanosomatidae|Rep: Nucleolar RNA helicase II,
putative - Leishmania major
Length = 674
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 517 AQTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 693
A+TGSGKTLA+ +P + + P + RG GP A++ PTRELA Q+Q V G + +
Sbjct: 130 ARTGSGKTLAFGIPIVERLLKLPSHLTRGRGPAAVIFCPTRELAIQVQDVLC--GISCGL 187
Query: 694 RNTCVFGGAPKREQARDLERGVE 762
T ++GG Q R L GV+
Sbjct: 188 VVTALYGGVAYANQERVLRSGVD 210
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 59.3 bits (137), Expect = 1e-07
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIR--------RGDGPIALVLAPTRELAQQI 654
++ I VA+TGSGKTLA++LP + HI ++ + P+ +++ PTREL QI
Sbjct: 416 RDVISVAKTGSGKTLAFLLPMLRHIKHRVGVETHTTTLSGASSHPLGVIITPTRELCVQI 475
Query: 655 QQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 756
+ F + C +GG+P ++Q L++G
Sbjct: 476 YRDLRPFLAALELTAVCAYGGSPIKDQIAALKKG 509
Score = 39.1 bits (87), Expect = 0.13
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
+ F + FY + + E E R + + + + G + PI + + P +
Sbjct: 335 EDFRRQFYVESSELADMTEAETNELRLSLDGIKIRGKDCPKPISKWTQLGLPGPTMGVLN 394
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLLA 514
+ Y +PT IQAQ P MSG+++++
Sbjct: 395 DLRYDKPTSIQAQAIPAVMSGRDVIS 420
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 59.3 bits (137), Expect = 1e-07
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+AQTGSGKT A+ LP + +++ P ++ P LVLAPTRELA Q+ + DF
Sbjct: 44 RDVLGMAQTGSGKTAAFSLPLLQNLD--PELK---APQILVLAPTRELAVQVAEAMTDFS 98
Query: 679 -HTSYVRNTCVFGGAPKREQARDLERG 756
H V ++GG Q R L +G
Sbjct: 99 KHMRGVNVVALYGGQRYDVQLRALRQG 125
>UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_03001730;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001730 - Ferroplasma acidarmanus fer1
Length = 430
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ I ++TGSGKT AY+LP + N +G A+++ PTRELA Q +VA+ G
Sbjct: 34 KDVIIRSKTGSGKTAAYLLPVL----NSVEKLKGKSVKAIIILPTRELALQTHRVASRLG 89
Query: 679 HTSYVRNTCVFGGAPKREQARDL 747
S +++T V+GGA Q +L
Sbjct: 90 KISGIKSTIVYGGASIIRQVEEL 112
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/88 (35%), Positives = 47/88 (53%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+AQTG+GKT A++LP+I + LVLAPTREL QI A D+G
Sbjct: 40 RDLLGIAQTGTGKTAAFMLPSIDRLREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYG 99
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ ++ + GG + L RG +
Sbjct: 100 ALAGLKVQSIVGGTSVNKDRNKLHRGTD 127
Score = 33.1 bits (72), Expect = 8.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F + V Q + GY PTPIQ Q P + G++LL
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLL 43
>UniRef50_A7PDS5 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 563
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = +1
Query: 517 AQTGSGKTLAYILPAIVHINNQPP-IRRGDGPIALVLAPTRELAQQIQQVAADFGHT-SY 690
A TG+GKT+AY+ P I H++ P I R G ALVL PTREL Q+ ++ H +
Sbjct: 75 AATGTGKTIAYLAPVINHLHKYDPRIERSAGTFALVLVPTRELCMQVYEILQKLLHRFHW 134
Query: 691 VRNTCVFGGAPKREQARDLERGV 759
+ V GG + ++ L +G+
Sbjct: 135 IVPGYVMGGENRSKEKARLRKGI 157
>UniRef50_A4S507 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 560
Score = 58.8 bits (136), Expect = 1e-07
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +1
Query: 517 AQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT-SY 690
A+TGSGKTL+YI P I P + R +G LVL PTRELA Q++ A G +
Sbjct: 45 AETGSGKTLSYIAPLYSKIGGITPRVTREEGTRGLVLVPTRELATQVEDTARRVGRPFHW 104
Query: 691 VRNTCVFGGAPKREQARDLERGVE*SLLL 777
V + + GG + ++ L +GV SLL+
Sbjct: 105 VVTSSIMGGENRAKEKARLRKGV--SLLI 131
>UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11;
Plasmodium|Rep: DEAD-box helicase 11 - Plasmodium
falciparum
Length = 941
Score = 58.8 bits (136), Expect = 1e-07
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 16/103 (15%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVH-INNQPP---------------IRRGDGPIALVLAPT 633
+ IGVAQTGSGKT Y+LP I H + N PP R PI L+LAPT
Sbjct: 401 DLIGVAQTGSGKTAGYLLPIINHMLINDPPKHTYYEQNNKTSNYYFNRVCLPICLILAPT 460
Query: 634 RELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
RELA QI A F + ++ ++GG + Q +L++G +
Sbjct: 461 RELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGAD 503
>UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 536
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Frame = +1
Query: 484 DSYVWKEFIGVAQTGSGKTLAYILPAIVHI----NNQPPIRRGDGPIALVLAPTRELAQQ 651
DSY + IG++Q G+GKTLAY++P + +I N P P+++VL PT ELA Q
Sbjct: 176 DSY---DIIGLSQPGTGKTLAYVIPLLYYILEYKKNHPETNNFSIPLSVVLVPTHELAVQ 232
Query: 652 IQQVAADFGHTSYVRNTCVFGGAPKREQARDL 747
+Q+V G +++ + G +QA +L
Sbjct: 233 VQEVIDKLGINLGIKSRTLTGSFRLNDQALEL 264
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,721,476
Number of Sequences: 1657284
Number of extensions: 16083920
Number of successful extensions: 45810
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 42061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44927
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68731504465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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