Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120198.Seq
(801 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 124 6e-29
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 97 1e-20
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 94 1e-19
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 93 2e-19
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 91 9e-19
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 91 1e-18
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 90 2e-18
08_01_0397 - 3509186-3510291,3510322-3512335 87 2e-17
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 79 3e-15
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 79 3e-15
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 78 9e-15
03_05_0865 - 28365430-28367640 76 3e-14
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 75 7e-14
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 73 3e-13
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 68 8e-12
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 65 7e-11
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 64 9e-11
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 61 9e-10
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 60 3e-09
06_03_1255 + 28780181-28781172,28782065-28782932 58 6e-09
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 56 3e-08
02_01_0381 - 2764331-2764342,2768966-2769907 56 3e-08
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 55 6e-08
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 52 7e-07
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 51 9e-07
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 51 1e-06
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 50 2e-06
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 50 3e-06
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 49 5e-06
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 49 5e-06
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 49 5e-06
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 48 7e-06
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 47 2e-05
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 46 3e-05
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 46 4e-05
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 44 1e-04
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 44 2e-04
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 43 2e-04
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 42 6e-04
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 42 8e-04
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 41 0.001
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 41 0.001
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 41 0.001
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 41 0.001
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 41 0.001
03_02_0189 - 6253659-6255380 41 0.001
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 40 0.002
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 40 0.002
03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 40 0.003
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 38 0.009
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 37 0.016
09_03_0167 + 12965030-12965356,12966100-12966387,12966704-129668... 36 0.028
10_08_0429 + 17845303-17845431,17845508-17845684,17845782-178458... 33 0.20
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 33 0.20
01_05_0296 + 20567259-20567386,20568895-20569123,20569205-205694... 31 0.81
01_05_0295 + 20537147-20537291,20539111-20539283,20539365-205395... 31 0.81
01_07_0205 - 41978437-41980599,41980805-41981215 31 1.1
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677... 31 1.4
02_01_0091 + 646299-649082 30 1.9
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287... 29 3.3
07_01_1218 - 11633829-11634628,11634713-11635050,11635349-116354... 28 9.9
06_03_0547 + 22001831-22002304 28 9.9
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 9.9
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 124 bits (300), Expect = 6e-29
Identities = 55/88 (62%), Positives = 69/88 (78%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+AQTGSGKTL+Y+LP +VH+ QP + +GDGPI L+LAPTRELA QIQQ + FG
Sbjct: 194 RDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGKFG 253
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
S R+TC++GGAPK Q RDL RGVE
Sbjct: 254 SYSRTRSTCIYGGAPKGPQIRDLRRGVE 281
Score = 106 bits (254), Expect = 2e-23
Identities = 44/92 (47%), Positives = 62/92 (67%)
Frame = +2
Query: 236 PRLGFCSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 415
P+ F SL PF KNFY P V S +V +YR ++TV G +V P++YF+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 416 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
Y Q + G+ EPTPIQ+QGWP+A+ G++++
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMALKGRDMI 197
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +3
Query: 744 LGEGSRIVIATPGRLIDFL 800
L G IVIATPGRLID L
Sbjct: 276 LRRGVEIVIATPGRLIDML 294
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 97.1 bits (231), Expect = 1e-20
Identities = 46/88 (52%), Positives = 61/88 (69%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + +A+TGSGKTL Y+LP +HI R GP LVLAPTRELA QI + A FG
Sbjct: 188 QDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRS-GPTVLVLAPTRELATQILEEAVKFG 246
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+S + +TC++GGAPK Q RDL+RGV+
Sbjct: 247 RSSRISSTCLYGGAPKGPQLRDLDRGVD 274
Score = 65.3 bits (152), Expect = 5e-11
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = +2
Query: 326 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
E YR+ HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+ ++
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 506 LLA 514
++A
Sbjct: 190 VVA 192
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 93.9 bits (223), Expect = 1e-19
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ + VA+TGSGKTL Y++P + + R DGP LVL+PTRELA QIQ A FG
Sbjct: 218 RDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLSPTRELATQIQDEAKKFG 276
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+S + + C++GGAPK Q RDLERG +
Sbjct: 277 RSSRISSVCLYGGAPKGPQLRDLERGAD 304
Score = 63.7 bits (148), Expect = 2e-10
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +2
Query: 326 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 505
E YR HE+T+ G E P F+ FP + + V+ G+ PTPIQAQ WPIA+ ++
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
Query: 506 LLA 514
++A
Sbjct: 220 IVA 222
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 93.5 bits (222), Expect = 2e-19
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLAY+LPAIVH+N QP + GDGPI LVLAPTRELA QIQQ A FG
Sbjct: 129 RDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFG 188
Score = 91.1 bits (216), Expect = 9e-19
Identities = 39/85 (45%), Positives = 55/85 (64%)
Frame = +2
Query: 257 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 436
L F KNFY P+V + EVE YR E+TV G +V P++ F + FP+YV Q +
Sbjct: 48 LPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEIT 107
Query: 437 TMGYKEPTPIQAQGWPIAMSGKNLL 511
G+ EPTPIQ+QGWP+A+ G++L+
Sbjct: 108 KAGFVEPTPIQSQGWPMALRGRDLI 132
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 753 GSRIVIATPGRLIDFL 800
G IVIATPGRLID +
Sbjct: 188 GVEIVIATPGRLIDMI 203
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 91.1 bits (216), Expect = 9e-19
Identities = 45/91 (49%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHIN---NQPPIRRGDGPIALVLAPTRELAQQIQQVAA 669
++ + +A+TGSGKTL Y++PA +H+ N P + GP LVLAPTRELA QIQ A
Sbjct: 642 RDIVAIAKTGSGKTLGYLIPAFIHLRRYQNNPML----GPTVLVLAPTRELASQIQDEAV 697
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
FG +S V TC++GG K Q R+LERG +
Sbjct: 698 KFGRSSRVSCTCLYGGTSKGLQLRELERGAD 728
Score = 64.1 bits (149), Expect = 1e-10
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 SLQPFNKNFYDPH-PTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 430
S++P ++ F P+ P++ + YR +HEVT G V P FE FP + Q
Sbjct: 564 SMRPPSRMFAPPNFPSIAS-----ADAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQE 618
Query: 431 VKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
+ G+ PTPIQAQ WP+A+ ++++A
Sbjct: 619 IHAAGFLNPTPIQAQTWPVALQNRDIVA 646
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 90.6 bits (215), Expect = 1e-18
Identities = 39/88 (44%), Positives = 59/88 (67%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLA++LP + H+ +QPP+ GDGPI L++APTREL QI F
Sbjct: 323 RDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGPIGLIMAPTRELVVQIHSDIKKFA 382
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ + ++GG+ +Q +L+RG E
Sbjct: 383 KSLGINCVAIYGGSGVAQQISELKRGAE 410
Score = 62.9 bits (146), Expect = 3e-10
Identities = 30/84 (35%), Positives = 47/84 (55%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
QPF KN Y + + EV YR N E+ V G +V PI+ + ++ + +K
Sbjct: 243 QPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKK 302
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+G+++P PIQAQ PI MSG++ +
Sbjct: 303 LGFEKPMPIQAQALPIIMSGRDCI 326
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 744 LGEGSRIVIATPGRLIDFL 800
L G+ IV+ TPGR+ID L
Sbjct: 405 LKRGAEIVVCTPGRMIDIL 423
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 89.8 bits (213), Expect = 2e-18
Identities = 42/88 (47%), Positives = 59/88 (67%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKT A++LP IVHI +QP + + +GPI +V APTRELA QI A F
Sbjct: 257 RDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKFA 316
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+R V+GG K +Q ++L+ G E
Sbjct: 317 KPYNLRVAAVYGGVSKFDQFKELKAGCE 344
Score = 75.4 bits (177), Expect = 5e-14
Identities = 32/84 (38%), Positives = 51/84 (60%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
+PFNK+FY+ P+V S EV +Y + + VSG +V PI+ F + FP + +
Sbjct: 177 EPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAK 236
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
GY++PT IQ Q PI +SG++++
Sbjct: 237 QGYEKPTTIQCQALPIVLSGRDII 260
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +3
Query: 744 LGEGSRIVIATPGRLIDFL 800
L G IVIATPGRLID L
Sbjct: 339 LKAGCEIVIATPGRLIDLL 357
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 87.0 bits (206), Expect = 2e-17
Identities = 38/88 (43%), Positives = 57/88 (64%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLA++LP + H+ +QP + GDGPI L++APTREL QI F
Sbjct: 462 RDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGPIGLIMAPTRELVVQIHSDIKKFS 521
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
+ ++GG+ +Q +L+RG E
Sbjct: 522 KALGINCVAIYGGSGVAQQISELKRGAE 549
Score = 62.5 bits (145), Expect = 4e-10
Identities = 30/84 (35%), Positives = 47/84 (55%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
QPF KNFY + K + EV YR E+ V G +V PI+ + ++ + +K
Sbjct: 382 QPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKK 441
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
+G+++P IQAQ PI MSG++ +
Sbjct: 442 LGFEKPMSIQAQALPIIMSGRDCI 465
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 744 LGEGSRIVIATPGRLIDFL 800
L G+ IV+ TPGR+ID L
Sbjct: 544 LKRGAEIVVCTPGRMIDIL 562
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 79.4 bits (187), Expect = 3e-15
Identities = 43/99 (43%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
Frame = +1
Query: 487 SYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG-------PIALVLAPTRELA 645
S ++ + AQTGSGKT A+ P I I PP +R P+AL+L+PTREL+
Sbjct: 189 SLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELS 248
Query: 646 QQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
QI + A F + + VR +GGAP +Q RDLERGV+
Sbjct: 249 MQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVD 287
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
V SG EV P+ F E + + ++ Y PTP+Q PI+++G++L+A
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMA 197
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 79.4 bits (187), Expect = 3e-15
Identities = 45/97 (46%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Frame = +1
Query: 487 SYVWKEFIGVAQTGSGKTLAYILPAIVHI-NNQPPIR-RGDG---PIALVLAPTRELAQQ 651
S ++ + AQTGSGKT A+ P I I +++PP R RG P+AL+L+PTREL+ Q
Sbjct: 271 SIAGRDLMACAQTGSGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALILSPTRELSVQ 330
Query: 652 IQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
I + A F + + VR +GGAP +Q R+LERGVE
Sbjct: 331 IHEEARKFAYQTGVRVVVAYGGAPIHQQLRELERGVE 367
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
V SG +V P+ F E + D + + ++ Y +PTP+Q PI+++G++L+A
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMA 279
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 77.8 bits (183), Expect = 9e-15
Identities = 43/97 (44%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
Frame = +1
Query: 487 SYVWKEFIGVAQTGSGKTLAYILPAIVHI--NNQPPIRRGDG---PIALVLAPTRELAQQ 651
S ++ + AQTGSGKT A+ P I I + PP RG P+AL+L+PTREL+ Q
Sbjct: 357 SIAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELSVQ 416
Query: 652 IQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
I + A F + + V+ +GGAP +Q R+LERGVE
Sbjct: 417 IHEEARKFAYQTGVKVVVAYGGAPITQQLRELERGVE 453
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
V SG +V P F E + D + + ++ Y +PTP+Q PI+++G++L+A
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMA 365
>03_05_0865 - 28365430-28367640
Length = 736
Score = 76.2 bits (179), Expect = 3e-14
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPI---RRGDGPIALVLAPTRELAQQIQQVAA 669
++ IG+A+TGSGKT A++LP + +I PPI +GP A+V+APTRELAQQI++
Sbjct: 353 RDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEEETV 412
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
F ++ + GG EQ + +G E
Sbjct: 413 KFATYLGIKVVSIVGGQSIEEQGFKIRQGCE 443
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/60 (25%), Positives = 34/60 (56%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R + ++ G +V P++ + E+ + + V+ GYKEP+PIQ P+ + ++++
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVI 356
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 750 EGSRIVIATPGRLIDFL 800
+G +VIATPGRL+D L
Sbjct: 440 QGCEVVIATPGRLLDCL 456
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 74.9 bits (176), Expect = 7e-14
Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINN---QPPIRRGDGPIALVLAPTRELAQQIQQVAA 669
++FIG+A TGSGKT+A+ +PA++H+ + ++G P LVL+PTRELAQQI V
Sbjct: 130 RDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGV-PRVLVLSPTRELAQQIADVLC 188
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+ G + + C++GG K Q L+ GV+
Sbjct: 189 EAGAPCGISSVCLYGGTSKGPQISALKSGVD 219
Score = 32.3 bits (70), Expect = 0.46
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
P+ F P V K G++ P+PIQA WP + G++ +
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRDFI 133
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 72.9 bits (171), Expect = 3e-13
Identities = 38/89 (42%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAI-VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 675
K+ +G A+TG+GKTLA+ +P + I + G P+A+VLAPTRELA+Q+++ +F
Sbjct: 136 KDMVGRAKTGTGKTLAFGIPILDAIIRHNEKNSPGKFPLAIVLAPTRELAKQVER---EF 192
Query: 676 GHTSYVRNTCVFGGAPKREQARDLERGVE 762
+S V CV+GG P +Q R L GV+
Sbjct: 193 SDSSNVETICVYGGTPISQQIRQLNYGVD 221
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 68.1 bits (159), Expect = 8e-12
Identities = 36/89 (40%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 675
K+ IG A+TG+GKTLA+ +P + I + G P+A++LAPTRELA+Q+++ +F
Sbjct: 131 KDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLAIILAPTRELARQVEK---EF 187
Query: 676 GHTSYVRNTCVFGGAPKREQARDLERGVE 762
++ + + CV+GG P Q R L GV+
Sbjct: 188 KESAPLDSLCVYGGVPISHQMRALNYGVD 216
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 64.9 bits (151), Expect = 7e-11
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINN--QPPIRRGD---GPIALVLAPTRELAQQIQQVA 666
+ +G A+TG GKTLA++LP + + N RR D P LVL PTRELA+Q+
Sbjct: 143 DLVGRARTGQGKTLAFVLPILESLVNGTHKASRRTDYGRPPTVLVLLPTRELAKQVHTDF 202
Query: 667 ADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
A +G T + CV+GG+ R Q + +GV+
Sbjct: 203 AFYGATFGLSACCVYGGSDYRSQEMAIRKGVD 234
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 64.5 bits (150), Expect = 9e-11
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +1
Query: 517 AQTGSGKTLAYILPAIVHINNQPPIRRGD--GPIALVLAPTRELAQQIQQVAADFGHTSY 690
A TGSGKT ++++P I H ++ R D GP+A+VLAPTREL Q+++ A G
Sbjct: 226 ADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKVLGKGLP 285
Query: 691 VRNTCVFGGAPKREQARDLERGVE 762
+ V GG P +Q +E G+E
Sbjct: 286 FKTALVVGGDPLAQQIYRIENGIE 309
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 320 EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 499
++ R+ ++ V G +V +PI F + P+ + ++ GY PTP+Q Q P ++
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICN 219
Query: 500 KNLL 511
++LL
Sbjct: 220 RSLL 223
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 61.3 bits (142), Expect = 9e-10
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPP---IRRGDGPIALVLAPTRELAQQIQQVAA 669
++ I A+TG+GKTLA+ +P I + + +RRG P LVLAPTRELA+Q+++
Sbjct: 168 RDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVEKEIK 227
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+ + CV+GG Q L RGV+
Sbjct: 228 E--SAPKLSTVCVYGGVSYNVQQNALSRGVD 256
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 59.7 bits (138), Expect = 3e-09
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = +1
Query: 415 LCATRCKDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHI--NNQPP 588
LCA G Q + + + + + A TG+GKTLAY+ P IVH+ +P
Sbjct: 34 LCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP-IVHLLQMREPR 92
Query: 589 IRRGDGPIALVLAPTRELAQQIQQVAADFGHT-SYVRNTCVFGGAPKREQARDLERGV 759
+ R DG ALVL PTREL Q+ +A H ++ + GG + ++ L +G+
Sbjct: 93 VERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGI 150
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 58.4 bits (135), Expect = 6e-09
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQP---PIRRGD 603
+ G+++ L + ++ IG+A TGSGKTL ++LP I+ + PI G+
Sbjct: 189 RGKGIEKPTPIQVQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGE 248
Query: 604 GPIALVLAPTRELAQQ----IQQVAADFGHTSY--VRNTCVFGGAPKREQARDLERGV 759
GP L++ P+RELA+Q I+ A Y +R GG R Q +++GV
Sbjct: 249 GPFGLIVCPSRELARQTHEVIEMFLAPLMEAGYPEIRPLLCIGGVDMRTQMEVVKKGV 306
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +2
Query: 293 PTVLKRSPYE-VEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 469
P L+R P + R + + V G +V P + F + P+ + + ++ G ++PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 470 AQGWPIAMSGKNLL 511
QG P+A+SG++++
Sbjct: 201 VQGLPVALSGRDMI 214
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ +G A+TGSGKTLA+++PAI +++ + R +G +V+ PTRELA Q VA +
Sbjct: 134 KDVMGAAKTGSGKTLAFLIPAIEMLHHAHFMPR-NGTGVVVVCPTRELAIQTHNVAKELM 192
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGV 759
+ GG +R +A L +GV
Sbjct: 193 KYHSQTLGYIIGGNGRRGEADQLAKGV 219
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAI-VHINNQ--PPIRRGDGPIALVLAPTRELAQQ----IQ 657
++ IG+A TGSGKTL ++LP I V + + PI G+GP +++ P+RELA+Q I+
Sbjct: 220 RDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIE 279
Query: 658 QVAADFGHTSY--VRNTCVFGGAPKREQARDLERGV 759
Q Y +R GG R Q +++G+
Sbjct: 280 QFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGL 315
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Frame = +2
Query: 224 EHASPRLGFCSLQPFNKN--FYDP------HPTVLKRSPY-EVEEYRNNHEVTVSGVEVH 376
EH S R S++ K + DP P L+R P + +E R + V G +V
Sbjct: 119 EHLSDRKTLMSVRELAKGITYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVP 178
Query: 377 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
P + F + P+ + + ++ G +PTPIQ QG P+ +SG++++
Sbjct: 179 PPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMI 223
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 55.2 bits (127), Expect = 6e-08
Identities = 37/108 (34%), Positives = 53/108 (49%)
Frame = +1
Query: 430 CKDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 609
C G++ A + + ++ +G+A+TGSGKT A+ LP I+H + P G
Sbjct: 92 CDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALP-ILHRLGEDPY----GV 146
Query: 610 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 753
AL LAPTRELA Q+ + G +R GG QA+ L R
Sbjct: 147 AALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKGLAR 194
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 51.6 bits (118), Expect = 7e-07
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 612
K G +R ++ + K+ A TGSGKTLA+++P + + +P + +
Sbjct: 39 KGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRPSPPKPHEVL 98
Query: 613 ALVLAPTRELAQQIQQVAADFGHT-SYVRNTCVFGGAPKREQARDLE 750
++++PTREL+ QI VA F T V + + GG + + + LE
Sbjct: 99 GIIISPTRELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLE 145
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 51.2 bits (117), Expect = 9e-07
Identities = 35/108 (32%), Positives = 51/108 (47%)
Frame = +1
Query: 430 CKDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 609
C G + + + + ++ IG+ QTGSGKT A+ LP I + Q +
Sbjct: 56 CDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQALLKQD---KPQAL 112
Query: 610 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 753
A VL+PTRELA QI Q G + T + GG + +QA L +
Sbjct: 113 FACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVSLAK 160
Score = 32.7 bits (71), Expect = 0.35
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
P + E P+ V MG+KEPT IQA+ P A+ G++L+
Sbjct: 40 PSTFAELGVVPELVA-ACDAMGWKEPTRIQAEAIPHALEGRDLI 82
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 50.8 bits (116), Expect = 1e-06
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP--IALVLAPTRELAQQIQQVAAD 672
++ IGV QTGSGKT A+ LP I Q + P A VLAPTRELA QI +
Sbjct: 21 RDVIGVGQTGSGKTAAFALPII-----QALLEHEHRPCFFACVLAPTRELAIQIAKQFEA 75
Query: 673 FGHTSYVRNTCVFGGAPKREQARDLER 753
G ++ + + GG P+ Q L +
Sbjct: 76 LGSAISLQCSVLIGGIPRTSQTISLAK 102
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLL 511
MG+K PT IQA+ P A+ G++++
Sbjct: 1 MGWKAPTRIQAEVIPFALQGRDVI 24
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
Frame = +1
Query: 490 YVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPI--RRGDGPIA-LVLAPTRELAQQ 651
Y+ K+ + A+TG+GKT+A++LPAI ++ PPI + PI+ +V+ PTRELA Q
Sbjct: 490 YIGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVVVCPTRELADQ 546
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 49.6 bits (113), Expect = 3e-06
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Frame = +1
Query: 517 AQTGSGKTLAYILPAI---VHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 687
A+TGSGKTLA+++PAI + P R G G +VL PTRELA Q VA +
Sbjct: 130 AKTGSGKTLAFLIPAIELLCRLRFSP--RNGTG--VIVLCPTRELAIQTHNVAKELMRYH 185
Query: 688 YVRNTCVFGGAPKREQARDLERGV 759
V GG R +A L +G+
Sbjct: 186 SQTLGYVIGGIDLRGEAEQLAKGI 209
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ +A+TGSGKT A+++P I + G G AL+L+PTR+LA Q + A G
Sbjct: 65 DIAAMARTGSGKTAAFLVPMIQRLRRHDA---GAGIRALILSPTRDLATQTLKFAQQLGK 121
Query: 682 TSYVRNTCVFGGAPKREQARDL 747
+ ++ + + GG Q +L
Sbjct: 122 FTDLKISLIVGGDSMESQFEEL 143
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
FE + V +GV+ GY+ PTPIQ + P+ ++G ++ A
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAA 68
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
V VSG +V P FE A + V + V GY+ PTP+Q PIA++G++L+A
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMA 126
Score = 41.1 bits (92), Expect = 0.001
Identities = 41/124 (33%), Positives = 50/124 (40%), Gaps = 36/124 (29%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILP-----------AIVHINNQPPIRRGDGPIALVLAPTRELA 645
++ + AQTGSGKT A+ LP I H R P ALVLAPTRELA
Sbjct: 122 RDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTRELA 181
Query: 646 QQ-------------------------IQQVAADFGHTSYVRNTCVFGGAPKREQARDLE 750
Q I + A F + +R +GG P Q RDLE
Sbjct: 182 AQSFDNVIFIDTVNQNFSLFCYEELDNINEEAKKFSFQTGLRVVVAYGGTPMYNQLRDLE 241
Query: 751 RGVE 762
RG +
Sbjct: 242 RGAD 245
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 48.8 bits (111), Expect = 5e-06
Identities = 39/107 (36%), Positives = 53/107 (49%), Gaps = 25/107 (23%)
Frame = +1
Query: 517 AQTGSGKTLAYILPAI----------VHINNQPP-----IRRGDG----------PIALV 621
+ TGSGKTLAY+LP + + INN P +RR + P A+V
Sbjct: 154 SHTGSGKTLAYLLPLVQIEIENTYRLLPINNGVPANQKLLRRDEAMLGMSMKPRRPRAVV 213
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
L PTREL +Q+ +VA H + R+T V GG+ R Q L V+
Sbjct: 214 LCPTRELTEQVFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVD 260
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 383 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ FEE + V + MG +PT IQ G P ++G +++
Sbjct: 109 VDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVV 151
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 48.4 bits (110), Expect = 7e-06
Identities = 29/102 (28%), Positives = 49/102 (48%)
Frame = +1
Query: 430 CKDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 609
C+ G Q+ ++ + + ++ G A TGSGKT A+ LP + + +P +R
Sbjct: 209 CEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRP--KRVPAI 266
Query: 610 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 735
L+L PTRELA Q+ + + +R + GG + Q
Sbjct: 267 RVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQ 308
Score = 34.7 bits (76), Expect = 0.087
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 508
F E N + + + +GY++PTPIQA P+A++G+++
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDI 234
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 47.2 bits (107), Expect = 2e-05
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGD--- 603
KD G +R + L K+ + A+TG+GKT+A++LPAI ++ P RR
Sbjct: 22 KDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRDQLRP 81
Query: 604 GPIALVLAPTRELAQQI 654
LV+ PTRELA Q+
Sbjct: 82 SINLLVMCPTRELAIQV 98
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F++ + VK GY+ T +Q P+ + GK++LA
Sbjct: 8 FDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLA 48
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILP---AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 669
K+ + A+TGSGKT AY+LP ++ ++ + IR+ P +L PTREL QQ+ A+
Sbjct: 121 KDVVAKAKTGSGKTFAYLLPMLHELLKLSAEGRIRK-SAPNVFILVPTRELCQQVHNEAS 179
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F+E + +++ ++ G + TPIQ + P+ + GK+++A
Sbjct: 85 FDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVA 125
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 46.0 bits (104), Expect = 4e-05
Identities = 26/74 (35%), Positives = 41/74 (55%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 612
KD G ++ + L ++ + A+TG+GKT+A++LPAI ++ P R
Sbjct: 90 KDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELLSTLP---RSPSIN 146
Query: 613 ALVLAPTRELAQQI 654
LV+ PTRELA Q+
Sbjct: 147 LLVICPTRELANQV 160
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +2
Query: 335 RNNHEVTVSGVEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 502
R ++ +SG V P++ FEE Y+ + +G++EPTPIQ Q PI +SG+
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
Query: 503 NLLA 514
A
Sbjct: 185 ECFA 188
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 651
+E A TGSGKTLA++ P ++ I +P + +G A++L PTRELA Q
Sbjct: 184 RECFACAPTGSGKTLAFLFPILMKI--KPGSK--EGVKAVILCPTRELAAQ 230
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/86 (37%), Positives = 43/86 (50%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ I AQ+G+GKT + + ++ + ALVLAPTRELAQQI++V G
Sbjct: 80 DVIQQAQSGTGKTATFCSGILQQLDYAVVECQ-----ALVLAPTRELAQQIEKVMRALGD 134
Query: 682 TSYVRNTCVFGGAPKREQARDLERGV 759
V+ GG RE R L GV
Sbjct: 135 YLGVKVHACVGGTSVREDQRILASGV 160
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 699 HVCVWWCS*KRASPGLGEGSRIVIATPGRLIDFL 800
H CV S + L G +V+ TPGR+ D L
Sbjct: 141 HACVGGTSVREDQRILASGVHVVVGTPGRVFDML 174
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Frame = +1
Query: 481 ADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPP----IRRGD----------GPI-A 615
A ++ K+ IG A+TGSGKTLA+ LP + + + + R D P+ A
Sbjct: 175 AAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQDENSRESPLRA 234
Query: 616 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
L+L PTRELA+Q+ + ++ + GG +Q R L+R E
Sbjct: 235 LILTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPE 283
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +2
Query: 431 VKTMGYKEPTPIQAQGWPIAM-SGKNLL 511
V+ +G+KEPTPIQ +P A GK+++
Sbjct: 157 VRRLGFKEPTPIQKACFPAAAHQGKDVI 184
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/99 (24%), Positives = 45/99 (45%)
Frame = +1
Query: 436 DNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 615
+ G +R + + + + A+ G+GKT A+ +PA+ I+ + +
Sbjct: 151 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEK-----NAIQV 205
Query: 616 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 732
++L PTRELA Q QV + G ++ GG ++
Sbjct: 206 VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKD 244
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*LKRVPAK 538
FE+ + G+ G++ P+PIQ + PIA++G ++LA K K
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 184
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 41.5 bits (93), Expect = 8e-04
Identities = 24/49 (48%), Positives = 28/49 (57%)
Frame = +1
Query: 613 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGV 759
+LVLAPTRELAQQI++V G V+ GG RE R L GV
Sbjct: 112 SLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGV 160
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 699 HVCVWWCS*KRASPGLGEGSRIVIATPGRLIDFL 800
H CV S + L G +V+ TPGR+ D L
Sbjct: 141 HACVGGTSVREDQRILASGVHVVVGTPGRVFDML 174
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/99 (24%), Positives = 44/99 (44%)
Frame = +1
Query: 436 DNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 615
+ G +R + + + + A+ G+GKT A+ +PA+ I+ +
Sbjct: 141 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQ-----V 195
Query: 616 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 732
++L PTRELA Q QV + G ++ GG ++
Sbjct: 196 VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKD 234
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*LKRVPAK 538
FE+ + G+ G++ P+PIQ + PIA++G ++LA K K
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 174
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 41.1 bits (92), Expect = 0.001
Identities = 31/106 (29%), Positives = 47/106 (44%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G ++ A + ++ I AQ+G+GKT L ++ +R AL+
Sbjct: 50 GFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTA--VREVQ---ALI 104
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGV 759
L+PTRELA Q ++V G ++ GG E R LE GV
Sbjct: 105 LSPTRELAAQTERVMLAIGDYINIQVHACIGGKSIGEDIRKLEHGV 150
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +1
Query: 436 DNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINN--QPPIRRGDGP 609
D G +T + L K+ + A+TG+GK+ A++LPAI + N + P
Sbjct: 359 DAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIESVLNAMKSHTNHRVSP 418
Query: 610 I-ALVLAPTRELAQQI 654
I +L+L PTRELA Q+
Sbjct: 419 IFSLILCPTRELAIQL 434
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 41.1 bits (92), Expect = 0.001
Identities = 31/106 (29%), Positives = 47/106 (44%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G ++ A + ++ I AQ+G+GKT L ++ +R AL+
Sbjct: 50 GFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTA--VREVQ---ALI 104
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGV 759
L+PTRELA Q ++V G ++ GG E R LE GV
Sbjct: 105 LSPTRELAAQTERVMLAIGDFINIQVHACIGGKSIGEDIRKLEHGV 150
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/108 (24%), Positives = 48/108 (44%)
Frame = +1
Query: 436 DNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 615
+ G +R + + + + A+ G+GKT A+ +PA+ I+ + +
Sbjct: 164 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPEK-----NAIQV 218
Query: 616 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGV 759
++L PTRELA Q QV + G ++ GG ++ L + V
Sbjct: 219 VILVPTRELALQTSQVCKELGKYLNIQVMVSTGGTSLKDDIMRLYQPV 266
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA*LKRVPAK 538
FE+ + G+ G++ P+PIQ + PIA++G ++LA K K
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 197
>03_02_0189 - 6253659-6255380
Length = 573
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Frame = +1
Query: 523 TGSGKTLAYILPAIVHIN--NQPPIRRG----DGPIALVLAPTRELAQQI-QQVAADFGH 681
TGSGKTLAY+LP + I +P + G G A+++AP+REL QI ++V G
Sbjct: 177 TGSGKTLAYLLPILSEIGPLKRPTEQDGSDKRSGVEAVIVAPSRELGMQIVREVEKILGP 236
Query: 682 TSYVRNTCVFGGAPKREQARDLER 753
+ GGA + Q L++
Sbjct: 237 NDKRLVQQLVGGANRSRQEEALKK 260
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 40.3 bits (90), Expect = 0.002
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Frame = +1
Query: 523 TGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQI-QQVAADFGH 681
TGSGKTLAY+LP + I Q + G A+++AP+REL QI ++V G
Sbjct: 639 TGSGKTLAYLLPILSEIGPLKRPTEQDSSDKRSGVEAVIVAPSRELGMQIVREVEKILGP 698
Query: 682 TSYVRNTCVFGGAPKREQARDLER 753
+ GGA + Q L++
Sbjct: 699 NDKRLVQQLVGGANRSRQEEALKK 722
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +1
Query: 517 AQTGSGKTLAYILPAIVHIN-NQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 693
AQTGSGKTLAY+L I+ + ++ ALV+ PTREL Q+ +VA +
Sbjct: 85 AQTGSGKTLAYLLSVFSAIDFGRSSVQ------ALVVVPTRELGMQVTKVARILAAKACT 138
Query: 694 RNTCVFGGAPKREQA 738
+ GG +R+++
Sbjct: 139 VMALLDGGMLRRQKS 153
Score = 32.7 bits (71), Expect = 0.35
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 410 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
P++V Q + +GY PT +Q Q P+ +SG++ +
Sbjct: 49 PEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCI 82
>03_01_0399 +
3097878-3098141,3098254-3098547,3098659-3098886,
3099148-3099224,3099501-3099540,3099737-3099802,
3100305-3100706,3100777-3100888,3101445-3101530,
3101607-3101672
Length = 544
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +1
Query: 496 WKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 675
+K+ I A GSGKT ++L + ++ + + A+ + PTRELAQQ + V
Sbjct: 140 YKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQ-----AICICPTRELAQQNKSVLMRM 194
Query: 676 GHTSYVRNTCVFGGAPK 726
G + + C A K
Sbjct: 195 GKFTGITCACAIPPAQK 211
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = +1
Query: 520 QTGSGKTLAYILPAIVHINNQ--PPIRRGD--GPIALVLAPTRELAQQI 654
Q+GSGKTLAY+ P + ++ + + R P +VL PT ELA Q+
Sbjct: 285 QSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPRVVVLTPTAELASQV 333
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 37.1 bits (82), Expect = 0.016
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +1
Query: 523 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 663
TGSGKTLAY LP + + R+ ALV+ PTR+LA Q+++V
Sbjct: 83 TGSGKTLAYALPIVQML----ATRKVRCLRALVVLPTRDLALQVKEV 125
>09_03_0167 +
12965030-12965356,12966100-12966387,12966704-12966826,
12967229-12967611,12967863-12968190,12968324-12968353,
12968837-12968989,12969510-12969815
Length = 645
Score = 36.3 bits (80), Expect = 0.028
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHI---------NNQPPIR 594
GL R ++ + + I A+TGSGKT Y++P I + N +
Sbjct: 101 GLARPSLVQAACIPHVLTTNDVIVAAETGSGKTHGYLVPLIEKLCSKSISAEDGNSQDVT 160
Query: 595 RGDGPIALVLAPTRELAQQIQQVA 666
G IALVL P L +Q+ ++A
Sbjct: 161 SGSPNIALVLCPNVMLCEQVVRMA 184
>10_08_0429 +
17845303-17845431,17845508-17845684,17845782-17845895,
17846386-17846520,17847659-17847790,17847919-17848071,
17848574-17848709,17849338-17849443,17849538-17849730,
17849803-17849963,17850227-17850442,17850732-17850997,
17851505-17851779,17851871-17852327,17853973-17854055,
17854260-17854469,17854897-17855373,17855462-17855743,
17855910-17856236,17856418-17856507,17856788-17856899,
17857004-17857104,17857524-17857568
Length = 1458
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 508 IGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP--IALVLAPTRELAQQIQQVAADF 675
I V TGSGKT+ ++ A H +R G+ P I + LAPT L Q +V ++
Sbjct: 56 IAVLDTGSGKTMVAVMLAREHARR---VRAGEAPRRIVVFLAPTVHLVHQQFEVIREY 110
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 33.5 bits (73), Expect = 0.20
Identities = 11/23 (47%), Positives = 20/23 (86%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIV 567
++ +G A+TGSGKTLA+++P ++
Sbjct: 118 RDVLGAAKTGSGKTLAFVIPVLM 140
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
F+E + + G++ GY E + IQ P A+ G+++L
Sbjct: 82 FDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVL 121
>01_05_0296 +
20567259-20567386,20568895-20569123,20569205-20569436,
20569583-20569701,20570321-20570377,20570455-20570639,
20571416-20571560,20571630-20571713,20571798-20571861,
20571889-20571932
Length = 428
Score = 31.5 bits (68), Expect = 0.81
Identities = 26/77 (33%), Positives = 37/77 (48%)
Frame = +1
Query: 517 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 696
A++G GKT ++L ++ I+ P+ G ALVL TRELA QI F
Sbjct: 80 AKSGMGKTAVFVLSSLQQID---PVAGQVG--ALVLCHTRELAYQICHEFERFSKYLPEV 134
Query: 697 NTCVFGGAPKREQARDL 747
VF G ++ +DL
Sbjct: 135 KVAVFYGGVHIKKHKDL 151
>01_05_0295 +
20537147-20537291,20539111-20539283,20539365-20539596,
20539743-20539861,20540480-20540536,20540615-20540799,
20542252-20542396,20542463-20542546,20542634-20542697,
20542799-20542809
Length = 404
Score = 31.5 bits (68), Expect = 0.81
Identities = 26/77 (33%), Positives = 37/77 (48%)
Frame = +1
Query: 517 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 696
A++G GKT ++L ++ I+ P+ G ALVL TRELA QI F
Sbjct: 67 AKSGMGKTAVFVLSSLQQID---PVAGQVG--ALVLCHTRELAYQICHEFERFSKYLPEV 121
Query: 697 NTCVFGGAPKREQARDL 747
VF G ++ +DL
Sbjct: 122 KVAVFYGGVHIKKHKDL 138
>01_07_0205 - 41978437-41980599,41980805-41981215
Length = 857
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 415 LCATRCKDNGLQRTDAYSSSRLADSYVWK--EFIGVAQTGSGKTLAYILPAIVHINNQPP 588
L TR +N + AY +LAD YVW + I + G+ L +I A+V I++ P
Sbjct: 243 LMTTR-SENKSSTSRAYYLGKLADEYVWSIAKQIAFVKEEEGQDLVHIKEAVVTISDGIP 301
Query: 589 I 591
+
Sbjct: 302 L 302
>02_02_0099 +
6768115-6768285,6769950-6770034,6770501-6770628,
6771429-6771465,6773108-6774193,6774337-6774447,
6774701-6774817,6774818-6775120,6776092-6776513,
6776645-6777274
Length = 1029
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 613 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
ALVL PT +LA + Q V G + GG E + L GV+
Sbjct: 730 ALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQILSTGVQ 779
>02_01_0091 + 646299-649082
Length = 927
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G+ + A+ + + + + + T SGK+L Y +P + I+ + P AL
Sbjct: 184 GVTKLYAHQAQAVQSAVSGEHVVVSTSTSSGKSLCYNIPVLESIS------QSSAPCALY 237
Query: 622 LAPTRELAQ 648
+ PT+ LAQ
Sbjct: 238 IFPTKALAQ 246
>08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,
2875909-2875947,2876309-2876354,2877380-2877922,
2878827-2880847,2880972-2881215,2881642-2881684,
2881923-2881962,2883580-2883675,2883712-2883759,
2883964-2884290
Length = 1498
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 228 MRRPDWDSVHSNLSTKTFMIHILQFSKDHH 317
MR PD D S K F IH+ S DHH
Sbjct: 1226 MRSPDDDKPTSWSDQKVFEIHVYPSSNDHH 1255
>07_01_1218 -
11633829-11634628,11634713-11635050,11635349-11635445,
11635482-11635725,11636114-11636122
Length = 495
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 269 NKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQY 391
NK+ Y+ ++ R+P + E+Y NN ++ EV P+++
Sbjct: 137 NKHKYNELGNIIPRTPTDQEKYGNNSSYILNIEEVILPLEF 177
>06_03_0547 + 22001831-22002304
Length = 157
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = +1
Query: 535 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 714
+++ Y A+ H N + G G + L ++ I AD+GH +++ G
Sbjct: 11 QSVMYAEAALEHYNAALVVEGGGGGVVNELVRAI-ISGVIITCRADYGHVNFIARAAASG 69
Query: 715 GAPKREQAR 741
G R++ R
Sbjct: 70 GGTLRQEER 78
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 311 SPYEVEEYRNNHEVTVSGVEVHN 379
SP +EE N E+ V GV++HN
Sbjct: 431 SPQMIEEMNNVRELNVKGVKLHN 453
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,862,290
Number of Sequences: 37544
Number of extensions: 452363
Number of successful extensions: 1223
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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