Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120198.Seq
(801 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 116 1e-26
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 95 7e-20
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 91 8e-19
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 83 2e-16
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 79 5e-15
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 63 3e-10
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 62 4e-10
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 62 4e-10
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 62 4e-10
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 60 2e-09
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 60 2e-09
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 52 4e-07
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 52 4e-07
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 52 5e-07
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 52 5e-07
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 52 5e-07
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 52 5e-07
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 52 5e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 51 8e-07
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 51 8e-07
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 51 8e-07
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 51 1e-06
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 51 1e-06
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 51 1e-06
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 48 1e-05
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 47 1e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 47 2e-05
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 46 3e-05
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 43 2e-04
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 43 2e-04
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 43 3e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 42 7e-04
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 36 0.026
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 36 0.045
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 36 0.045
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 36 0.045
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 35 0.078
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 35 0.078
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 35 0.078
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.31
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 33 0.31
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 32 0.42
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 31 0.96
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.9
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 29 3.9
AL132860-4|CAB60496.1| 762|Caenorhabditis elegans Hypothetical ... 29 3.9
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.9
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.9
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 6.8
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 28 6.8
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 28 6.8
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 8.9
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 116 bits (280), Expect = 1e-26
Identities = 53/88 (60%), Positives = 70/88 (79%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ I +A+TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ DF
Sbjct: 167 RDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFC 226
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
H+ ++ TC+FGGA K QARDLERGV+
Sbjct: 227 HSLGLKMTCLFGGASKGPQARDLERGVD 254
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/87 (33%), Positives = 54/87 (62%)
Frame = +2
Query: 254 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 433
+L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-L 144
Query: 434 KTMGYKEPTPIQAQGWPIAMSGKNLLA 514
+++PT IQ+ WPIAMSG+++++
Sbjct: 145 LYGKFQKPTVIQSISWPIAMSGRDIIS 171
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 744 LGEGSRIVIATPGRLIDFL 800
L G IV+ATPGRL+DFL
Sbjct: 249 LERGVDIVVATPGRLLDFL 267
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 94.7 bits (225), Expect = 7e-20
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ IG+A+TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFA 401
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGVE 762
++ C +GG EQ DL+RG E
Sbjct: 402 KPLGLKVACTYGGVGISEQIADLKRGAE 429
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 266 FNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 442
F KNFY + + + EV+ YR + +TV G++ PI+ + + + +K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 443 GYKEPTPIQAQGWPIAMSGKNLL 511
Y +PT IQAQ P MSG++++
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRDVI 345
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 91.1 bits (216), Expect = 8e-19
Identities = 39/84 (46%), Positives = 59/84 (70%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ +G+A+TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F
Sbjct: 303 RDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFC 362
Query: 679 HTSYVRNTCVFGGAPKREQARDLE 750
+ C +GG K EQ+ +L+
Sbjct: 363 KVYNINPICAYGGGSKWEQSNELQ 386
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Frame = +2
Query: 260 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 439
Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 440 MGYKEPTPIQAQGWPIAMSGKNLLA*LK----RVPAKRWP 547
Y++PTPIQA P A+SG+++L K + A WP
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 83.4 bits (197), Expect = 2e-16
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVA 666
++ IGVA+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++
Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEET 398
Query: 667 ADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
FG ++ V GGA + +Q L GVE
Sbjct: 399 NKFGKLLGIKTVSVIGGASREDQGMKLRMGVE 430
Score = 60.9 bits (141), Expect = 1e-09
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +2
Query: 332 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 78.6 bits (185), Expect = 5e-15
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 6/116 (5%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQ-PPIRRGD-- 603
+ NG ++ S ++ IGV+QTGSGKTLA++LPA++HI+ Q + D
Sbjct: 100 RKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEE 159
Query: 604 ---GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
P LVL+PTRELAQQI+ + + Y ++ C++GG + EQ GVE
Sbjct: 160 QKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-KSVCLYGGGSRPEQVEACRGGVE 214
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Frame = +2
Query: 248 FCSLQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEAN 406
F ++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 407 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLL 511
+ G ++ G+++P+PIQ+Q WP+ +SG++ +
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCI 125
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 62.9 bits (146), Expect = 3e-10
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQP---PIRRGD 603
K G+ A + + ++ IG+A TGSGKT+ ++LP ++ Q P R +
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSE 265
Query: 604 GPIALVLAPTRELAQQIQQVAAD----FGHTSY--VRNTCVFGGAPKREQARDLERGV 759
GP L++ P+RELA+QI + + G +R GG P EQA+D+ G+
Sbjct: 266 GPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGI 323
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 62.1 bits (144), Expect = 4e-10
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQ 648
++ + AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 236
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERG 756
QI + A F + S ++ ++GG R+Q L G
Sbjct: 237 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAG 273
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 341 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L++
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMS 181
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 744 LGEGSRIVIATPGRLIDFL 800
L G+ I+IATPGRLID +
Sbjct: 270 LRAGTHILIATPGRLIDII 288
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 62.1 bits (144), Expect = 4e-10
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQ 648
++ + AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 220
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERG 756
QI + A F + S ++ ++GG R+Q L G
Sbjct: 221 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAG 257
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 341 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L++
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMS 165
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 744 LGEGSRIVIATPGRLIDFL 800
L G+ I+IATPGRLID +
Sbjct: 254 LRAGTHILIATPGRLIDII 272
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 62.1 bits (144), Expect = 4e-10
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQ 648
++ + AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA
Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAI 217
Query: 649 QIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERG 756
QI + A F + S ++ ++GG R+Q L G
Sbjct: 218 QIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAG 254
Score = 45.2 bits (102), Expect = 6e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 341 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L++
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMS 162
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 744 LGEGSRIVIATPGRLIDFL 800
L G+ I+IATPGRLID +
Sbjct: 251 LRAGTHILIATPGRLIDII 269
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 59.7 bits (138), Expect = 2e-09
Identities = 36/106 (33%), Positives = 54/106 (50%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G ++ A + K+ I AQ+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGV 759
+APTRELAQQIQ+V + G V GG R+ R LE G+
Sbjct: 103 MAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGI 148
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 59.7 bits (138), Expect = 2e-09
Identities = 36/106 (33%), Positives = 54/106 (50%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G ++ A + K+ I AQ+G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGV 759
+APTRELAQQIQ+V + G V GG R+ R LE G+
Sbjct: 103 MAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGI 148
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
+ +G A+T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI +
Sbjct: 420 DVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEAL 479
Query: 667 ADFGHTSYVRNTCVFGGAPKREQARDLERGVE 762
+ + + +G + + ++ G +
Sbjct: 480 RTYCQNTDIIVLLSYGQSDRARSLNEIRNGCD 511
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 52.4 bits (120), Expect = 4e-07
Identities = 28/79 (35%), Positives = 46/79 (58%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + +++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELG 117
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ +R C+ GG EQ
Sbjct: 118 RFTGLRCACLVGGDQIEEQ 136
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 374 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
H +++ V + ++ G+ +PTPIQ + P M GK+++A
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 52.4 bits (120), Expect = 4e-07
Identities = 28/79 (35%), Positives = 46/79 (58%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + +++TGSGKT A+++P + + R G AL+++PTRELA Q +V + G
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELG 117
Query: 679 HTSYVRNTCVFGGAPKREQ 735
+ +R C+ GG EQ
Sbjct: 118 RFTGLRCACLVGGDQIEEQ 136
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 374 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
H +++ V + ++ G+ +PTPIQ + P M GK+++A
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 52.0 bits (119), Expect = 5e-07
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVA 666
K+ + AQTGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEG 395
Query: 667 ADFGHTSYVRNTCVFGG 717
F + S + V+GG
Sbjct: 396 RKFSYQSVMEIKPVYGG 412
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
P + F +++ P +++ V+ GY TPIQ P+ GK++LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 52.0 bits (119), Expect = 5e-07
Identities = 29/87 (33%), Positives = 52/87 (59%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ + A+TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V ++
Sbjct: 106 KDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELL 164
Query: 679 HTSYVRNTCVFGGAPKREQARDLERGV 759
S + V GG+ + + L +GV
Sbjct: 165 EGSNLTYGLVMGGSNRSAEKDKLAKGV 191
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 52.0 bits (119), Expect = 5e-07
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVA 666
K+ + AQTGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEG 395
Query: 667 ADFGHTSYVRNTCVFGG 717
F + S + V+GG
Sbjct: 396 RKFSYQSVMEIKPVYGG 412
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
P + F +++ P +++ V+ GY TPIQ P+ GK++LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 52.0 bits (119), Expect = 5e-07
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ +G A+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGK 182
Query: 682 TSYVRNTCVFGGAPKREQARDL 747
++ + + GG QAR+L
Sbjct: 183 PITLKCSVIVGGRSLIHQAREL 204
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 52.0 bits (119), Expect = 5e-07
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGH 681
+ +G A+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI + G
Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAEQFTALGK 182
Query: 682 TSYVRNTCVFGGAPKREQARDL 747
++ + + GG QAR+L
Sbjct: 183 PITLKCSVIVGGRSLIHQAREL 204
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAA 669
+ + AQTGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGR 439
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERG 756
F + + + V+GG +E+G
Sbjct: 440 KFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAA 669
+ + AQTGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGR 439
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERG 756
F + + + V+GG +E+G
Sbjct: 440 KFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAA 669
+ + AQTGSGKT A++LP + + + + G+G P ++L PTRELA QI
Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGR 439
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERG 756
F + + + V+GG +E+G
Sbjct: 440 KFAYQTMMEIKPVYGGLAVGYNKGQIEKG 468
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 380 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAA 669
+ + AQTGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGR 650
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERG 756
F + + + V+GG +E+G
Sbjct: 651 KFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAA 669
+ + AQTGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGR 650
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERG 756
F + + + V+GG +E+G
Sbjct: 651 KFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAA 669
+ + AQTGSGKT A++LP + + ++ + G+G P ++L PTREL QI
Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGR 650
Query: 670 DFGHTSYVRNTCVFGGAPKREQARDLERG 756
F + + + V+GG +E+G
Sbjct: 651 KFAYQTMMEIRPVYGGLAVGYNKGQIEKG 679
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 50.4 bits (115), Expect = 1e-06
Identities = 35/108 (32%), Positives = 49/108 (45%)
Frame = +1
Query: 430 CKDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGP 609
C+ G + + L + K+ IG+A+TGSGKT A+ +P + + + P
Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP-----QAF 113
Query: 610 IALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 753
LVL PTRELA QI Q G + + GG QA L R
Sbjct: 114 FCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALAR 161
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 48.4 bits (110), Expect = 6e-06
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 660
++ +G A+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
Query: 661 VAADFGHTSYVRNTCVFGGAPKREQAR 741
T+ + T + GG + +Q R
Sbjct: 87 HINALISTTQLIATSIVGGLAQVKQER 113
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 48.4 bits (110), Expect = 6e-06
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 660
++ +G A+TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
Query: 661 VAADFGHTSYVRNTCVFGGAPKREQAR 741
T+ + T + GG + +Q R
Sbjct: 254 HINALISTTQLIATSIVGGLAQVKQER 280
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/105 (30%), Positives = 50/105 (47%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G ++ A + ++ I AQ+G+GKT + + + ++ Q +R AL+
Sbjct: 45 GFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALI 99
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 756
L+PTRELA QIQ+V G V+ GG E R L+ G
Sbjct: 100 LSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYG 144
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/86 (34%), Positives = 45/86 (52%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
++ I AQ+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G
Sbjct: 64 RDVIAQAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALG 118
Query: 679 HTSYVRNTCVFGGAPKREQARDLERG 756
V+ GG E R L+ G
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYG 144
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELA 645
++ + AQTGSGKT A+++P + I P R+ P ALVL+PTREL+
Sbjct: 204 RDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELS 263
Query: 646 QQIQQVAADFGHTSYVRNTCVFGGAPK-REQARDLERG 756
QI + F + + + + ++GG ++Q L G
Sbjct: 264 LQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLG 301
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 350 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L++
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMS 208
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIAL 618
G ++ + S ++ + K +G A+TGSGKT A+++P + + + G GP A+
Sbjct: 108 GWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAV 167
Query: 619 VLAPTRELAQQIQQV 663
++APT+EL QI ++
Sbjct: 168 IIAPTKELITQIYKL 182
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/73 (35%), Positives = 39/73 (53%)
Frame = +1
Query: 433 KDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 612
KDN + +A S + +G A+TGSGKTLA ++P ++ + G
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDYGLG 150
Query: 613 ALVLAPTRELAQQ 651
AL+++PTRELA Q
Sbjct: 151 ALIISPTRELALQ 163
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
+ + A TGSGKTLA+++P ++ + ++ P L++APTREL Q A
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTA 834
Query: 667 ADFGHTSYVRNTCVFGGAPKREQARDL 747
+ + ++ FGG + + L
Sbjct: 835 RQLTYETGLKCGLAFGGYSRNANVQHL 861
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +1
Query: 502 EFIGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVA 666
+ + A TGSGKTLA+++P ++ + ++ P L++APTREL Q A
Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTA 834
Query: 667 ADFGHTSYVRNTCVFGGAPKREQARDL 747
+ + ++ FGG + + L
Sbjct: 835 RQLTYETGLKCGLAFGGYSRNANVQHL 861
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/99 (26%), Positives = 47/99 (47%)
Frame = +1
Query: 436 DNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 615
+ G ++ + + + ++ + A+ G+GKT AY +P I I QP ++ A
Sbjct: 60 EKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ---A 114
Query: 616 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 732
+V+ PTRELA Q Q+ + ++ GG R+
Sbjct: 115 MVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRD 153
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/65 (41%), Positives = 34/65 (52%)
Frame = +1
Query: 523 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNT 702
TGSGKTLA++LP + I N G AL+L+P+REL QI V F +
Sbjct: 55 TGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPFAEKLNLTVE 112
Query: 703 CVFGG 717
V GG
Sbjct: 113 TVTGG 117
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/86 (32%), Positives = 39/86 (45%)
Frame = +1
Query: 499 KEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
K+ A TG+GKT A++LP + + +P + LVL PTRELA Q+ QV
Sbjct: 186 KDICACAATGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQVFRKLS 243
Query: 679 HTSYVRNTCVFGGAPKREQARDLERG 756
+ GG + Q L G
Sbjct: 244 TFIQLEVCLCAGGLDLKAQEAALRSG 269
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 392 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLLA 514
FE+ N + + GY +PTPIQ P+A++GK++ A
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICA 190
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 702 VCVWWCS*KRASPGLGEGSRIVIATPGRLIDFL 800
+C K L G +V+ATPGRLID L
Sbjct: 252 LCAGGLDLKAQEAALRSGPDVVVATPGRLIDHL 284
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 36.3 bits (80), Expect = 0.026
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +1
Query: 427 RCKDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPA---IVHINNQPPIRR 597
R +N +++ + + + A TGSGKTLA+ LP I+ + +
Sbjct: 140 RLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSS 199
Query: 598 GDGP--IALVLAPTRELAQQ 651
+ +A+VL PTRELA Q
Sbjct: 200 SNSSKLLAVVLEPTRELAAQ 219
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 35.5 bits (78), Expect = 0.045
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +1
Query: 508 IGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
I AQ+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 252 IAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 35.5 bits (78), Expect = 0.045
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +1
Query: 508 IGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
I AQ+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 277 IAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 35.5 bits (78), Expect = 0.045
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +1
Query: 508 IGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 678
I AQ+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 661 IAQAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 34.7 bits (76), Expect = 0.078
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 517 AQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 696
A TGSGKT+ Y+LP + + ++P A++L P + L QI + S V
Sbjct: 163 APTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVDEFKRWNDESGVA 218
Query: 697 NTCVFGGAPKRE-QARDL 747
GA E +AR L
Sbjct: 219 KVVSLSGANDFEKEARQL 236
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 34.7 bits (76), Expect = 0.078
Identities = 23/109 (21%), Positives = 53/109 (48%)
Frame = +1
Query: 427 RCKDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 606
R K++ R + + + ++ + A++G+GKTL + + A+ ++++ R
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSH 90
Query: 607 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 753
+++ PTRE++ QI++ T R + GG+ + DL++
Sbjct: 91 IQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDLKQ 138
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 34.7 bits (76), Expect = 0.078
Identities = 23/109 (21%), Positives = 53/109 (48%)
Frame = +1
Query: 427 RCKDNGLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 606
R K++ R + + + ++ + A++G+GKTL + + A+ ++++ R
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSH 90
Query: 607 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 753
+++ PTRE++ QI++ T R + GG+ + DL++
Sbjct: 91 IQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDLKQ 138
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +1
Query: 517 AQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 654
A TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 136 APTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3
Query: 751 SPSPGLALF*EHHQTHTCYEHKMCVQNLQQLAEFVVL 641
+P PGL L +HH +HT +H +C+Q + A VL
Sbjct: 18 NPKPGLILG-DHHISHTINQHHLCIQKKRLKAGTTVL 53
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/89 (24%), Positives = 40/89 (44%)
Frame = +1
Query: 442 GLQRTDAYSSSRLADSYVWKEFIGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 621
G ++ A S +A K+ +Q GSGKT+ ++ + I+ + + ++
Sbjct: 15 GFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-----VIL 69
Query: 622 LAPTRELAQQIQQVAADFGHTSYVRNTCV 708
LAP R +AQ+ + G V TC+
Sbjct: 70 LAPQRGMAQRAHEQLKSLGRNLNVNATCL 98
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 31.1 bits (67), Expect = 0.96
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 94 VETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKN 210
+ETV+ LE N +RL+ A VA E LE + GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 523 TGSGKTLAYILPAIVH 570
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 656 SKLLQILDTHLMFVTRVCLVVLLKESK 736
+KLL LDT +FVTR C ++ K +K
Sbjct: 372 AKLLFTLDTDTIFVTRRCFAIVSKANK 398
>AL132860-4|CAB60496.1| 762|Caenorhabditis elegans Hypothetical
protein Y56A3A.5 protein.
Length = 762
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 245 GFCSLQPFNKNFYDPHPTVLKRSPYEVEEYRNN 343
GFCS+ P N+ + LK YEV+E++ N
Sbjct: 478 GFCSVSPSNQRAVEETIGKLKELGYEVKEFKVN 510
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -3
Query: 505 ILSRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 326
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 325 D 323
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -3
Query: 505 ILSRHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 326
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 325 D 323
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 146 RIIAEFVASSKFGTTVSTAIIPV 78
++I +FVA S G T+STA P+
Sbjct: 221 QLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 146 RIIAEFVASSKFGTTVSTAIIPV 78
++I +FVA S G T+STA P+
Sbjct: 130 QLIGDFVAGSLLGATISTAFFPL 152
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 594 PNRRLVVYVHNGWQDVGQRFAGTRLSYANKF 502
PN RL VH+ ++ +RFA + L+Y N+F
Sbjct: 1623 PNERLNAEVHHT-DNIYERFANSHLTYRNEF 1652
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -3
Query: 496 RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFDFI 317
R S+RP + +R+ F+ L L+H+ I + +M +L IIS ++
Sbjct: 224 RKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QYL 275
Query: 316 W*SFENCRMWIIKVF 272
W + C + I +F
Sbjct: 276 WQLAQGCPVIIYLIF 290
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 222 DLQRILFSHQILQILQIYCHRCQIETN-YR-RICCL 121
D +S I QI+ +CH+ +++TN +R RI CL
Sbjct: 268 DASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCL 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,773,007
Number of Sequences: 27780
Number of extensions: 386346
Number of successful extensions: 1136
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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