Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120197.Seq
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    26   0.37 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   1.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.0  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 137 HRCAVRKLFKQANSKHVFDHFGCSSNYCFNNYVCSI 244
           H+C   + F   N +  F  + C SN C N  VC I
Sbjct: 360 HKCTCPEGFYGKNCE--FSGYDCDSNPCQNGGVCRI 393


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 399 CR*VYKNETCQMQQSSNGHRNCK 467
           C+  +K +TC ++ S   H  CK
Sbjct: 132 CKNGWKGKTCSLKDSHCDHTTCK 154


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -3

Query: 610 WVISRVLSIAMYLLSANLIFRVS*LSKLLRFFKSIRPIRRFFGS 479
           W+ S  + +  Y +  +  + V   +  L  F S+ PI+RFF S
Sbjct: 135 WISSVGVRMFQYYIGRSFTYYVCNTTIFL-IFHSVLPIKRFFTS 177


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 519 FLNQFGQFVGFLDLFIAVYNFGDRSN 442
           +++Q   + GFL +  ++  F  RSN
Sbjct: 108 YIDQMAGYTGFLAMLTSMVMFYKRSN 133


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 519 FLNQFGQFVGFLDLFIAVYNFGDRSN 442
           +++Q   + GFL +  ++  F  RSN
Sbjct: 64  YIDQMAGYTGFLAMLTSMVMFYKRSN 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,253
Number of Sequences: 336
Number of extensions: 3031
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)