Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120193.Seq
         (839 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy c...    30   9.1  

>AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy chain
            DNAH5 protein.
          Length = 4624

 Score = 30.3 bits (65), Expect = 9.1
 Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 3/117 (2%)
 Frame = +2

Query: 233  LPTNVLSEGVSSSQTNCQAVGH*KNISSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCK 412
            L   VLSE  S   +N  +V +    S++ + G F  L  S          +T T    +
Sbjct: 888  LDVEVLSEEESEKISNENSVNYKNESSAKREEGNFDTLTSSINARANALLLTTVTRKKKE 947

Query: 413  NEKLLNKLES--SSYNKSNMDQLIAIV-NFLEKKNLTISST*CLSCRTNAKCPNARR 574
             E L  +     S +N  NMD L+ +  N LE     I S+  ++ R +    N ++
Sbjct: 948  TEMLGEEARELLSHFNHQNMDALLKVTRNTLEAIRKRIHSSHTINFRDSNSASNMKQ 1004


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,999,482
Number of Sequences: 237096
Number of extensions: 2776770
Number of successful extensions: 5734
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5731
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)