Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120193.Seq
         (839 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-P...    32   1.1  
AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB...    30   4.5  
AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA...    30   4.5  
BT021460-1|AAX33608.1| 1761|Drosophila melanogaster AT17561p pro...    29   6.0  
AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-P...    29   6.0  
DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b...    29   7.9  

>AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-PA
            protein.
          Length = 1895

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 17/73 (23%), Positives = 35/73 (47%)
 Frame = +2

Query: 242  NVLSEGVSSSQTNCQAVGH*KNISSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEK 421
            N+ S+  +++Q N Q+    +N  S+ Q      +Q  N  N+  +  + +     KN+ 
Sbjct: 1794 NIQSKNQNNNQNNIQSKS--QNNQSKNQNNNQNNIQSKNQNNIQSKNQNNQNNIQSKNQN 1851

Query: 422  LLNKLESSSYNKS 460
              N ++S + NK+
Sbjct: 1852 NQNNMQSKNQNKN 1864


>AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB,
           isoform B protein.
          Length = 947

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +2

Query: 311 SSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVN 490
           SS   +  ++ L +S+    P   SS       ++E   N LE S    S+MDQLI ++ 
Sbjct: 452 SSSNSSHLYQNLLRSSSGETPAGSSSAGNNCDYRHENNQNGLEDSPRRHSSMDQLIGLLE 511

Query: 491 FLEKKNLTIS 520
            + K   T S
Sbjct: 512 NMGKSPRTRS 521


>AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA,
           isoform A protein.
          Length = 1218

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +2

Query: 311 SSRIQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVN 490
           SS   +  ++ L +S+    P   SS       ++E   N LE S    S+MDQLI ++ 
Sbjct: 723 SSSNSSHLYQNLLRSSSGETPAGSSSAGNNCDYRHENNQNGLEDSPRRHSSMDQLIGLLE 782

Query: 491 FLEKKNLTIS 520
            + K   T S
Sbjct: 783 NMGKSPRTRS 792


>BT021460-1|AAX33608.1| 1761|Drosophila melanogaster AT17561p
           protein.
          Length = 1761

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = +1

Query: 76  LTRSEIQALFREAI-NTLKHTMN--TEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKC 246
           LT+    A F+EA  N LK   +   + +     DI   ER+ EYIR N   + ++T   
Sbjct: 72  LTKLHTNATFQEAFDNLLKLAKSPLVKSLVGDDFDIGEIERVFEYIRTNQLIYDILTTVA 131

Query: 247 SKRRCV 264
               CV
Sbjct: 132 DLMDCV 137


>AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-PC,
           isoform C protein.
          Length = 1997

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = +1

Query: 76  LTRSEIQALFREAI-NTLKHTMN--TEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKC 246
           LT+    A F+EA  N LK   +   + +     DI   ER+ EYIR N   + ++T   
Sbjct: 308 LTKLHTNATFQEAFDNLLKLAKSPLVKSLVGDDFDIGEIERVFEYIRTNQLIYDILTTVA 367

Query: 247 SKRRCV 264
               CV
Sbjct: 368 DLMDCV 373


>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
            calmodulin-binding transcriptionactivator protein.
          Length = 2009

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 365  NMPEQQSSTETAAVCKNEKLLNKLESSSYNKSN 463
            N  +Q ++T TAA C N K  N L   S+  +N
Sbjct: 1021 NQQQQITTTSTAATCDNLKSANALSEDSHTVNN 1053


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,313,766
Number of Sequences: 53049
Number of extensions: 899936
Number of successful extensions: 2644
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2639
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)