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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120193.Seq
         (839 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    29   0.071
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    29   0.071
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    29   0.071
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    29   0.071
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    29   0.071
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    29   0.071
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    29   0.071
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    29   0.071
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    29   0.071
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    29   0.071
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    28   0.093
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    26   0.38 
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    26   0.38 
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    26   0.38 
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    26   0.38 
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    26   0.38 
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              23   3.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   4.6  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          23   4.6  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          23   4.6  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          23   4.6  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          23   4.6  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          23   4.6  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   4.6  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   4.6  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   4.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   4.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   4.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   8.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   8.1  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   8.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   8.1  

>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 0.071
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 332 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 499
           +++   K    N  E++ S E   +  N  L N    ++    YNK N ++L   +N++E
Sbjct: 58  KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117

Query: 500 K 502
           +
Sbjct: 118 Q 118


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 0.071
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 332 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 499
           +++   K    N  E++ S E   +  N  L N    ++    YNK N ++L   +N++E
Sbjct: 58  KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117

Query: 500 K 502
           +
Sbjct: 118 Q 118


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 0.071
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 332 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 499
           +++   K    N  E++ S E   +  N  L N    ++    YNK N ++L   +N++E
Sbjct: 58  KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117

Query: 500 K 502
           +
Sbjct: 118 Q 118


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 0.071
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 332 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 499
           +++   K    N  E++ S E   +  N  L N    ++    YNK N ++L   +N++E
Sbjct: 58  KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117

Query: 500 K 502
           +
Sbjct: 118 Q 118


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 0.071
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 332 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 499
           +++   K    N  E++ S E   +  N  L N    ++    YNK N ++L   +N++E
Sbjct: 58  KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117

Query: 500 K 502
           +
Sbjct: 118 Q 118


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 0.071
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 332 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 499
           +++   K    N  E++ S E   +  N  L N    ++    YNK N ++L   +N++E
Sbjct: 58  KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117

Query: 500 K 502
           +
Sbjct: 118 Q 118


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 0.071
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 332 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 499
           +++   K    N  E++ S E   +  N  L N    ++    YNK N ++L   +N++E
Sbjct: 58  KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117

Query: 500 K 502
           +
Sbjct: 118 Q 118


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 0.071
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 332 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 499
           +++   K    N  E++ S E   +  N  L N    ++    YNK N ++L   +N++E
Sbjct: 58  KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117

Query: 500 K 502
           +
Sbjct: 118 Q 118


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 28.7 bits (61), Expect = 0.071
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 332 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 499
           +++   K    N  E++ S E   +  N  L N    ++    YNK N ++L   +N++E
Sbjct: 291 KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 350

Query: 500 K 502
           +
Sbjct: 351 Q 351


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 28.7 bits (61), Expect = 0.071
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 332 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 499
           +++   K    N  E++ S E   +  N  L N    ++    YNK N ++L   +N++E
Sbjct: 291 KYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 350

Query: 500 K 502
           +
Sbjct: 351 Q 351


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 28.3 bits (60), Expect = 0.093
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +2

Query: 332 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLE 499
           +++   K    N  E++ S E   +  N  L N    ++    YNK N ++L   +N++E
Sbjct: 58  KYRETSKERSRNRTERERSKEPKIISNNNPLSNNYNYNNNYNNYNKHNYNKLYYNINYIE 117

Query: 500 K 502
           +
Sbjct: 118 Q 118


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = +2

Query: 332 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEK 502
           +++   K    +  E++ S E   +     L N    S+YN +N  QL   +N++E+
Sbjct: 58  KYRKTSKERSRDRTERERSKEPKII---SSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = +2

Query: 332 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEK 502
           +++   K    +  E++ S E   +     L N    S+YN +N  QL   +N++E+
Sbjct: 58  KYRKTSKERSRDRTERERSKEPKII---SSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = +2

Query: 332 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEK 502
           +++   K    +  E++ S E   +     L N    S+YN +N  QL   +N++E+
Sbjct: 58  KYRKTSKERSRDRTERERSKEPKII---SSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = +2

Query: 332 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEK 502
           +++   K    +  E++ S E   +     L N    S+YN +N  QL   +N++E+
Sbjct: 58  KYRKTSKERSRDRTERERSKEPKII---SSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = +2

Query: 332 RFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEK 502
           +++   K    +  E++ S E   +     L N    S+YN +N  QL   +N++E+
Sbjct: 58  KYRKTSKERSRDRTERERSKEPKII---SSLSNNYNYSNYNNNNYKQLCYNINYIEQ 111


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 413 NEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNLTISST*CLSC 541
           NEK+ + +  +  N +  DQL+A  + +   N  I  +  L C
Sbjct: 80  NEKISSDIVRAVLNDNEADQLLAECSPISDPNALIKISKILEC 122


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 738 KWPTDRHRLFKRQRSNSSEPK 800
           +WP D   L  R  ++S++PK
Sbjct: 92  RWPGDATGLSNRSSTSSNDPK 112


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 320 IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 445
           ++  R K L K +    PE +  +  +   K   L  KLESS
Sbjct: 65  LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFILSEKLESS 106


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 320 IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 445
           ++  R K L K +    PE +  +  +   K   L  KLESS
Sbjct: 65  LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFILSEKLESS 106


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 320 IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 445
           ++  R K L K +    PE +  +  +   K   L  KLESS
Sbjct: 65  LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFILSEKLESS 106


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 320 IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 445
           ++  R K L K +    PE +  +  +   K   L  KLESS
Sbjct: 65  LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFILSEKLESS 106


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 320 IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 445
           ++  R K L K +    PE +  +  +   K   L  KLESS
Sbjct: 65  LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFILSEKLESS 106


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 320 IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 445
           ++  R K L K +    PE +  +  +   K   L  KLESS
Sbjct: 65  LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFILSEKLESS 106


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 320 IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 445
           ++  R K L K +    PE +  +  +   K   L  KLESS
Sbjct: 65  LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFILSEKLESS 106


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 320 IQAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESS 445
           ++  R K L K +    PE +  +  +   K   L  KLESS
Sbjct: 65  LRRAREKKLSKRSKSRSPESRGRSNASNTSKTFILSEKLESS 106


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +1

Query: 196  EYIRANLGHFTVITDKCSKRRCVFITNELPGCWALKKYIIKNTSGSFQ 339
            +Y   N  H+T++++    +R   +TN  P      K    N +GS Q
Sbjct: 1535 QYRPINEFHWTLVSNSVKMQRRFVVTNLQPSSVYQLKVETHNVAGSNQ 1582


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +1

Query: 196  EYIRANLGHFTVITDKCSKRRCVFITNELPGCWALKKYIIKNTSGSFQ 339
            +Y   N  H+T++++    +R   +TN  P      K    N +GS Q
Sbjct: 1531 QYRPINEFHWTLVSNSVKMQRRFVVTNLQPSSVYQLKVETHNVAGSNQ 1578


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 747 TDRHRLFKRQRSNSSEPKKTD 809
           +++HRL  R  +N S   KTD
Sbjct: 203 SEQHRLQNRLYTNDSTSSKTD 223


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 747 TDRHRLFKRQRSNSSEPKKTD 809
           +++HRL  R  +N S   KTD
Sbjct: 241 SEQHRLQNRLYTNDSTSSKTD 261


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +3

Query: 75  LDPKRNTSAVQGSHQHAQAHNEY 143
           + P++     Q   QH QAH ++
Sbjct: 179 MQPQQGQHQSQAQQQHLQAHEQH 201


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 499 KKELNYILNVMPVMQDERKMSKRKKKVINNN 591
           KKE        PV+   ++  K ++K IN++
Sbjct: 792 KKERKTATTTQPVISSRKEQKKSEEKNINDH 822


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,169
Number of Sequences: 438
Number of extensions: 5610
Number of successful extensions: 39
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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