Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120192.Seq
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    25   0.67 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          25   0.67 
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    24   1.2  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    24   1.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   3.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   3.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   6.3  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    22   6.3  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   6.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.3  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 675 YTSVQIVSVQRHCHVIKHIC 734
           YTS Q+V ++R  H  K++C
Sbjct: 92  YTSSQLVELEREFHRSKYLC 111


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 675 YTSVQIVSVQRHCHVIKHIC 734
           YTS Q+V ++R  H  K++C
Sbjct: 112 YTSSQLVELEREFHRSKYLC 131


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +2

Query: 185 DDIVKEGSNKVGTNSIFLGTVYDLELNRQTRPAHLVM*P*RAAPQTLISRN 337
           +DIV    +K+   S+    +YD+  N Q  P      P R  P+  + R+
Sbjct: 70  EDIVTYSGHKLKAGSMVHLHIYDMHHNPQVYPDPEKFDPDRFLPENCLKRH 120


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = -1

Query: 348 HGFKFLDIKVCGAARHGHITRCAGRVWRFNSKSYTVPRKMLLVPTLLEPSL 196
           H F+ L   +    RH  +T    ++ R  +K+ + P + +LV  +L+P +
Sbjct: 103 HRFR-LKFNISSIPRHEKLTAAEIKLTRETAKNTSHPFQRVLVHDILQPGV 152


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 388  EDNGMLRFEVDSMIVCLIDPNTGPLSERE-VRELRKSNCTLGTRKTRQLSKFYW 546
            +D G L F V+ +  C+I        E E +R++++S   L  RK   L K  +
Sbjct: 1072 DDEGGLEFSVNKLFKCMICTYKADNKENEQLRKIQESLRDL-NRKIESLEKMQY 1124


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 388  EDNGMLRFEVDSMIVCLIDPNTGPLSERE-VRELRKSNCTLGTRKTRQLSKFYW 546
            +D G L F V+ +  C+I        E E +R++++S   L  RK   L K  +
Sbjct: 1072 DDEGGLEFSVNKLFKCMICTYKADNKENEQLRKIQESLRDL-NRKIESLEKMQY 1124


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 380 LVGVIPLNTINMDLNSLISKFAVPRVMVTLL 288
           +VGV PLN +N +   L   F   +V+ T L
Sbjct: 37  IVGVFPLNHLNEEPEKLHFTFKSWKVLYTSL 67


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 675 YTSVQIVSVQRHCHVIKHIC 734
           YT+ Q++ +++  H  K++C
Sbjct: 11  YTNTQLLELEKEFHFNKYLC 30


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 675 YTSVQIVSVQRHCHVIKHIC 734
           YT+ Q++ +++  H  K++C
Sbjct: 142 YTNTQLLELEKEFHFNKYLC 161


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 458 RCPNERCANCANPTAL 505
           + P E CA C N T+L
Sbjct: 723 KVPGECCAICVNATSL 738


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 181 YRRHSQRGLQQSGH*QHFSGHRIRLGVKSPNAAS 282
           ++  S  G   +GH +  S HRI +  +SP+  S
Sbjct: 79  FKFSSSVGWSPAGHEEAQSPHRIYMHPESPSKGS 112


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -2

Query: 521 VFRVPRVQLDLRNSRTSRSDSGP-VLGSIKHTIMLSTSNRN 402
           +FR P++ L             P V+G +KH   L+ SN+N
Sbjct: 18  LFRWPKIGLSALGFLIIAGCVSPFVIGYVKHFHPLALSNKN 58


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = +2

Query: 185 DDIVKEGSNKVGTNSIFLGTVYDLELNRQTRPAHLVM*P*RAAPQTLISRN 337
           +D+V    +K+   SI    +YDL  N    P      P R  P+    R+
Sbjct: 387 EDLVTHSGHKLAKGSIVNLHIYDLHHNPAIYPDPEKFDPDRFLPENCQKRH 437


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 203 GSNKVGTNSIFLGTVYD 253
           G+N++GT  IFL   +D
Sbjct: 492 GNNRMGTCRIFLAPQFD 508


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,426
Number of Sequences: 336
Number of extensions: 3880
Number of successful extensions: 21
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)