Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120191.Seq
         (746 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    23   3.0  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    23   3.0  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    23   3.0  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    23   3.0  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    23   3.0  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    23   3.0  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    23   3.0  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    23   3.0  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    23   4.0  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    23   4.0  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    23   4.0  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   4.0  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   5.3  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   5.3  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   5.3  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   5.3  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   7.0  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   7.0  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    22   7.0  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    22   7.0  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    22   7.0  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   7.0  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    22   7.0  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    22   7.0  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    22   7.0  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   7.0  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   9.3  

>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +3

Query: 693 HNYHFNFYSNYINNS 737
           +NY+++ Y+NY NN+
Sbjct: 87  NNYNYSNYNNYNNNN 101


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +3

Query: 693 HNYHFNFYSNYINNS 737
           +NY+++ Y+NY NN+
Sbjct: 87  NNYNYSNYNNYNNNN 101


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +3

Query: 693 HNYHFNFYSNYINNS 737
           +NY+++ Y+NY NN+
Sbjct: 87  NNYNYSNYNNYNNNN 101


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +3

Query: 693 HNYHFNFYSNYINNS 737
           +NY+++ Y+NY NN+
Sbjct: 87  NNYNYSNYNNYNNNN 101


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +3

Query: 693 HNYHFNFYSNYINNS 737
           +NY+++ Y+NY NN+
Sbjct: 87  NNYNYSNYNNYNNNN 101


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +3

Query: 693 HNYHFNFYSNYINNS 737
           +NY+++ Y+NY NN+
Sbjct: 87  NNYNYSNYNNYNNNN 101


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +3

Query: 693 HNYHFNFYSNYINNS 737
           +NY+++ Y+NY NN+
Sbjct: 87  NNYNYSNYNNYNNNN 101


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +3

Query: 693 HNYHFNFYSNYINNS 737
           +NY+++ Y+NY NN+
Sbjct: 87  NNYNYSNYNNYNNNN 101


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 680 LVPVLLNNVINKCPAIRLAVNRT 612
           L+P +LNN  N+C + ++ +  T
Sbjct: 56  LLPEVLNNHCNRCTSRQIGIANT 78


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 693 HNYHFNFYSNYINN 734
           +NY+++ Y+NY NN
Sbjct: 87  NNYNYSNYNNYNNN 100


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 531 TRNTLYFNTIYSNY*NHQKYYS 596
           +  T++ N  Y+NY N + YY+
Sbjct: 308 SNKTIHNNNNYNNYNNKKLYYN 329


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 519 SYNSTRNTLYFNTIYSNY*NHQKYYSTWNFSST 617
           +Y+S  NTL +  + SN   + K+ +  N SST
Sbjct: 300 AYSSLENTLKYYEVGSNVPFNFKFITDANSSST 332


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 693 HNYHFNFYSNYINNS 737
           +NY ++ Y+NY NN+
Sbjct: 87  NNYKYSNYNNYNNNN 101


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 693 HNYHFNFYSNYINNS 737
           +NY ++ Y+NY NN+
Sbjct: 87  NNYKYSNYNNYNNNN 101


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 693 HNYHFNFYSNYINNS 737
           +NY ++ Y+NY NN+
Sbjct: 87  NNYKYSNYNNYNNNN 101


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 693 HNYHFNFYSNYINNS 737
           +NY ++ Y+NY NN+
Sbjct: 87  NNYKYSNYNNYNNNN 101


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 693 HNYHFNFYSNYINN 734
           +NY ++ Y+NY NN
Sbjct: 87  NNYKYSNYNNYNNN 100


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 693 HNYHFNFYSNYINN 734
           +NY ++ Y+NY NN
Sbjct: 87  NNYKYSNYNNYNNN 100


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 693 HNYHFNFYSNYINN 734
           +NY ++ Y+NY NN
Sbjct: 87  NNYKYSNYNNYNNN 100


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 693 HNYHFNFYSNYINN 734
           +NY ++ Y+NY NN
Sbjct: 87  NNYKYSNYNNYNNN 100


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 693 HNYHFNFYSNYINN 734
           +NY ++ Y+NY NN
Sbjct: 87  NNYKYSNYNNYNNN 100


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 693 HNYHFNFYSNYINN 734
           +NY ++ Y+NY NN
Sbjct: 87  NNYKYSNYNNYNNN 100


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 693 HNYHFNFYSNYINN 734
           +NY ++ Y+NY NN
Sbjct: 87  NNYKYSNYNNYNNN 100


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 693 HNYHFNFYSNYINN 734
           +NY ++ Y+NY NN
Sbjct: 87  NNYKYSNYNNYNNN 100


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 693 HNYHFNFYSNYINN 734
           +NY ++ Y+NY NN
Sbjct: 87  NNYKYSNYNNYNNN 100


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 693 HNYHFNFYSNYINN 734
           +NY ++ Y+NY NN
Sbjct: 320 NNYKYSNYNNYNNN 333


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 519 SYNSTRNTLYFNTIYSNY 572
           S+  T N  YF+  Y NY
Sbjct: 209 SWRITHNFFYFDPRYGNY 226


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,909
Number of Sequences: 438
Number of extensions: 2711
Number of successful extensions: 40
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)