Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120184.Seq
         (709 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131510-1|BAD18654.1|  465|Homo sapiens protein ( Homo sapiens ...    31   3.1  
AK127271-1|BAC86910.1| 1091|Homo sapiens protein ( Homo sapiens ...    30   7.1  
BC009447-1|AAH09447.1|  184|Homo sapiens family with sequence si...    30   9.3  
AL732414-6|CAH73704.1|  184|Homo sapiens novel protein protein.        30   9.3  

>AK131510-1|BAD18654.1|  465|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16728 fis, clone UTERU3015412. ).
          Length = 465

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 509 SFISRKKWPACVS-WICRCCPNCGV*ARPWRRGGDSW 616
           ++ S  + P C + W+    P C     PW RGGDSW
Sbjct: 13  TWASWTRCPGCTTCWLAPTPPRCW--PSPWSRGGDSW 47


>AK127271-1|BAC86910.1| 1091|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45338 fis, clone BRHIP3008082. ).
          Length = 1091

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
 Frame = +3

Query: 15  SEILASRNNNKDEANTVIDKGKDSENITKENESHQMQLMKDMNNHEMLIYE--LQTMRSQ 188
           S++ A   N   E  T +    +   ++K +      L    N  +M++ E  LQ  R  
Sbjct: 421 SKVSAKEVNLSKEVRTDVQYKNNKSYVSKISSDCDDILHLVTNQSQMIVKEISLQNARHI 480

Query: 189 SDVPQSFETKDIERNGHCDS 248
           S V QS+E+   E N  CD+
Sbjct: 481 SLVDQSYESSSSETNFDCDA 500


>BC009447-1|AAH09447.1|  184|Homo sapiens family with sequence
           similarity 89, member A protein.
          Length = 184

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +2

Query: 374 AISTMSLQGLPPLPKSLSG 430
           A+  + + GLPPLPKSLSG
Sbjct: 15  AVRGLRVDGLPPLPKSLSG 33


>AL732414-6|CAH73704.1|  184|Homo sapiens novel protein protein.
          Length = 184

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +2

Query: 374 AISTMSLQGLPPLPKSLSG 430
           A+  + + GLPPLPKSLSG
Sbjct: 15  AVRGLRVDGLPPLPKSLSG 33


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,898,410
Number of Sequences: 237096
Number of extensions: 1613284
Number of successful extensions: 5590
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5523
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)