Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120177.Seq
(785 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.60
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 2.4
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 3.2
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 23 4.3
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 23 4.3
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 23 4.3
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 22 7.4
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 22 7.4
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 7.4
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 7.4
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.60
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 322 NTQNGISKLLAKTTIW 275
NT+NG+ LL++T IW
Sbjct: 229 NTKNGMKTLLSETDIW 244
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.4 bits (48), Expect = 2.4
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 158 VLLVAMIPLTPLFSRYKDSYLLYSFRLIDLLRVLNRRTLPNCCLRKQLTYTILR 319
+LL +IP T L YLL++ L+ L V+ L N R +T+ + R
Sbjct: 283 LLLAEIIPPTSLTVPLLGKYLLFTMVLVTLSVVVTIAVL-NVNFRSPVTHRMAR 335
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 467 PRVLLTRLPPYGTPALSQSH 526
PR+L+ R PY TP ++
Sbjct: 359 PRLLMMRRTPYSTPEYDDTY 378
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 22.6 bits (46), Expect = 4.3
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -3
Query: 195 KSGVSGIMATSKTIVLYLCQAPATASLYVSAD----TDADEPIIYFENITECL 49
+ G+SG+ + T LY +T+ YV+ + +D + I++E + L
Sbjct: 250 QDGISGMALSPMTNNLYYSPVASTSLYYVNTEQFRTSDYQQNDIHYEGVQNIL 302
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.6 bits (46), Expect = 4.3
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -3
Query: 195 KSGVSGIMATSKTIVLYLCQAPATASLYVSAD----TDADEPIIYFENITECL 49
+ G+SG+ + T LY +T+ YV+ + +D + I++E + L
Sbjct: 250 QDGISGMALSPMTNNLYYSPVASTSLYYVNTEQFRTSDYQQNDIHYEGVQNIL 302
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.6 bits (46), Expect = 4.3
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -3
Query: 195 KSGVSGIMATSKTIVLYLCQAPATASLYVSAD----TDADEPIIYFENITECL 49
+ G+SG+ + T LY +T+ YV+ + +D + I++E + L
Sbjct: 250 QDGISGMALSPMTNNLYYSPVASTSLYYVNTEQFRTSDYQQNDIHYEGVQNIL 302
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 21.8 bits (44), Expect = 7.4
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +1
Query: 289 SQATYLYHFACLMKYKDIQKYEVQQLIEWAINASPD 396
S T + C K +IQK + +L EW P+
Sbjct: 65 SHITEAFQTQC-KKCTEIQKQNLDKLAEWFTTNEPE 99
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 21.8 bits (44), Expect = 7.4
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +1
Query: 289 SQATYLYHFACLMKYKDIQKYEVQQLIEWAINASPD 396
S T + C K +IQK + +L EW P+
Sbjct: 65 SHITEAFQTQC-KKCTEIQKQNLDKLAEWFTTNEPE 99
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 254 VLNRRTLPNCCLRKQLTY 307
VLN LPN C +++ Y
Sbjct: 89 VLNATVLPNSCYQERYEY 106
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 254 VLNRRTLPNCCLRKQLTY 307
VLN LPN C +++ Y
Sbjct: 89 VLNATVLPNSCYQERYEY 106
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,148
Number of Sequences: 438
Number of extensions: 4423
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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