Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120174.Seq
         (817 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3561|AAN11140.1|  600|Drosophila melanogaster CG31601-P...    30   4.4  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   5.8  
AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA...    29   7.6  

>AE014134-3561|AAN11140.1|  600|Drosophila melanogaster CG31601-PA
           protein.
          Length = 600

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -2

Query: 255 LEHGAGFGRHAQTSICTCRRRGHVLPVHNLHILNCWRCPWPQ 130
           LE G  FG   + S  T ++  + +P+   HI NC  C W Q
Sbjct: 238 LEDGELFGEDNEVSSNTIKKEDNRMPICRYHIRNC--CIWGQ 277


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -1

Query: 649  CAMSAMRLASCAVFRRAFSQSCRAVS-ASRRATIISLANKMSDRLLPPIC 503
            C +   + ASCAV  R + Q CR V   S       + N  SDR   P C
Sbjct: 2148 CNLPCTKTASCAVGERCYQQVCRKVCYTSNNCLAGEICN--SDRTCQPGC 2195


>AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA
           protein.
          Length = 1860

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -2

Query: 294 GCKYSGSPCFATLLEHGAGFGRHAQTSICTCRRRGHVLPVHNLHILNCWRC 142
           G  YS S C A +     G   +A  S  T R R  +LP+ +L  +    C
Sbjct: 801 GKSYSSSECLADVTMPSYGGNSYASRSKSTSRSRKSMLPIRDLSEMRTDEC 851


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,468,186
Number of Sequences: 53049
Number of extensions: 893476
Number of successful extensions: 2649
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2642
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)