Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120171.Seq
         (838 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119636-1|AAM50290.1|  620|Drosophila melanogaster RE43020p pro...    30   4.5  
AE014296-619|AAF47751.2|  594|Drosophila melanogaster CG12017-PA...    30   4.5  

>AY119636-1|AAM50290.1|  620|Drosophila melanogaster RE43020p
           protein.
          Length = 620

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
 Frame = +1

Query: 247 RRYKLSQMYIAEKPLSIDDIVKEGSN---KVGTNSI--FLGTVYDYGVKSPNAASTSSNV 411
           R Y  S++ + EKP +I   ++ G+N   K    S+  FLG  Y+Y +++P AA   S  
Sbjct: 110 RGYSTSELPVKEKPSTILKKIEIGTNYMKKYLAESMDGFLGREYEY-LQTPKAAEDDSET 168

Query: 412 TMTRGTANFD 441
             +  +A  D
Sbjct: 169 DQSGNSAEDD 178


>AE014296-619|AAF47751.2|  594|Drosophila melanogaster CG12017-PA
           protein.
          Length = 594

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
 Frame = +1

Query: 247 RRYKLSQMYIAEKPLSIDDIVKEGSN---KVGTNSI--FLGTVYDYGVKSPNAASTSSNV 411
           R Y  S++ + EKP +I   ++ G+N   K    S+  FLG  Y+Y +++P AA   S  
Sbjct: 110 RGYSTSELPVKEKPSTILKKIEIGTNYMKKYLAESMDGFLGREYEY-LQTPKAAEDDSET 168

Query: 412 TMTRGTANFD 441
             +  +A  D
Sbjct: 169 DQSGNSAEDD 178


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,887,965
Number of Sequences: 53049
Number of extensions: 790226
Number of successful extensions: 1861
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1861
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)