Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120170.Seq
         (771 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    25   2.6  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   3.4  

>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 14/55 (25%), Positives = 31/55 (56%)
 Frame = +1

Query: 544 KEHNKIIQYLYQTIHKIEYVDMLMDKFNDKRLFLTELRDDVAREPDVQFEESDNI 708
           K+H+ I    Y+ +H+++Y++M +++   K   +T L   V  E D +  ++D +
Sbjct: 341 KQHSSIT---YEAVHEMKYIEMCINESMRKYPPITTLTRRV--EKDYRVPDTDKV 390


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +1

Query: 541 FKEHNKIIQYLYQTIHKIEYVDMLMD-KFNDKRLFLTELRDDVAREPDVQF 690
           FK H  + + L   + ++ Y   L+  +    +L +TELRDD    PD  F
Sbjct: 573 FKIHG-LAKTLPANLGQVTYKTSLLHLQPRQMKLVITELRDDFPTGPDPNF 622


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 767,884
Number of Sequences: 2352
Number of extensions: 14780
Number of successful extensions: 24
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)