Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120168.Seq
(679 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0533 + 3868230-3868564,3869040-3869098,3869187-3869225,386... 129 2e-30
06_03_1052 - 27217792-27217846,27218025-27218114,27218191-272182... 125 4e-29
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 109 3e-24
08_01_0179 + 1519141-1519144,1519278-1519301,1519417-1519517,151... 101 5e-22
02_04_0507 + 23546911-23546953,23547011-23547111,23547695-235478... 94 1e-19
04_04_0120 + 22911863-22911904,22912002-22912112,22912212-229127... 80 2e-15
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 70 1e-12
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 31 1.1
07_03_1666 + 28482262-28482385,28482475-28482992 29 3.4
04_04_0678 + 27207340-27207447,27207555-27207668,27209111-272093... 29 3.4
08_01_0055 - 375343-375567,375672-377540 29 4.5
04_01_0279 + 3743025-3745169 29 4.5
12_01_0935 - 9277421-9277584,9277908-9278111,9280742-9280982,928... 28 6.0
12_01_0941 - 9316051-9316056,9316747-9317082 28 7.9
12_01_0937 - 9289999-9290046,9290123-9290458 28 7.9
11_06_0023 - 19325966-19326046,19326132-19326248,19326635-193267... 28 7.9
08_02_1628 + 28363476-28363517,28363624-28363791,28363863-283639... 28 7.9
02_02_0015 + 6109552-6109650,6110006-6110078,6111937-6111998,611... 28 7.9
>02_01_0533 +
3868230-3868564,3869040-3869098,3869187-3869225,
3869629-3869729,3870288-3870400,3870976-3871075,
3871170-3871316,3871442-3871502,3871616-3871713,
3871786-3871928,3872221-3872304,3872389-3872478,
3872574-3872628
Length = 474
Score = 129 bits (311), Expect = 2e-30
Identities = 84/212 (39%), Positives = 107/212 (50%), Gaps = 5/212 (2%)
Frame = +1
Query: 55 SKIGINGFGRIGRLVLR-ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVE-V 228
+K+GINGFGRIGRLVLR A+ +VVA+NDPFI YM Y+FKYDSTHG FKGS++ V
Sbjct: 139 TKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGSIKVV 198
Query: 229 QDGFLVVNGTKLPFSQKGTLRPFHGEKLGLNML*SLLVSLPLQIKHLLTWREVLKKLLYQ 408
D L +NG K+ + K G + K + KK++
Sbjct: 199 DDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVVIS 258
Query: 409 LPVLMPPCLLWVLT*KLMTP---F*GHLKCFLHHKLFAPLAKVIQDNFEIFKGLMXXXXX 579
P P + + K P + C + APLAKV+ + F I +GLM
Sbjct: 259 APSADAPMFVVGVNEKSYDPKMNVVSNASCTTN--CLAPLAKVVHEEFGIVEGLMTTVHA 316
Query: 580 XXXXXXXXDGLSGKLWRDGRGAQQNIIPASTG 675
DG S K WR GRGA QNIIP+STG
Sbjct: 317 TTATQKTVDGPSMKDWRGGRGAAQNIIPSSTG 348
Score = 120 bits (289), Expect = 1e-27
Identities = 54/70 (77%), Positives = 63/70 (90%)
Frame = +3
Query: 258 KIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFV 437
K+ + S+RDP IPWG GAEYVVES+GVFTTT+KASAHL+GGAKKV+ISAPSADAPMFV
Sbjct: 209 KVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVVISAPSADAPMFV 268
Query: 438 VGVNLEAYDP 467
VGVN ++YDP
Sbjct: 269 VGVNEKSYDP 278
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 452 RSL*PPFKVISNASCTTNCLPHLQRL 529
+S P V+SNASCTTNCL L ++
Sbjct: 274 KSYDPKMNVVSNASCTTNCLAPLAKV 299
>06_03_1052 -
27217792-27217846,27218025-27218114,27218191-27218274,
27218526-27218668,27218748-27218845,27218959-27219019,
27219184-27219330,27219428-27219527,27219701-27219813,
27220302-27220402,27220614-27220652,27220739-27220797,
27221027-27221088,27221411-27221506
Length = 415
Score = 125 bits (301), Expect = 4e-29
Identities = 79/210 (37%), Positives = 105/210 (50%), Gaps = 3/210 (1%)
Frame = +1
Query: 55 SKIGINGFGRIGRLVLRASIEKG-AQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 231
+K+GINGFGRIGRLVLR + + +VVA+NDPFI YM Y+FKYDSTHG FKG+++V
Sbjct: 80 TKVGINGFGRIGRLVLRIATNRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGTIKVV 139
Query: 232 D-GFLVVNGTKLPFSQKGTLRPFHGEKLGLNML*SLLVSLPLQIKHLLTWREVLKKLLYQ 408
D L +NG K+ + K G + K + +K++
Sbjct: 140 DESTLEINGKKISVTSKRDPSDIPWGNFGAEYVVESSGVFTTTEKASAHLKGGARKVVIS 199
Query: 409 LPVLMPPCLLWVLT*KLMTPF*GHL-KCFLHHKLFAPLAKVIQDNFEIFKGLMXXXXXXX 585
P P + + K P + APLAK++ + F I +GLM
Sbjct: 200 APSADAPMFVVGVNEKNYNPSMNVVSNASCTTNCLAPLAKIVHEEFGIAEGLMTTVHATT 259
Query: 586 XXXXXXDGLSGKLWRDGRGAQQNIIPASTG 675
DG S K WR GRGA QNIIP+STG
Sbjct: 260 ATQKTVDGPSMKDWRGGRGASQNIIPSSTG 289
Score = 117 bits (282), Expect = 8e-27
Identities = 54/70 (77%), Positives = 63/70 (90%)
Frame = +3
Query: 258 KIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFV 437
KI+V S+RDP IPWG GAEYVVES+GVFTTT+KASAHL+GGA+KV+ISAPSADAPMFV
Sbjct: 150 KISVTSKRDPSDIPWGNFGAEYVVESSGVFTTTEKASAHLKGGARKVVISAPSADAPMFV 209
Query: 438 VGVNLEAYDP 467
VGVN + Y+P
Sbjct: 210 VGVNEKNYNP 219
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 464 PPFKVISNASCTTNCLPHLQRL 529
P V+SNASCTTNCL L ++
Sbjct: 219 PSMNVVSNASCTTNCLAPLAKI 240
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 109 bits (261), Expect = 3e-24
Identities = 49/70 (70%), Positives = 59/70 (84%)
Frame = +3
Query: 258 KIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFV 437
++ VF R+P+ IPWG+ GAE+VVESTGVFT DKA+AHL+GGAKKV+ISAPS DAPMFV
Sbjct: 123 EVTVFGCRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFV 182
Query: 438 VGVNLEAYDP 467
VGVN + Y P
Sbjct: 183 VGVNEKEYKP 192
Score = 57.6 bits (133), Expect = 9e-09
Identities = 54/175 (30%), Positives = 75/175 (42%), Gaps = 6/175 (3%)
Frame = +1
Query: 169 MVYLFKYDSTHGRFKG-SVEVQDGFLVVNGTK--LPFSQKGTLRPFHGEKLGLNML*SLL 339
+ Y+FKYD+ HG++K V+V+D ++ G K F + GE G +
Sbjct: 91 VTYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVTVFGCRNPEEIPWGET-GAEFVVEST 149
Query: 340 VSLPLQIKHLLTWREVLKKLLYQLPVLMPPCLLWVLT*KLMTP---F*GHLKCFLHHKLF 510
+ K + KK++ P P + + K P + C +
Sbjct: 150 GVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTN--CL 207
Query: 511 APLAKVIQDNFEIFKGLMXXXXXXXXXXXXXDGLSGKLWRDGRGAQQNIIPASTG 675
APLAKVI D F I +GLM DG S K WR GR A NIIP+STG
Sbjct: 208 APLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTG 262
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/43 (60%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Frame = +1
Query: 58 KIGINGFGRIGRLVLRASIEK-GAQVVAINDPFIGLDYMVYLF 183
KIGINGFGRIGRLV R +++ ++VA+NDPFI DYM+ F
Sbjct: 5 KIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMICEF 47
Score = 32.3 bits (70), Expect = 0.37
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 464 PPFKVISNASCTTNCLPHLQRL 529
P ++SNASCTTNCL L ++
Sbjct: 192 PDIDIVSNASCTTNCLAPLAKV 213
>08_01_0179 +
1519141-1519144,1519278-1519301,1519417-1519517,
1519805-1519920,1519944-1520112,1520713-1520859,
1520943-1521003,1521086-1521183,1521608-1521750,
1521980-1522063,1522191-1522280,1522375-1522420
Length = 360
Score = 101 bits (242), Expect = 5e-22
Identities = 46/62 (74%), Positives = 53/62 (85%)
Frame = +3
Query: 276 ERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFVVGVNLE 455
ER+P IPW +AGAEYVVESTGVFT +KA+AHL+GGAKKV+ISAPS DAPMFV GVN +
Sbjct: 104 ERNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNED 163
Query: 456 AY 461
Y
Sbjct: 164 KY 165
Score = 81.4 bits (192), Expect = 6e-16
Identities = 37/70 (52%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
Frame = +1
Query: 58 KIGINGFGRIGRLVLRASIE-KGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGS-VEVQ 231
KIGINGFGRIGRLV R +++ + ++VA+NDPFI DYM Y+FKYD+ HG++K S ++++
Sbjct: 5 KIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIK 64
Query: 232 DGFLVVNGTK 261
D ++ G K
Sbjct: 65 DSKTLLLGEK 74
Score = 57.6 bits (133), Expect = 9e-09
Identities = 30/55 (54%), Positives = 32/55 (58%)
Frame = +1
Query: 511 APLAKVIQDNFEIFKGLMXXXXXXXXXXXXXDGLSGKLWRDGRGAQQNIIPASTG 675
APLAKVI DNF I +GLM DG S K WR GR A NIIP+STG
Sbjct: 183 APLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTG 237
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 476 VISNASCTTNCLPHLQRL 529
++SNASCTTNCL L ++
Sbjct: 171 IVSNASCTTNCLAPLAKV 188
>02_04_0507 +
23546911-23546953,23547011-23547111,23547695-23547810,
23547897-23547996,23548027-23548215,23548303-23548363,
23548469-23548566,23548943-23549085,23549228-23549311,
23549423-23549512,23549599-23549644
Length = 356
Score = 93.9 bits (223), Expect = 1e-19
Identities = 50/82 (60%), Positives = 58/82 (70%), Gaps = 14/82 (17%)
Frame = +3
Query: 258 KIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHL--------------EGGAKK 395
++AVF R+P+ IPW AGAEYVVESTGVFT DKA+AHL +GGAKK
Sbjct: 80 EVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHLKGQAVDLFSIIFHMQGGAKK 139
Query: 396 VIISAPSADAPMFVVGVNLEAY 461
V+ISAPS DAPMFVVGVN + Y
Sbjct: 140 VVISAPSKDAPMFVVGVNEKEY 161
Score = 72.1 bits (169), Expect = 4e-13
Identities = 33/65 (50%), Positives = 49/65 (75%), Gaps = 2/65 (3%)
Frame = +1
Query: 73 GFGRIGRLVLRASIE-KGAQVVAINDPFIGLDYMVYLFKYDSTHGRFK-GSVEVQDGFLV 246
GFGRIGRLV R +++ + ++VA+NDPFI +YM Y+FKYD+ HG++K V+V+D +
Sbjct: 15 GFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVKVKDSKTL 74
Query: 247 VNGTK 261
+ GTK
Sbjct: 75 IFGTK 79
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/55 (52%), Positives = 31/55 (56%)
Frame = +1
Query: 511 APLAKVIQDNFEIFKGLMXXXXXXXXXXXXXDGLSGKLWRDGRGAQQNIIPASTG 675
APLAKVI D F I +GLM DG S K WR GR A NIIP+STG
Sbjct: 179 APLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSMKDWRGGRAASFNIIPSSTG 233
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 476 VISNASCTTNCLPHLQRL 529
++SNASCTTNCL L ++
Sbjct: 167 IVSNASCTTNCLAPLAKV 184
>04_04_0120 +
22911863-22911904,22912002-22912112,22912212-22912764,
22912852-22913354
Length = 402
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = +3
Query: 261 IAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAP-SADAPMFV 437
I V S+R+P +PWG+ G + V+E TGVF D A H++ GAKKV+I+AP D P +V
Sbjct: 140 IKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGKGDIPTYV 199
Query: 438 VGVNLEAYDP 467
VGVN + Y P
Sbjct: 200 VGVNADQYSP 209
Score = 54.4 bits (125), Expect = 8e-08
Identities = 64/218 (29%), Positives = 92/218 (42%), Gaps = 12/218 (5%)
Frame = +1
Query: 58 KIGINGFGRIGRLVLRASIEKG----AQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVE 225
K+ INGFGRIGR LR +G V+AIND G+ +L KYDST G F V+
Sbjct: 68 KVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVK 126
Query: 226 -VQDGFLVVNGTKLPFSQKGTLRPFHGEKLGLNML---*SLLVSLPLQIKHLLTWREVLK 393
V D + V+G + +LG++++ + V KH+ + K
Sbjct: 127 PVGDNAISVDGKVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHI---QAGAK 183
Query: 394 KLLYQLPVL--MPPCLLWVLT*KLM--TPF*GHLKCFLHHKLFAPLAKVIQDNFEIFKGL 561
K+L P +P ++ V + P + C + AP K++ F I KG
Sbjct: 184 KVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTN--CLAPFVKILDQKFGIIKGT 241
Query: 562 MXXXXXXXXXXXXXDGLSGKLWRDGRGAQQNIIPASTG 675
M D S + R R A NI+P STG
Sbjct: 242 MTTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTG 278
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 464 PPFKVISNASCTTNCL 511
P +ISNASCTTNCL
Sbjct: 209 PDEPIISNASCTTNCL 224
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Frame = +3
Query: 261 IAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPS--ADAPMF 434
I V S RDP +PW + G + V+E TGVF A H++ GAKKVII+AP+ AD P +
Sbjct: 150 IKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTY 209
Query: 435 VVGVN 449
V+GVN
Sbjct: 210 VLGVN 214
Score = 53.6 bits (123), Expect = 1e-07
Identities = 64/224 (28%), Positives = 95/224 (42%), Gaps = 13/224 (5%)
Frame = +1
Query: 43 ADNMSKIGINGFGRIGRLVLRASIEK---GAQVVAINDPFIGLDYMVYLFKYDSTHGRFK 213
A+ K+ INGFGRIGR LR E+ +VV +ND G+ +L KYDS G FK
Sbjct: 74 AEAKLKVAINGFGRIGRNFLRCWHERENSPLEVVVVNDSG-GVRNASHLLKYDSMLGTFK 132
Query: 214 GSVE-VQDGFLVVNGTKLPFSQKGTLRPFHGEKLGLNML---*SLLVSLPLQIKHLLTWR 381
V+ V D + V+G + +LG++++ + V P KH+ +
Sbjct: 133 ADVKIVDDQTISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHI---Q 189
Query: 382 EVLKKLLYQLPVL---MPPCLLWVLT*KL---MTPF*GHLKCFLHHKLFAPLAKVIQDNF 543
KK++ P +P +L V + + C + AP K++ + F
Sbjct: 190 AGAKKVIITAPAKGADIPTYVLGVNEGDYSHEVANIISNASCTTN--CLAPFVKILDEEF 247
Query: 544 EIFKGLMXXXXXXXXXXXXXDGLSGKLWRDGRGAQQNIIPASTG 675
I KG M D S + R R A NI+P STG
Sbjct: 248 GIVKGTMTTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTG 290
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 476 VISNASCTTNCL 511
+ISNASCTTNCL
Sbjct: 225 IISNASCTTNCL 236
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 255 NKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDK 362
NK+ D + + WGK E + E G+ T+T+K
Sbjct: 446 NKVDEMKSGDRQHLWWGKRNVEQITEKLGLLTSTEK 481
>07_03_1666 + 28482262-28482385,28482475-28482992
Length = 213
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -1
Query: 448 LTPTTNMGASALGADIITFLAPPSK*ADALSVVVKTPVDSTTYSAPAFPHG 296
+T + MG+ G+ + + PP + S+ TT AP PHG
Sbjct: 81 VTSSEMMGSLMSGSGRVAVITPPPAASGGASLPAAAAAGGTTLVAPVVPHG 131
>04_04_0678 +
27207340-27207447,27207555-27207668,27209111-27209332,
27209407-27209481,27209569-27209685,27210145-27210395,
27210686-27210761,27210862-27210948,27211037-27211222
Length = 411
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 67 INGFGRIGRLVLRASIEKGAQVVAIND 147
I GFG +G R EKG +V+A+ D
Sbjct: 211 IQGFGNVGSWAARIIHEKGGKVIALGD 237
>08_01_0055 - 375343-375567,375672-377540
Length = 697
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 546 FKVILDNLCKWGKQFVVQEAFEMTLKGGHK 457
+ ++D LCK GK ++ F+ +K GHK
Sbjct: 315 YTALMDYLCKNGKSTEARKIFDSLVKRGHK 344
>04_01_0279 + 3743025-3745169
Length = 714
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 98 CSVLLLKRELKWSL*MTLSSVLTIWFIFS-SMIPPMAVLRAVLRFRMD 238
C V+ ++ L + + T ++V+ WF F+ ++ P+AV A+ FR++
Sbjct: 240 CRVVEMELSLMYDILYTKAAVMHTWFGFAIRVVSPLAVAAALGLFRLE 287
>12_01_0935 -
9277421-9277584,9277908-9278111,9280742-9280982,
9282165-9282494
Length = 312
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 67 INGFGRIGRLVLRASIEKGAQVVAINDPFIGLD 165
+ G G IGR ++ AS+ +G + P IGLD
Sbjct: 9 VGGTGYIGRRIVAASLAEGHPTFVLLRPEIGLD 41
>12_01_0941 - 9316051-9316056,9316747-9317082
Length = 113
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 67 INGFGRIGRLVLRASIEKGAQVVAINDPFIGL--DYMVYLFKYDSTHGR-FKGSVEVQDG 237
+ G G IGR ++ AS+ +G + P IGL D + L + + R + S++ DG
Sbjct: 11 VGGSGYIGRRIVAASLAEGHPTFVLLRPEIGLNIDKLQILLAFKAQGARLLEASLDDHDG 70
Query: 238 FL 243
+
Sbjct: 71 LV 72
>12_01_0937 - 9289999-9290046,9290123-9290458
Length = 127
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 67 INGFGRIGRLVLRASIEKGAQVVAINDPFIGLD 165
+ G G IGR ++ AS+ G + P IGLD
Sbjct: 11 VGGTGHIGRRIVAASLAAGHPTSVLLRPEIGLD 43
>11_06_0023 -
19325966-19326046,19326132-19326248,19326635-19326703,
19326922-19327119,19327388-19327591,19327688-19327828,
19328416-19328625,19329330-19329944
Length = 544
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3
Query: 504 TVCPTCKGYPG 536
TVCPTC G+PG
Sbjct: 97 TVCPTCMGHPG 107
>08_02_1628 +
28363476-28363517,28363624-28363791,28363863-28363937,
28364018-28364070,28364559-28364709,28365079-28365261,
28366110-28366236,28366731-28366831,28367156-28367294,
28367359-28367420,28367702-28367754,28368266-28368290
Length = 392
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 457 ASRLTPTTNMGASALGADIITFLAPPSK*ADALSVVVKTPV 335
+ L TT G + +GA + F++ PSK SVVV V
Sbjct: 327 SEELIDTTGAGDAFIGAVLYAFVSGPSKFCSVKSVVVNLAV 367
>02_02_0015 +
6109552-6109650,6110006-6110078,6111937-6111998,
6112315-6112376,6112463-6112556,6112673-6113227,
6113379-6113870,6113967-6114137,6115713-6115817,
6115903-6116052,6116372-6116498,6116585-6116648,
6117147-6117203,6117423-6117555,6117660-6117746
Length = 776
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = -1
Query: 445 TPTTNMGASALGADIITFLAPPSK*ADALSVVVKTPVDSTTYSAPAFPHGMALGSLSEKT 266
T + ++G L ADI T L PP + +TP Y+ P + M + + +
Sbjct: 524 TDSRSIGRKELPADIFTSLYPPG--PQTIGGWQRTPQFGMGYAMP-YQTAMGMQAYPQMA 580
Query: 265 AILFR*QQGIHPEPQH 218
QQ ++P+ QH
Sbjct: 581 FAQPAYQQPVYPQQQH 596
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,351,071
Number of Sequences: 37544
Number of extensions: 441789
Number of successful extensions: 1073
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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