Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120168.Seq
(679 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenas... 127 6e-30
At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenas... 127 8e-30
At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenas... 106 2e-23
At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenas... 106 2e-23
At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenas... 79 4e-15
At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenas... 76 2e-14
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 70 2e-12
At5g18170.1 68418.m02133 glutamate dehydrogenase 1 (GDH1) identi... 29 2.8
At5g07440.1 68418.m00851 glutamate dehydrogenase 2 (GDH2) identi... 29 2.8
At2g44030.1 68415.m05474 kelch repeat-containing F-box family pr... 29 2.8
At4g01330.1 68417.m00173 protein kinase family protein contains ... 29 3.7
At3g03910.1 68416.m00405 glutamate dehydrogenase, putative simil... 29 3.7
At1g05690.1 68414.m00590 TAZ zinc finger family protein / BTB/PO... 29 3.7
At1g21440.1 68414.m02681 mutase family protein similar to carbox... 28 4.9
At3g48470.1 68416.m05291 expressed protein 28 6.5
At3g05360.1 68416.m00584 disease resistance family protein / LRR... 28 6.5
At3g63330.1 68416.m07125 protein kinase family protein contains ... 27 8.6
>At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 422
Score = 127 bits (307), Expect = 6e-30
Identities = 85/215 (39%), Positives = 109/215 (50%), Gaps = 8/215 (3%)
Frame = +1
Query: 55 SKIGINGFGRIGRLVLR-ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEV- 228
+K+GINGFGRIGRLVLR A+ +VVA+NDPFI YM Y+ KYDSTHG FKGS+ V
Sbjct: 87 TKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMLKYDSTHGNFKGSINVI 146
Query: 229 QDGFLVVNGTKLPFSQKGTLRPFHGEKLGLNML---*SLLVSLPLQIKHLLTWREVLKKL 399
D L +NG K+ K LG + + + +L HL + KK+
Sbjct: 147 DDSTLEINGKKVNVVSKRDPSEIPWADLGADYVVESSGVFTTLSKAASHL---KGGAKKV 203
Query: 400 LYQLPVLMPPCLLWVLT*KLMTP---F*GHLKCFLHHKLFAPLAKVIQDNFEIFKGLMXX 570
+ P P + + P + C + APLAKV+ + F I +GLM
Sbjct: 204 IISAPSADAPMFVVGVNEHTYQPNMDIVSNASCTTN--CLAPLAKVVHEEFGILEGLMTT 261
Query: 571 XXXXXXXXXXXDGLSGKLWRDGRGAQQNIIPASTG 675
DG S K WR GRGA QNIIP+STG
Sbjct: 262 VHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTG 296
Score = 109 bits (261), Expect = 2e-24
Identities = 50/70 (71%), Positives = 57/70 (81%)
Frame = +3
Query: 258 KIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFV 437
K+ V S+RDP IPW GA+YVVES+GVFTT KA++HL+GGAKKVIISAPSADAPMFV
Sbjct: 157 KVNVVSKRDPSEIPWADLGADYVVESSGVFTTLSKAASHLKGGAKKVIISAPSADAPMFV 216
Query: 438 VGVNLEAYDP 467
VGVN Y P
Sbjct: 217 VGVNEHTYQP 226
Score = 31.9 bits (69), Expect = 0.40
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 464 PPFKVISNASCTTNCLPHLQRL 529
P ++SNASCTTNCL L ++
Sbjct: 226 PNMDIVSNASCTTNCLAPLAKV 247
>At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 420
Score = 127 bits (306), Expect = 8e-30
Identities = 83/215 (38%), Positives = 110/215 (51%), Gaps = 8/215 (3%)
Frame = +1
Query: 55 SKIGINGFGRIGRLVLR-ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEV- 228
+K+GINGFGRIGRLVLR A+ +VVA+NDPFI YM Y+FKYDSTHG +KG++ V
Sbjct: 85 TKVGINGFGRIGRLVLRIATFRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGNYKGTINVI 144
Query: 229 QDGFLVVNGTKLPFSQKGTLRPFHGEKLGLNML---*SLLVSLPLQIKHLLTWREVLKKL 399
D L +NG ++ K LG + + ++ HL + KK+
Sbjct: 145 DDSTLEINGKQVKVVSKRDPAEIPWADLGAEYVVESSGVFTTVGQASSHL---KGGAKKV 201
Query: 400 LYQLPVLMPPCLLWVLT*KLMTP---F*GHLKCFLHHKLFAPLAKVIQDNFEIFKGLMXX 570
+ P P + + K P + C + APLAKV+ + F I +GLM
Sbjct: 202 IISAPSADAPMFVVGVNEKTYLPNMDIVSNASCTTN--CLAPLAKVVHEEFGILEGLMTT 259
Query: 571 XXXXXXXXXXXDGLSGKLWRDGRGAQQNIIPASTG 675
DG S K WR GRGA QNIIP+STG
Sbjct: 260 VHATTATQKTVDGPSMKDWRGGRGASQNIIPSSTG 294
Score = 107 bits (256), Expect = 9e-24
Identities = 50/70 (71%), Positives = 58/70 (82%)
Frame = +3
Query: 258 KIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFV 437
++ V S+RDP IPW GAEYVVES+GVFTT +AS+HL+GGAKKVIISAPSADAPMFV
Sbjct: 155 QVKVVSKRDPAEIPWADLGAEYVVESSGVFTTVGQASSHLKGGAKKVIISAPSADAPMFV 214
Query: 438 VGVNLEAYDP 467
VGVN + Y P
Sbjct: 215 VGVNEKTYLP 224
Score = 31.9 bits (69), Expect = 0.40
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 464 PPFKVISNASCTTNCLPHLQRL 529
P ++SNASCTTNCL L ++
Sbjct: 224 PNMDIVSNASCTTNCLAPLAKV 245
>At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenase,
cytosolic (GAPC) / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase identical to
SP|P25858 Glyceraldehyde 3-phosphate dehydrogenase,
cytosolic (EC 1.2.1.12) {Arabidopsis thaliana}
Length = 338
Score = 106 bits (254), Expect = 2e-23
Identities = 77/219 (35%), Positives = 109/219 (49%), Gaps = 7/219 (3%)
Frame = +1
Query: 40 LADNMSKIGINGFGRIGRLVLRASIEKG-AQVVAINDPFIGLDYMVYLFKYDSTHGRFK- 213
+AD +IGINGFGRIGRLV R +++ ++VA+NDPFI +YM Y+FKYDS HG++K
Sbjct: 1 MADKKIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKH 60
Query: 214 GSVEVQDGFLVVNGTKLPFSQKGTLRP--FHGEKLGLNML*SLLVSLPLQIKHLLTWREV 387
++++D ++ G K P + G P + G + + + K +
Sbjct: 61 NELKIKDEKTLLFGEK-PVTVFGIRNPEDIPWAEAGADYVVESTGVFTDKDKAAAHLKGG 119
Query: 388 LKKLLYQLPVLMPPCLLWVLT---*KLMTPF*GHLKCFLHHKLFAPLAKVIQDNFEIFKG 558
KK++ P P + + K + C + APLAKVI D F I +G
Sbjct: 120 AKKVVISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTN--CLAPLAKVINDRFGIVEG 177
Query: 559 LMXXXXXXXXXXXXXDGLSGKLWRDGRGAQQNIIPASTG 675
LM DG S K WR GR A NIIP+STG
Sbjct: 178 LMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTG 216
Score = 105 bits (252), Expect = 3e-23
Identities = 48/67 (71%), Positives = 56/67 (83%)
Frame = +3
Query: 261 IAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFVV 440
+ VF R+P+ IPW +AGA+YVVESTGVFT DKA+AHL+GGAKKV+ISAPS DAPMFVV
Sbjct: 78 VTVFGIRNPEDIPWAEAGADYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVV 137
Query: 441 GVNLEAY 461
GVN Y
Sbjct: 138 GVNEHEY 144
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 476 VISNASCTTNCLPHLQRL 529
++SNASCTTNCL L ++
Sbjct: 150 IVSNASCTTNCLAPLAKV 167
>At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative very
strong similarity to SP|P25858 Glyceraldehyde
3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 338
Score = 106 bits (254), Expect = 2e-23
Identities = 78/219 (35%), Positives = 109/219 (49%), Gaps = 7/219 (3%)
Frame = +1
Query: 40 LADNMSKIGINGFGRIGRLVLRASIEKG-AQVVAINDPFIGLDYMVYLFKYDSTHGRFK- 213
+AD +IGINGFGRIGRLV R +++ ++VA+NDPFI +YM Y+FKYDS HG++K
Sbjct: 1 MADKKIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKH 60
Query: 214 GSVEVQDGFLVVNGTKLPFSQKGTLRP--FHGEKLGLNML*SLLVSLPLQIKHLLTWREV 387
++V+D ++ G K P + G P + G + + + K +
Sbjct: 61 HELKVKDDKTLLFGEK-PVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGG 119
Query: 388 LKKLLYQLPVLMPPCLLWVLT---*KLMTPF*GHLKCFLHHKLFAPLAKVIQDNFEIFKG 558
KK++ P P + + K + C + APLAKVI D F I +G
Sbjct: 120 AKKVVISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTN--CLAPLAKVINDRFGIVEG 177
Query: 559 LMXXXXXXXXXXXXXDGLSGKLWRDGRGAQQNIIPASTG 675
LM DG S K WR GR A NIIP+STG
Sbjct: 178 LMTTVHSITATQKTVDGPSMKDWRGGRAASFNIIPSSTG 216
Score = 106 bits (254), Expect = 2e-23
Identities = 48/67 (71%), Positives = 57/67 (85%)
Frame = +3
Query: 261 IAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFVV 440
+ VF R+P+ IPWG+AGA++VVESTGVFT DKA+AHL+GGAKKV+ISAPS DAPMFVV
Sbjct: 78 VTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVV 137
Query: 441 GVNLEAY 461
GVN Y
Sbjct: 138 GVNEHEY 144
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 476 VISNASCTTNCLPHLQRL 529
++SNASCTTNCL L ++
Sbjct: 150 IVSNASCTTNCLAPLAKV 167
>At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenase,
chloroplast, putative / NADP-dependent
glyceraldehydephosphate dehydrogenase, putative similar
to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A,
chloroplast precursor (EC 1.2.1.13) (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 399
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +3
Query: 261 IAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAP-SADAPMFV 437
I + S+R+P +PWG+ G + V+E TGVF D A HL+ GAKKV+I+AP D P +V
Sbjct: 137 IKIVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYV 196
Query: 438 VGVNLEAY 461
VGVN E Y
Sbjct: 197 VGVNAELY 204
Score = 48.8 bits (111), Expect = 3e-06
Identities = 64/217 (29%), Positives = 88/217 (40%), Gaps = 11/217 (5%)
Frame = +1
Query: 58 KIGINGFGRIGRLVLR---ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEV 228
K+ INGFGRIGR LR + VV IND G+ +L KYDST G F V+
Sbjct: 66 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSTLGIFDADVKP 124
Query: 229 Q-DGFLVVNGTKLPFSQKGTLRPFHGEKLGLNML---*SLLVSLPLQIKHLLTWREVLKK 396
D L V+G + +LG++++ + V KHL + KK
Sbjct: 125 SGDSALSVDGKIIKIVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHL---QAGAKK 181
Query: 397 LLYQLPVLMP-PCLLWVLT*KLMT---PF*GHLKCFLHHKLFAPLAKVIQDNFEIFKGLM 564
+L P P + + +L + + C + AP KV+ F I KG M
Sbjct: 182 VLITAPGKGDIPTYVVGVNAELYSHEDTIISNASCTTN--CLAPFVKVLDQKFGIIKGTM 239
Query: 565 XXXXXXXXXXXXXDGLSGKLWRDGRGAQQNIIPASTG 675
D S + R R A NI+P STG
Sbjct: 240 TTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTG 275
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 476 VISNASCTTNCL 511
+ISNASCTTNCL
Sbjct: 210 IISNASCTTNCL 221
>At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenase
A, chloroplast (GAPA) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A
identical to SP|P25856 Glyceraldehyde 3-phosphate
dehydrogenase A, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit A) {Arabidopsis thaliana}
Length = 396
Score = 75.8 bits (178), Expect = 2e-14
Identities = 35/68 (51%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +3
Query: 261 IAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAP-SADAPMFV 437
I V S R+P +PW + G + V+E TGVF + A H+E GAKKVII+AP D P +V
Sbjct: 134 IQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKVIITAPGKGDIPTYV 193
Query: 438 VGVNLEAY 461
VGVN +AY
Sbjct: 194 VGVNADAY 201
Score = 48.4 bits (110), Expect = 4e-06
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 13/219 (5%)
Frame = +1
Query: 58 KIGINGFGRIGRLVLR---ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEV 228
K+ INGFGRIGR LR + ++AIND G+ +L KYDST G F V+
Sbjct: 63 KVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIFDADVKP 121
Query: 229 Q-DGFLVVNG--TKLPFSQKGTLRPFHGEKLGLNML---*SLLVSLPLQIKHLLTWREVL 390
+ + V+G ++ ++ +L P+ ++LG++++ + V KH+
Sbjct: 122 SGETAISVDGKIIQVVSNRNPSLLPW--KELGIDIVIEGTGVFVDREGAGKHI---EAGA 176
Query: 391 KKLLYQLPVL--MPPCLLWVLT*KLM--TPF*GHLKCFLHHKLFAPLAKVIQDNFEIFKG 558
KK++ P +P ++ V P + C + AP KV+ F I KG
Sbjct: 177 KKVIITAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTN--CLAPFVKVLDQKFGIIKG 234
Query: 559 LMXXXXXXXXXXXXXDGLSGKLWRDGRGAQQNIIPASTG 675
M D S + R R A NI+P STG
Sbjct: 235 TMTTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTG 272
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 476 VISNASCTTNCL 511
+ISNASCTTNCL
Sbjct: 207 IISNASCTTNCL 218
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Frame = +3
Query: 261 IAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPS--ADAPMF 434
I V S RDP +PW + G + V+E TGVF A H++ GA KVII+AP+ AD P +
Sbjct: 154 IKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGASKVIITAPAKGADIPTY 213
Query: 435 VVGVNLEAY 461
V+GVN + Y
Sbjct: 214 VMGVNEQDY 222
Score = 51.2 bits (117), Expect = 6e-07
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 13/219 (5%)
Frame = +1
Query: 58 KIGINGFGRIGRLVLR---ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEV 228
K+ INGFGRIGR LR + +VV +ND G+ +L KYDS G FK V++
Sbjct: 83 KVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSG-GVKNASHLLKYDSMLGTFKAEVKI 141
Query: 229 QDGFLV-VNGTKLPFSQKGTLRPFHGEKLGLNML---*SLLVSLPLQIKHLLTWREVLKK 396
D + V+G + +LG++++ + V P KH+ + K
Sbjct: 142 VDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHI---QAGASK 198
Query: 397 LLYQLPVL---MPPCLLWVLT*KL---MTPF*GHLKCFLHHKLFAPLAKVIQDNFEIFKG 558
++ P +P ++ V + + C + AP AKV+ + F I KG
Sbjct: 199 VIITAPAKGADIPTYVMGVNEQDYGHDVANIISNASCTTN--CLAPFAKVLDEEFGIVKG 256
Query: 559 LMXXXXXXXXXXXXXDGLSGKLWRDGRGAQQNIIPASTG 675
M D S + R R A NI+P STG
Sbjct: 257 TMTTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTG 294
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 476 VISNASCTTNCL 511
+ISNASCTTNCL
Sbjct: 229 IISNASCTTNCL 240
>At5g18170.1 68418.m02133 glutamate dehydrogenase 1 (GDH1) identical
to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis
thaliana] SWISS-PROT:Q43314
Length = 411
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 67 INGFGRIGRLVLRASIEKGAQVVAIND 147
I GFG +G + EKG ++VA++D
Sbjct: 211 IQGFGNVGSWAAKLISEKGGKIVAVSD 237
>At5g07440.1 68418.m00851 glutamate dehydrogenase 2 (GDH2) identical
to glutamate dehydrogenase 2 (GDH 2) [Arabidopsis
thaliana] SWISS-PROT:Q38946
Length = 411
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 67 INGFGRIGRLVLRASIEKGAQVVAIND 147
I GFG +G + EKG +VVA++D
Sbjct: 211 IQGFGNVGTWAAKLIHEKGGKVVAVSD 237
>At2g44030.1 68415.m05474 kelch repeat-containing F-box family
protein low similarity to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 380
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 92 VWCSVLLLKRELKWSL*MTLSSVLTI 169
+WC+++LL+REL W + +V T+
Sbjct: 331 IWCALILLERELVWGVIEWSENVFTL 356
>At4g01330.1 68417.m00173 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 329
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -2
Query: 168 IVKTDERVIYSDHLSSLFNRSTEHQTANAAKS 73
I KT+ RV++SD +SS +R T +TA+ + S
Sbjct: 103 IGKTEHRVVFSDRVSSGESRGTVSETASYSGS 134
>At3g03910.1 68416.m00405 glutamate dehydrogenase, putative similar
to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis
thaliana] SWISS-PROT:Q43314
Length = 411
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 58 KIGINGFGRIGRLVLRASIEKGAQVVAIND 147
+ I GFG +G + +KG ++VA++D
Sbjct: 208 RFAIQGFGNVGSWAAKLISDKGGKIVAVSD 237
>At1g05690.1 68414.m00590 TAZ zinc finger family protein / BTB/POZ
domain-containing protein contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF02135 : TAZ zinc finger;
similar to p300/CBP acetyltransferase-related protein
(GI:12597461) [Arabidopsis thaliana]; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 364
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +3
Query: 489 LLAPQTVC--PTCKGYPG*L*NF*GLNDYCSCHNC 587
L TVC P CKG G L +F G SC +C
Sbjct: 262 LKGSHTVCKFPACKGLEGALRHFLGCKSRASCSHC 296
>At1g21440.1 68414.m02681 mutase family protein similar to
carboxyvinyl-carboxyphosphonate phosphorylmutase
GB:O49290 from [Arabidopsis thaliana]; similar to
carboxyphosphonoenolpyruvate mutase (GI:47149)
[Streptomyces hygroscopicus]; contains Prosite PS00161:
Isocitrate lyase signature
Length = 336
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 306 KAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFVVGVNLEAY 461
+ A + TG+ D+A+ ++E GA + AP D + +G + Y
Sbjct: 191 RTDARALSAKTGLSDAIDRANLYMEAGADASFVEAPRDDDELKEIGRRTKGY 242
>At3g48470.1 68416.m05291 expressed protein
Length = 1017
Score = 27.9 bits (59), Expect = 6.5
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +1
Query: 214 GSVEVQDGFLVVNGTKL-PFSQKGTLRPFHGEKLGLNML*SLLVSLPLQIKHLLT-WREV 387
G++EV D F + T++ + + P+ EK+ +L L P ++ T W
Sbjct: 279 GAIEV-DTFQLDPTTRIWSKTMEAVTDPYAVEKMAEQLLHQLYAEHPSDVEAFWTIWTLF 337
Query: 388 LKKLLYQLPVLMPPCLLWVLT*KLMTPF 471
+ +++Q V C LW L PF
Sbjct: 338 HRNVIHQASVRQAKCFLWQLDSFFRYPF 365
>At3g05360.1 68416.m00584 disease resistance family protein / LRR
family protein contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611; similar to
elicitor-inducible LRR receptor-like protein EILP
[Nicotiana tabacum] gi|6635236|dbj|BAA88636; similar to
Cf-2.2 [Lycopersicon pimpinellifolium]
gi|1184077|gb|AAC15780
Length = 786
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -2
Query: 657 DVLLSTTAITP*FSRKSINSFLCSSCGMNSSH*ALKNFKVILDNLCKWGKQFVVQEAFEM 478
D+LLS + + N SS ++S+ L+NF IL NL V F+
Sbjct: 163 DLLLSENSFSGNIPTSFTNLTKLSSLDISSNQFTLENFSFILPNLTSLSSLNVASNHFKS 222
Query: 477 TL 472
TL
Sbjct: 223 TL 224
>At3g63330.1 68416.m07125 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 376
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 340 VSLPLQIKHLLTWREVLKKLLYQLPVLMPPCLL 438
V+ L +H+ W E K+L Y+L LM C+L
Sbjct: 262 VTRALLDQHIRGWSENFKELAYKLRSLMEMCIL 294
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,129,612
Number of Sequences: 28952
Number of extensions: 350554
Number of successful extensions: 887
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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