Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120167.Seq
(774 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 33 0.045
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 31 0.14
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.18
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 30 0.32
SPAC31G5.08 |ups1|ups|uroporphyrinogen-III synthase Ups1|Schizos... 29 0.56
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 29 0.98
SPBC1539.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 1.7
SPCC162.10 |ppk33||serine/threonine protein kinase Ppk33 |Schizo... 28 1.7
SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|ch... 27 3.0
SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c... 27 3.9
SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cu... 27 3.9
SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 6.9
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 26 6.9
SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces pomb... 25 9.1
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 25 9.1
SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr 3|||... 25 9.1
SPCC663.13c |||N-acetyltransferase |Schizosaccharomyces pombe|ch... 25 9.1
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 33.1 bits (72), Expect = 0.045
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 290 EGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNML 469
EGE DD+ +ES + +++ +S+K + E +ND R E + + L A L +
Sbjct: 373 EGELDDILTTLESDREQLRRHEEHSQKLLKFIEEIRNDYEERIHALESQNSALKAHLRLA 432
Query: 470 QSA 478
A
Sbjct: 433 VDA 435
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 31.5 bits (68), Expect = 0.14
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +2
Query: 287 TEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHE-TFKNDVGN--RFEQFELRLNELDAK 457
T G + + + IE +L ++ +S F+ T+ + K++V F F+L+L L
Sbjct: 571 TNGPSETISEDIEEILPSLESSERSSTPFLNTNSASLKSEVVQLTTFSDFQLKLKTLQCV 630
Query: 458 LNMLQS 475
L++LQS
Sbjct: 631 LDILQS 636
>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 700
Score = 31.1 bits (67), Expect = 0.18
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +2
Query: 284 QTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLN 463
+ EG++ DL KI + K KLNT ++T + + ++ E R+ L+ +LN
Sbjct: 512 ELEGKKADLTSKINRLDKDFVKLNTTYS--LLTDQVKTKQLA--LQEIESRVIRLEERLN 567
Query: 464 MLQ 472
MLQ
Sbjct: 568 MLQ 570
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 30.3 bits (65), Expect = 0.32
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +2
Query: 290 EGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNML 469
E +L E+ +K ++ TNS+ V+ + N++ ++ ++ +L+LNE + K L
Sbjct: 554 ENHYSNLSSDYETQIKSLESSLTNSQAECVSFQEKINELNSQIDELKLKLNEANKKYQEL 613
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 350 LNTNSEKFMVTHETFKNDVGNRFEQFELRLNELD-AKLNMLQSAEKLKT 493
L NSEKF E+ K+ V N + NE+D + N+L + +T
Sbjct: 360 LKENSEKFKQNSESLKSRVDNLNDYITKLQNEIDECRRNLLWAESSCET 408
>SPAC31G5.08 |ups1|ups|uroporphyrinogen-III synthase
Ups1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 251
Score = 29.5 bits (63), Expect = 0.56
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 630 KMSLLAQNKSE-FDAVVDAFRKYGQMLVFGNVARKR 526
K +LL + KS+ FD V+AF KYG+ F V R +
Sbjct: 2 KTALLLKTKSQPFDPYVEAFEKYGRDTAFIPVLRHK 37
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 28.7 bits (61), Expect = 0.98
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 266 NALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFE---QFELR 436
N++ +QT+ DL+ + E + +K L ++ ET KND N E +E
Sbjct: 315 NSINEIQTQNR--DLKLETEKLQDQIKALLERNQSLQEALETVKNDEKNLREMNANYETE 372
Query: 437 LNELDAKLN 463
+ E KLN
Sbjct: 373 MKEARQKLN 381
>SPBC1539.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 386
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +2
Query: 302 DDLRDKIESVLKHVKKLNTNSEKFMVTHETFK-----NDVGNRFEQFELRLNELDAKLNM 466
D+ + ++ ++K KKL ++E+ H T K N +G F + ++ L +D KL++
Sbjct: 208 DENGEILKRLVKKEKKLKNDNERLENEHRTEKLNVNANSLGKSFVKHDIPLPPVDLKLDI 267
Query: 467 LQ 472
+
Sbjct: 268 FE 269
>SPCC162.10 |ppk33||serine/threonine protein kinase Ppk33
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +1
Query: 703 AIQCINEKLYDKHYKIRKIAN 765
A++CIN+K +D+H KI+K+ N
Sbjct: 57 ALKCINKKKHDEH-KIKKLRN 76
>SPBC17G9.08c |csx2||Arf GAP protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 870
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 150 EIIFHKQKSKRDLNSLGALFATKQGLLKILMRLNFTTKA 266
++ FH Q+ KRD+ +L ++ T L L+ F++ A
Sbjct: 79 QLEFHAQEGKRDVTNLTCVYGTSPQQLDRLITREFSSDA 117
>SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 436
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 99 RAQFQDLCKNLLHCRIL 49
RA+F +LC N+LH R L
Sbjct: 396 RAKFNNLCSNILHFRAL 412
>SPAC31A2.11c |cuf1||Cu metalloregulatory transcription factor Cuf1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +2
Query: 326 SVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNMLQSAEKLKTAIVT 505
+ L H+ L + H TFK++V N +EL +EL A + S+ + I T
Sbjct: 350 AALNHISALEKETISHTDLHHTFKHEV-NSSNNYELTNDELAASSPLYTSSSVPPSHITT 408
>SPBP8B7.28c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 215
Score = 25.8 bits (54), Expect = 6.9
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = -1
Query: 210 RTMRPTS*DRVWISACEK*FRLN--GKLDR---CPNCNQVCRRAQFQDLCKNL 67
RT +P D +W +AC++ +N K R P C Q+C +Q D NL
Sbjct: 81 RTCQPKQHDSIWCTACQQTKGINEFSKAQRHVLDPRC-QICVHSQRNDGDDNL 132
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +2
Query: 221 GVVENFDAVKFYNKSNALLHLQTEGERDDLRDKIESVLKHVKKLNTNSEK 370
GV E ++ K ++ ++ + T+GE DL D+I+ L ++ + ++ K
Sbjct: 619 GVQEMLNSRKM-TEAGSIELIDTQGEESDLEDRIDRTLPGARRGDLSARK 667
>SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 323
Score = 25.4 bits (53), Expect = 9.1
Identities = 11/61 (18%), Positives = 28/61 (45%)
Frame = +2
Query: 290 EGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNML 469
+GE +++ ++ + + +LNT + E + RF + R N +D + + +
Sbjct: 148 KGEMAEMKVEMVEMKRETIRLNTRIDLLEQKTEARFQSIEQRFNSIDQRFNSIDRRFDSM 207
Query: 470 Q 472
+
Sbjct: 208 E 208
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 25.4 bits (53), Expect = 9.1
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = -3
Query: 508 FRYDGGFQFFGR---LQHVKFGVEFVQTQFKLLK--PVAHIVLERFVGDHKFFAVCIQ 350
+ YD FQ +Q+ ++ +Q FK PVA +LER+V K + CI+
Sbjct: 253 YYYDLAFQNVNNDSFVQNYGKALQHIQRAFKTRNNDPVASSILERYVYSKKNYEGCIK 310
>SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 247
Score = 25.4 bits (53), Expect = 9.1
Identities = 11/61 (18%), Positives = 28/61 (45%)
Frame = +2
Query: 290 EGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNML 469
+GE +++ ++ + + +LNT + E + RF + R N +D + + +
Sbjct: 148 KGEMAEMKVEMVEMKRETIRLNTRIDLLEQKTEARFQSIEQRFNSIDQRFNSIDRRFDSM 207
Query: 470 Q 472
+
Sbjct: 208 E 208
>SPCC663.13c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 144
Score = 25.4 bits (53), Expect = 9.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 676 DGVHPNPLLAIQCINEKLYD 735
D ++PN L ++ INEK +D
Sbjct: 5 DAINPNNLKILEVINEKCFD 24
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,137,437
Number of Sequences: 5004
Number of extensions: 65318
Number of successful extensions: 249
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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