Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120165.Seq
(845 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p pro... 56 8e-08
AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal pr... 56 8e-08
AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA ... 56 8e-08
DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosom... 54 2e-07
BT025057-1|ABE73228.1| 481|Drosophila melanogaster IP15830p pro... 33 0.65
BT004882-1|AAO45238.1| 481|Drosophila melanogaster GH13361p pro... 33 0.65
AE014298-2818|AAF48935.1| 481|Drosophila melanogaster CG7874-PA... 33 0.65
BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p pro... 31 2.6
AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA... 31 2.6
>BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p
protein.
Length = 269
Score = 55.6 bits (128), Expect = 8e-08
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = +1
Query: 685 GREYGKFATLCIFRRTQDV*TS*AT*YPRKSLPKRNRMDAYNIIKFPLTSEAA 843
G K T FRR + + YPRKS+P RNRMDAYNIIK+PLT+EAA
Sbjct: 147 GTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAA 199
Score = 37.5 bits (83), Expect = 0.023
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 645 ALKAQRKVVKGEHGKRVRKIRNSVHFPQDPRRLNL 749
A K Q+K++KG G R RKIR +VHF + P L L
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHF-RRPTTLKL 167
>AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal
protein L23a protein.
Length = 269
Score = 55.6 bits (128), Expect = 8e-08
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = +1
Query: 685 GREYGKFATLCIFRRTQDV*TS*AT*YPRKSLPKRNRMDAYNIIKFPLTSEAA 843
G K T FRR + + YPRKS+P RNRMDAYNIIK+PLT+EAA
Sbjct: 147 GTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAA 199
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +3
Query: 645 ALKAQRKVVKGEHGKRVRKIRNSVHFPQDPRRLNL 749
A K Q+K++K G R RKIR +VHF + P L L
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHF-RRPTTLKL 167
>AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA
protein.
Length = 277
Score = 55.6 bits (128), Expect = 8e-08
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = +1
Query: 685 GREYGKFATLCIFRRTQDV*TS*AT*YPRKSLPKRNRMDAYNIIKFPLTSEAA 843
G K T FRR + + YPRKS+P RNRMDAYNIIK+PLT+EAA
Sbjct: 155 GTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYPLTTEAA 207
Score = 37.5 bits (83), Expect = 0.023
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 645 ALKAQRKVVKGEHGKRVRKIRNSVHFPQDPRRLNL 749
A K Q+K++KG G R RKIR +VHF + P L L
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHF-RRPTTLKL 175
>DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosomal
protein naturalvariant protein.
Length = 277
Score = 54.4 bits (125), Expect = 2e-07
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +1
Query: 763 YPRKSLPKRNRMDAYNIIKFPLTSEAA 843
YPRKS+P RNRMDAYNIIK+PLT+EAA
Sbjct: 181 YPRKSVPTRNRMDAYNIIKYPLTTEAA 207
Score = 36.7 bits (81), Expect = 0.040
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 645 ALKAQRKVVKGEHGKRVRKIRNSVHFPQDPRRLNL 749
A K Q+K++KG G R RKIR +VHF + P L L
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHF-RRPTTLKL 175
>BT025057-1|ABE73228.1| 481|Drosophila melanogaster IP15830p
protein.
Length = 481
Score = 32.7 bits (71), Expect = 0.65
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 136 TCVSQNTGTCPESSCACPETSCACPETSCACP-ESSLCPE 252
T + T + PE S + PE S + PE + + P ESS PE
Sbjct: 155 TSAPEETTSAPEESSSAPEESSSAPEETTSAPEESSSAPE 194
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 136 TCVSQNTGTCPESSCACPETSCACPETSCACP-ESSLCPE 252
T + + + PE S + PE + + PE S + P ESS PE
Sbjct: 162 TSAPEESSSAPEESSSAPEETTSAPEESSSAPEESSSAPE 201
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 148 QNTGTCPESSCACPETSCACPETSCACP-ESSLCPER 255
+ T + PE S + PE S + PE + + P ESS P++
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEESSSAPDQ 216
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 148 QNTGTCPESSCACPETSCACPETSCACP-ESSLCPE 252
+ T + PE + + PE + + PE S + P ESS PE
Sbjct: 145 EETTSAPEETTSAPEETTSAPEESSSAPEESSSAPE 180
Score = 30.3 bits (65), Expect = 3.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 136 TCVSQNTGTCPESSCACPETSCACPETSCACPESS 240
T + T + PE + + PE S + PE S + PE +
Sbjct: 148 TSAPEETTSAPEETTSAPEESSSAPEESSSAPEET 182
Score = 29.5 bits (63), Expect = 6.1
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 148 QNTGTCPESSCACPETSCACPETSCACP-ESSLCPE 252
Q + + PE + + PE + + PE + + P ESS PE
Sbjct: 138 QESSSAPEETTSAPEETTSAPEETTSAPEESSSAPE 173
>BT004882-1|AAO45238.1| 481|Drosophila melanogaster GH13361p
protein.
Length = 481
Score = 32.7 bits (71), Expect = 0.65
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 136 TCVSQNTGTCPESSCACPETSCACPETSCACP-ESSLCPE 252
T + T + PE S + PE S + PE + + P ESS PE
Sbjct: 155 TSAPEETTSAPEESSSAPEESSSAPEETTSAPEESSSAPE 194
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 136 TCVSQNTGTCPESSCACPETSCACPETSCACP-ESSLCPE 252
T + + + PE S + PE + + PE S + P ESS PE
Sbjct: 162 TSAPEESSSAPEESSSAPEETTSAPEESSSAPEESSSAPE 201
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 148 QNTGTCPESSCACPETSCACPETSCACP-ESSLCPER 255
+ T + PE S + PE S + PE + + P ESS P++
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEESSSAPDQ 216
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 148 QNTGTCPESSCACPETSCACPETSCACP-ESSLCPE 252
+ T + PE + + PE + + PE S + P ESS PE
Sbjct: 145 EETTSAPEETTSAPEETTSAPEESSSAPEESSSAPE 180
Score = 30.3 bits (65), Expect = 3.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 136 TCVSQNTGTCPESSCACPETSCACPETSCACPESS 240
T + T + PE + + PE S + PE S + PE +
Sbjct: 148 TSAPEETTSAPEETTSAPEESSSAPEESSSAPEET 182
Score = 29.5 bits (63), Expect = 6.1
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 148 QNTGTCPESSCACPETSCACPETSCACP-ESSLCPE 252
Q + + PE + + PE + + PE + + P ESS PE
Sbjct: 138 QESSSAPEETTSAPEETTSAPEETTSAPEESSSAPE 173
>AE014298-2818|AAF48935.1| 481|Drosophila melanogaster CG7874-PA
protein.
Length = 481
Score = 32.7 bits (71), Expect = 0.65
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 136 TCVSQNTGTCPESSCACPETSCACPETSCACP-ESSLCPE 252
T + T + PE S + PE S + PE + + P ESS PE
Sbjct: 155 TSAPEETTSAPEESSSAPEESSSAPEETTSAPEESSSAPE 194
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 136 TCVSQNTGTCPESSCACPETSCACPETSCACP-ESSLCPE 252
T + + + PE S + PE + + PE S + P ESS PE
Sbjct: 162 TSAPEESSSAPEESSSAPEETTSAPEESSSAPEESSSAPE 201
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 148 QNTGTCPESSCACPETSCACPETSCACP-ESSLCPER 255
+ T + PE S + PE S + PE + + P ESS P++
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEESSSAPDQ 216
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 148 QNTGTCPESSCACPETSCACPETSCACP-ESSLCPE 252
+ T + PE + + PE + + PE S + P ESS PE
Sbjct: 145 EETTSAPEETTSAPEETTSAPEESSSAPEESSSAPE 180
Score = 30.3 bits (65), Expect = 3.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 136 TCVSQNTGTCPESSCACPETSCACPETSCACPESS 240
T + T + PE + + PE S + PE S + PE +
Sbjct: 148 TSAPEETTSAPEETTSAPEESSSAPEESSSAPEET 182
Score = 29.5 bits (63), Expect = 6.1
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 148 QNTGTCPESSCACPETSCACPETSCACP-ESSLCPE 252
Q + + PE + + PE + + PE + + P ESS PE
Sbjct: 138 QESSSAPEETTSAPEETTSAPEETTSAPEESSSAPE 173
>BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p
protein.
Length = 985
Score = 30.7 bits (66), Expect = 2.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 683 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 591
M+ Y+ P LK +NR H+F L+L + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
>AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA
protein.
Length = 985
Score = 30.7 bits (66), Expect = 2.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 683 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 591
M+ Y+ P LK +NR H+F L+L + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,151,389
Number of Sequences: 53049
Number of extensions: 360388
Number of successful extensions: 1381
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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