Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120164.Seq
         (530 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1731|AAF58365.1|  950|Drosophila melanogaster CG6061-PA...    29   3.0  
AY058431-1|AAL13660.1|  581|Drosophila melanogaster GH20963p pro...    28   6.9  
AE014296-2347|AAF49768.2|  581|Drosophila melanogaster CG6661-PA...    28   6.9  
AE014298-2775|AAF48890.1|  722|Drosophila melanogaster CG7095-PA...    28   9.1  

>AE013599-1731|AAF58365.1|  950|Drosophila melanogaster CG6061-PA
           protein.
          Length = 950

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = -3

Query: 231 NTHECHKTLTPCSTHSDCNLCREGLANCQLFDEDTIVKMRGDDGQEQEK 85
           N  EC++   PCS+   C  CR  + +    D D++  + G +GQ+++K
Sbjct: 824 NYCECYEAKIPCSSICKCVGCR-NMEDRPDVDMDSLDGLMGVEGQKKDK 871


>AY058431-1|AAL13660.1|  581|Drosophila melanogaster GH20963p
           protein.
          Length = 581

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +2

Query: 158 NPSRHRLQSLCVEHGVKVL*HSCV-LPSIIISDAV--Q*AARPCC 283
           NPS HR Q + V H ++ + H  + +P+II  D V      R CC
Sbjct: 60  NPSIHRNQRVLVNHAIQEIQHRPLEVPTIIGDDTVYTMDTQRVCC 104


>AE014296-2347|AAF49768.2|  581|Drosophila melanogaster CG6661-PA
           protein.
          Length = 581

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +2

Query: 158 NPSRHRLQSLCVEHGVKVL*HSCV-LPSIIISDAV--Q*AARPCC 283
           NPS HR Q + V H ++ + H  + +P+II  D V      R CC
Sbjct: 60  NPSIHRNQRVLVNHAIQEIQHRPLEVPTIIGDDTVYTMDTQRVCC 104


>AE014298-2775|AAF48890.1|  722|Drosophila melanogaster CG7095-PA
           protein.
          Length = 722

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 107 MTAKNRRSLFEREKPTAWLWIENAPDRV 24
           +T K+  SL+  + P  W W   APD V
Sbjct: 289 LTVKDDSSLYRFQTPYYWPWQHKAPDNV 316


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,498,932
Number of Sequences: 53049
Number of extensions: 496080
Number of successful extensions: 1116
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)