Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120163.Seq
(762 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41658 Cluster: Late expression factor 5; n=13; Nucleop... 234 2e-60
UniRef50_P24745 Cluster: Uncharacterized 38.0 kDa protein in P14... 186 4e-46
UniRef50_O10344 Cluster: Late expression factor 5; n=8; Nucleopo... 113 5e-24
UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep: L... 93 9e-18
UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Le... 90 6e-17
UniRef50_Q9J868 Cluster: ORF67; n=4; Nucleopolyhedrovirus|Rep: O... 75 2e-12
UniRef50_Q0N417 Cluster: 38K protein; n=8; Nucleopolyhedrovirus|... 72 2e-11
UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;... 71 2e-11
UniRef50_Q0IL16 Cluster: ORF103; n=4; Nucleopolyhedrovirus|Rep: ... 65 2e-09
UniRef50_Q0ZP22 Cluster: Late expression factor 5; n=3; Nucleopo... 52 2e-05
UniRef50_P41729 Cluster: Uncharacterized 41.0 kDa protein in P14... 38 0.21
UniRef50_A2DNM0 Cluster: Putative uncharacterized protein; n=1; ... 37 0.47
UniRef50_A7ATN2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q2J7N2 Cluster: Benzoate membrane transport protein; n=... 33 7.7
>UniRef50_P41658 Cluster: Late expression factor 5; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 265
Score = 234 bits (573), Expect = 2e-60
Identities = 112/163 (68%), Positives = 121/163 (74%), Gaps = 1/163 (0%)
Frame = +1
Query: 277 MSFNDGVVKAQTDPFALKRGGHNVQKWTSYALFKLFKEFRINKNYSKLIDFLTENFPNNV 456
MSF+DGVVKAQTDPFALKRGGHNVQKWTSYALFKLFKEFRINKNYSKLIDFLTENFPNNV
Sbjct: 1 MSFDDGVVKAQTDPFALKRGGHNVQKWTSYALFKLFKEFRINKNYSKLIDFLTENFPNNV 60
Query: 457 KNKTFNFSSTGHLFHSLPRTCPA-SRFGEGAQTNSIADRIFGKAVQQHNKRFQTVH*VVR 633
KNKTFNFSSTGHLFHSL P+ S + + + K F+ +
Sbjct: 61 KNKTFNFSSTGHLFHSLHAYVPSVSDLVKERKQIRLQTEYLAKLFNNTINDFKLYTELYE 120
Query: 634 VYRTDRSVDCCCPCQLLHKSLFNTRNYVKTLNCKLFDIKPPKF 762
VDCCCPCQLLHKSL NT+NYV+ LNCKLFDIKPPKF
Sbjct: 121 FIERTEGVDCCCPCQLLHKSLLNTKNYVENLNCKLFDIKPPKF 163
>UniRef50_P24745 Cluster: Uncharacterized 38.0 kDa protein in
P143-LEF5 intergenic region; n=12;
Nucleopolyhedrovirus|Rep: Uncharacterized 38.0 kDa
protein in P143-LEF5 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 320
Score = 186 bits (454), Expect = 4e-46
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = -3
Query: 253 DLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNYCMQIFKAPADNMCDIRHNIKRAFK 74
DLKYLGFEKYKFFEYVIFQFCNDP LCKIIENNYNYCMQIFKAPAD+M DIRHNIKRAFK
Sbjct: 31 DLKYLGFEKYKFFEYVIFQFCNDPQLCKIIENNYNYCMQIFKAPADDMRDIRHNIKRAFK 90
Query: 73 TPVLGHMCVLSNKPPMYSFLKEWF 2
TPVLGHMCVLSNKPPMYSFLKEWF
Sbjct: 91 TPVLGHMCVLSNKPPMYSFLKEWF 114
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/50 (66%), Positives = 34/50 (68%)
Frame = -1
Query: 342 MASSLQSKWICLRLNDAIIKRHVLVLSEYETSNTLALKSINFLNM*YFNF 193
MASSLQSKWICLRLNDAIIKRHVLVLSEY L + F F F
Sbjct: 1 MASSLQSKWICLRLNDAIIKRHVLVLSEYADLKYLGFEKYKFFEYVIFQF 50
>UniRef50_O10344 Cluster: Late expression factor 5; n=8;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 263
Score = 113 bits (272), Expect = 5e-24
Identities = 71/164 (43%), Positives = 89/164 (54%), Gaps = 2/164 (1%)
Frame = +1
Query: 277 MSFNDGVVKAQTDPFALKRGGHNVQKWTSYALFKLFKEFRINKNYSKLIDFLTENFPNNV 456
M+ GV ++QT P A H Q WT ALF +F FR +K+Y+KLI+FLT NF V
Sbjct: 1 MALVKGVAQSQTRPLAF----HGEQ-WTPRALFTVFGAFRASKDYAKLIEFLTNNFACYV 55
Query: 457 KNKTFNFSSTGHLFHSLPRTCP--ASRFGEGAQTNSIADRIFGKAVQQHNKRFQTVH*VV 630
KNKTFNF+ TGHLFHSL P + E Q D + + + F+ V
Sbjct: 56 KNKTFNFAGTGHLFHSLYAFVPNVSELVKERKQIRLQIDCVM-RLFKNTTNDFKMY--VE 112
Query: 631 RVYRTDRSVDCCCPCQLLHKSLFNTRNYVKTLNCKLFDIKPPKF 762
D CPC LL +S N ++V+ LNCKLFDIKPPKF
Sbjct: 113 LFAFIDAHGGAECPCLLLQQSKLNAVSFVENLNCKLFDIKPPKF 156
>UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep:
Lef-5 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 302
Score = 92.7 bits (220), Expect = 9e-18
Identities = 53/137 (38%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Frame = +1
Query: 352 KWTSYALFKLFKEFRINKNYSKLIDFLTENFPNNVKNKTFNFSSTGHLFHSLPRTCPASR 531
K+ Y L+ +FK+FR N Y LI FL +N+P +VKNKTFNF +TGHLFHSL PA
Sbjct: 32 KFHCYDLYLIFKQFRDNNQYKDLIMFLVKNYPGHVKNKTFNFVNTGHLFHSLYAYIPALT 91
Query: 532 FGEGAQTN-SIADRIFGKAVQQHNKRFQTVH*VVRVYRTDRSVDCCCPCQLLHKSLFNTR 708
E + ++ K F+ + + D+ + CPCQLL +
Sbjct: 92 GSERERKQIRLSVDCVHKLFDNTINPFKLYGELFDMINADQQLIGTCPCQLLLARREVIK 151
Query: 709 NYVKTLNCKLFDIKPPK 759
NYV + K FD KPPK
Sbjct: 152 NYVLLIKEKKFDTKPPK 168
>UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Lef5
- Helicoverpa armigera NPV
Length = 315
Score = 89.8 bits (213), Expect = 6e-17
Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Frame = +1
Query: 271 ENMSFNDGVVKAQTDPFALKRGGHNVQKWTSYALFKLFKEFRINKNYSKLIDFLTENFPN 450
+N+S N + +++ DP A+ Y L+ +F EFR + +LIDFL E++P+
Sbjct: 16 KNVSSNQRISQSERDPQAMH----------CYQLYVIFSEFREKNQHKQLIDFLVEHYPS 65
Query: 451 NVKNKTFNFSSTGHLFHSLPRTCPASRFGEGAQTN-SIADRIFGKAVQQHNKRFQTVH*V 627
NVKNKTFNF +TGHLFHSL P+ E + ++ K F+ +
Sbjct: 66 NVKNKTFNFQNTGHLFHSLYAYVPSVTNAERERKQIRLSTECIHKLFVNTINDFKMYGEI 125
Query: 628 VRVYRT--DRSVDCCCPCQLLHKSLFNTRNYVKTLNCKLFDIKPPK 759
+ T + + CPCQ++ ++YV + K FD KPPK
Sbjct: 126 FDLIHTTPEYKIKYVCPCQIMLDKRDAIQSYVDKIKTKKFDSKPPK 171
>UniRef50_Q9J868 Cluster: ORF67; n=4; Nucleopolyhedrovirus|Rep:
ORF67 - Spodoptera exigua MNPV
Length = 300
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = -3
Query: 253 DLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNYCMQIFKAPADNMCDIRHNIKRAFK 74
DL + F K FE+VIF F + + + +Y +QI K AD+M DIR N+KRA+K
Sbjct: 27 DLACVSFRHLKMFEFVIFAFDVNQRI-----DTSDYMVQIVKC-ADDMTDIRLNLKRAYK 80
Query: 73 TPVLGHMCVLSNKPPMYSFLKEWF 2
T LGH+ V++ K PMY FLKEW+
Sbjct: 81 TSALGHVYVINEKIPMYGFLKEWY 104
>UniRef50_Q0N417 Cluster: 38K protein; n=8;
Nucleopolyhedrovirus|Rep: 38K protein - Clanis bilineata
nucleopolyhedrosis virus
Length = 336
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/86 (40%), Positives = 54/86 (62%)
Frame = -3
Query: 259 VRDLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNYCMQIFKAPADNMCDIRHNIKRA 80
++D+ Y+ F + FE+V+F+F N+ KI + Y MQ+ K D+M D+R ++K A
Sbjct: 46 LQDMSYI-FRHLELFEFVVFEFNNNEKYAKI--DTGTYMMQLIKCQ-DSMNDLRSHLKLA 101
Query: 79 FKTPVLGHMCVLSNKPPMYSFLKEWF 2
FKT LGH V + + P+Y FLKEW+
Sbjct: 102 FKTSALGHTYVFNERIPLYCFLKEWY 127
>UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;
Granulovirus|Rep: Late expression factor 5 homolog -
Cryptophlebia leucotreta granulosis virus (ClGV)
(Cryptophlebialeucotreta granulovirus)
Length = 240
Score = 71.3 bits (167), Expect = 2e-11
Identities = 42/130 (32%), Positives = 65/130 (50%)
Frame = +1
Query: 370 LFKLFKEFRINKNYSKLIDFLTENFPNNVKNKTFNFSSTGHLFHSLPRTCPASRFGEGAQ 549
LF +F +FR +Y L+++L N+ NVKN+TFNF +TGH+FH L P+ E Q
Sbjct: 19 LFNVFSKFRKENDYDGLVNYLITNYSQNVKNRTFNFHNTGHIFHMLYAYVPSPSSKERKQ 78
Query: 550 TNSIADRIFGKAVQQHNKRFQTVH*VVRVYRTDRSVDCCCPCQLLHKSLFNTRNYVKTLN 729
I ++ F+ ++++ D CPC+L+ L + Y ++L
Sbjct: 79 ---IRLDCIENLLESTKNDFKLYEDLIKLMNGDDK----CPCELITARLNDNIAYNESLK 131
Query: 730 CKLFDIKPPK 759
K FD KP K
Sbjct: 132 NKNFDSKPCK 141
>UniRef50_Q0IL16 Cluster: ORF103; n=4; Nucleopolyhedrovirus|Rep:
ORF103 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 348
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/87 (39%), Positives = 48/87 (55%)
Frame = -3
Query: 262 RVRDLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNYCMQIFKAPADNMCDIRHNIKR 83
R +D + L + FEY++F+F D + + Y M +FK AD+M DIR IK
Sbjct: 67 RFQDTRMLSIRHLENFEYILFKFVPDSSI-----DTQKYAMNLFKC-ADSMPDIRFYIKN 120
Query: 82 AFKTPVLGHMCVLSNKPPMYSFLKEWF 2
K LGH+ V+ + PMY FLKEW+
Sbjct: 121 TCKISYLGHVYVIGLRYPMYGFLKEWY 147
>UniRef50_Q0ZP22 Cluster: Late expression factor 5; n=3;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Neodiprion abietis nucleopolyhedrovirus
Length = 235
Score = 52.0 bits (119), Expect = 2e-05
Identities = 39/127 (30%), Positives = 60/127 (47%)
Frame = +1
Query: 379 LFKEFRINKNYSKLIDFLTENFPNNVKNKTFNFSSTGHLFHSLPRTCPASRFGEGAQTNS 558
+F +FR NK++S+LI +L P V KTFN ++TGH +H+L P S E Q S
Sbjct: 20 IFFQFRENKSWSQLISYLKSEQPKCV--KTFNLTNTGHRYHALWAYNPISDKREKKQI-S 76
Query: 559 IADRIFGKAVQQHNKRFQTVH*VVRVYRTDRSVDCCCPCQLLHKSLFNTRNYVKTLNCKL 738
+ +R K Q H + R D CPC+ +++ L +++ K
Sbjct: 77 LDER---KIEQMHRVTNNNAK-LYSEIRKSGIDDNTCPCETINEYLLEIKSFKNARGHKN 132
Query: 739 FDIKPPK 759
F+ P K
Sbjct: 133 FNQPPAK 139
>UniRef50_P41729 Cluster: Uncharacterized 41.0 kDa protein in
P143-LEF5 intergenic region; n=3; Granulovirus|Rep:
Uncharacterized 41.0 kDa protein in P143-LEF5 intergenic
region - Cryptophlebia leucotreta granulosis virus
(ClGV) (Cryptophlebialeucotreta granulovirus)
Length = 343
Score = 38.3 bits (85), Expect = 0.21
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -3
Query: 118 DNMCDIRHNIKRAFKTPVLGHMCVLSNKPPMYSFLKEW 5
D M D R + K +K +GH+ V+ +K P Y L EW
Sbjct: 107 DEMQDFRQHFKTKYKLSYMGHIFVIPHKQPTYDLLTEW 144
>UniRef50_A2DNM0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 695
Score = 37.1 bits (82), Expect = 0.47
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = -3
Query: 259 VRDLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNYCMQIFKAPADNMCDIRHNIKRA 80
+R + F K F + I F +C ++EN Y + + DN+C I ++ A
Sbjct: 435 IRYFSAIRFNKMSFTYFNIADFIGIRFICGVLENPTQYIPDLTLSKPDNVCGICRLLRIA 494
Query: 79 FKTPVLGHMC 50
FK LG MC
Sbjct: 495 FK---LGQMC 501
>UniRef50_A7ATN2 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 527
Score = 34.7 bits (76), Expect = 2.5
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -3
Query: 256 RDLKYLGFEKYKFFEYVIFQFCNDPHLCKIIENNYNYCMQ-IFKAPADNMCDIRHNIKRA 80
R L FE FF + + ++EN+ NYC+Q +FK P M DI H I +A
Sbjct: 365 RGLPEFQFELMDFFSIAMISYVR----LNLLENDINYCLQRLFKFPP--MEDISHLIAKA 418
Query: 79 FKTPVL 62
K VL
Sbjct: 419 HKIRVL 424
>UniRef50_Q2J7N2 Cluster: Benzoate membrane transport protein; n=2;
Bacteria|Rep: Benzoate membrane transport protein -
Frankia sp. (strain CcI3)
Length = 516
Score = 33.1 bits (72), Expect = 7.7
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 27 IGGLLLSTHMWPNTGVLNARLILCLMSHMLSAGALNICI 143
+GGL+L T +WP G L A + + ML+ L++C+
Sbjct: 221 LGGLILLTALWPRLGTLIAAIPAPIAQAMLAGVLLSLCL 259
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,918,241
Number of Sequences: 1657284
Number of extensions: 15041028
Number of successful extensions: 43407
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 41083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43372
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -