Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120163.Seq
         (762 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021249-1|AAX33397.1|  998|Drosophila melanogaster RE60631p pro...    31   1.3  
AE014297-2206|AAF55313.2| 1067|Drosophila melanogaster CG12753-P...    31   1.3  
AE014297-2205|ABC66179.1|  998|Drosophila melanogaster CG12753-P...    31   1.3  
AY051646-1|AAK93070.1|  235|Drosophila melanogaster GM14348p pro...    31   2.3  
AE014134-1137|AAF52422.1|  235|Drosophila melanogaster CG11329-P...    31   2.3  

>BT021249-1|AAX33397.1|  998|Drosophila melanogaster RE60631p
           protein.
          Length = 998

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +2

Query: 554 IRLQTEYLAKLFNNTINDFKLYTELYEFIERTEVSIAVVRASYCTRVY 697
           ++L T  +   +N   NDF LYTE  +F    E  + +   +    VY
Sbjct: 152 LKLNTHTIHFFYNEHTNDFPLYTEAIKFFNHPESMVRIAVRTISLNVY 199


>AE014297-2206|AAF55313.2| 1067|Drosophila melanogaster CG12753-PA,
           isoform A protein.
          Length = 1067

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +2

Query: 554 IRLQTEYLAKLFNNTINDFKLYTELYEFIERTEVSIAVVRASYCTRVY 697
           ++L T  +   +N   NDF LYTE  +F    E  + +   +    VY
Sbjct: 152 LKLNTHTIHFFYNEHTNDFPLYTEAIKFFNHPESMVRIAVRTISLNVY 199


>AE014297-2205|ABC66179.1|  998|Drosophila melanogaster CG12753-PB,
           isoform B protein.
          Length = 998

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +2

Query: 554 IRLQTEYLAKLFNNTINDFKLYTELYEFIERTEVSIAVVRASYCTRVY 697
           ++L T  +   +N   NDF LYTE  +F    E  + +   +    VY
Sbjct: 152 LKLNTHTIHFFYNEHTNDFPLYTEAIKFFNHPESMVRIAVRTISLNVY 199


>AY051646-1|AAK93070.1|  235|Drosophila melanogaster GM14348p
           protein.
          Length = 235

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +1

Query: 274 NMSFNDGVVKAQTDPFALKRGGHNVQKWTSYALFKLFKEFRINKNYSKLID---FLTENF 444
           N ++ND V++A + P    R    +QKW     F    + RI      L++   +L+ N 
Sbjct: 119 NDAYNDIVLQASSKPLKKSRMQELLQKWIQMGYFMEVTD-RIYLGPRSLVELSFYLSSNH 177

Query: 445 PNNVKNKT 468
            +N+KN T
Sbjct: 178 ADNIKNCT 185


>AE014134-1137|AAF52422.1|  235|Drosophila melanogaster CG11329-PA
           protein.
          Length = 235

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +1

Query: 274 NMSFNDGVVKAQTDPFALKRGGHNVQKWTSYALFKLFKEFRINKNYSKLID---FLTENF 444
           N ++ND V++A + P    R    +QKW     F    + RI      L++   +L+ N 
Sbjct: 119 NDAYNDIVLQASSKPLKKSRMQELLQKWIQMGYFMEVTD-RIYLGPRSLVELSFYLSSNH 177

Query: 445 PNNVKNKT 468
            +N+KN T
Sbjct: 178 ADNIKNCT 185


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,488,334
Number of Sequences: 53049
Number of extensions: 729343
Number of successful extensions: 1986
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1977
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)