Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120163.Seq
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025470-3|AAB71057.1|  394|Caenorhabditis elegans Hypothetical ...    33   0.29 
U88315-15|AAB42365.1|  351|Caenorhabditis elegans Annexin family...    30   1.6  
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    29   4.8  
Z77666-3|CAB01225.1|  698|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z72517-3|CAA96695.1|  717|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z81124-12|CAI46579.2|  489|Caenorhabditis elegans Hypothetical p...    28   8.3  
U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>AF025470-3|AAB71057.1|  394|Caenorhabditis elegans Hypothetical
           protein W10D9.3 protein.
          Length = 394

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = +1

Query: 355 WTSYALFKLFKEFRINKNYSKLIDFLTENFPNNVKNKTFNFSSTGHLFHSLPRTCPASRF 534
           W  +     + +F   +NY   IDFL E     ++N  F FS      +S P+  P  RF
Sbjct: 156 WNCFDFVMEYMKFTNYRNYRSKIDFLEEFVTKKLENVNFKFSQQN--LNSAPQMNPDHRF 213


>U88315-15|AAB42365.1|  351|Caenorhabditis elegans Annexin family
           protein 4 protein.
          Length = 351

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = -1

Query: 369 GVTGPFLHIMASSLQSKWICLRLNDAIIKRHVLVL 265
           GV G  +H++  + + + + +R+ND ++ +HV +L
Sbjct: 157 GVVGKMMHLLLCNNREEGLGVRVNDELVDKHVKIL 191


>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical
           protein T25C12.3 protein.
          Length = 2103

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -1

Query: 201 FNFATTRTCARL*KTTTITVCKYLKRPPTTCATSGTILNAHSKRQCWATCVC--LATNRQ 28
           FNF  T   + +   T+       + P TTC  +GT+LN  ++ Q   TC C  L   +Q
Sbjct: 280 FNFRRTGRFSCMQLLTSPAPPTTTQAPVTTCFNNGTLLNVANQGQ---TCFCSELFNGKQ 336

Query: 27  C 25
           C
Sbjct: 337 C 337


>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical
           protein T25C12.3 protein.
          Length = 2103

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -1

Query: 201 FNFATTRTCARL*KTTTITVCKYLKRPPTTCATSGTILNAHSKRQCWATCVC--LATNRQ 28
           FNF  T   + +   T+       + P TTC  +GT+LN  ++ Q   TC C  L   +Q
Sbjct: 280 FNFRRTGRFSCMQLLTSPAPPTTTQAPVTTCFNNGTLLNVANQGQ---TCFCSELFNGKQ 336

Query: 27  C 25
           C
Sbjct: 337 C 337


>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical
           protein T25C12.3 protein.
          Length = 2103

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -1

Query: 201 FNFATTRTCARL*KTTTITVCKYLKRPPTTCATSGTILNAHSKRQCWATCVC--LATNRQ 28
           FNF  T   + +   T+       + P TTC  +GT+LN  ++ Q   TC C  L   +Q
Sbjct: 280 FNFRRTGRFSCMQLLTSPAPPTTTQAPVTTCFNNGTLLNVANQGQ---TCFCSELFNGKQ 336

Query: 27  C 25
           C
Sbjct: 337 C 337


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +1

Query: 367  ALFKLFKEFRINKNYSKLIDFLTENFPNNVKNKTFNFSSTGHL 495
            +L+  FKE +      KL+++L +N+ NN    T     T +L
Sbjct: 4018 SLYTQFKELKEESKKRKLVEYLDQNYKNNKSYSTLQTLITFNL 4060


>Z77666-3|CAB01225.1|  698|Caenorhabditis elegans Hypothetical
           protein K08E7.3 protein.
          Length = 698

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 709 FSC*IDSCAIAGTDNSNRHFGPFDKLVQLSVQFEIVYCVVEQ 584
           FS  + +C I  +    R   PFD  V L +Q E  Y + EQ
Sbjct: 498 FSRDLPACGIRASKYRRRALSPFDNRVNLEIQDEKSYEIREQ 539


>Z72517-3|CAA96695.1|  717|Caenorhabditis elegans Hypothetical
           protein T28F4.4 protein.
          Length = 717

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +3

Query: 606 ISNCTLSCTSLSNGPKCRLLLSV 674
           +S CT SCT++S+  +C  LL++
Sbjct: 604 LSTCTSSCTTVSSAEQCATLLAL 626


>Z81124-12|CAI46579.2|  489|Caenorhabditis elegans Hypothetical
           protein T21B4.17 protein.
          Length = 489

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +2

Query: 536 VKERKQIRLQTEYLAKLFNNTINDFKLYTE--LYEFIERTEVSIAVVR 673
           +K+R++    +E   KLF  T + F+   +  + E IE+T++    +R
Sbjct: 203 IKDREKFERHSESAVKLFKETFSKFQFPNDSLIAELIEKTQIEGVKIR 250


>U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical
           protein R09H3.1 protein.
          Length = 1073

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +1

Query: 370 LFKLFKEFRINKNYSKLIDFLTENFPNNVKNKTFNFSS-TGHLFHSLPRTCPASRFGEGA 546
           ++KL  +F   +N +   +F  ENF  NV N   NFSS T +L        PAS F + +
Sbjct: 278 VYKLLIQFSGEENEN--FEFFHENFKENVLNNR-NFSSQTKYLLLKQHVLSPASEFIQKS 334

Query: 547 QTNSIADRIFGKAVQQHNKRFQTV 618
           +        F +AV Q  K  + V
Sbjct: 335 EN-------FSEAVNQSLKELEIV 351


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,086,573
Number of Sequences: 27780
Number of extensions: 392508
Number of successful extensions: 1248
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)