Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120163.Seq
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              24   1.3  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    22   7.1  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    22   7.1  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    22   7.1  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   7.1  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    22   7.1  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    22   7.1  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    22   7.1  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   7.1  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 515 VRGNE*NRWPVDEKLNVLFLTLLGKFSV 432
           V   E   +P DEKL   F  +L KF+V
Sbjct: 54  VEATEYGEFPEDEKLKCYFNCVLEKFNV 81


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 193 CNDPHLCKIIENNYNY 146
           C +P +   + NNY Y
Sbjct: 76  CKEPKIISSLSNNYKY 91


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 193 CNDPHLCKIIENNYNY 146
           C +P +   + NNY Y
Sbjct: 76  CKEPKIISSLSNNYKY 91


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 193 CNDPHLCKIIENNYNY 146
           C +P +   + NNY Y
Sbjct: 76  CKEPKIISSLSNNYKY 91


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 193 CNDPHLCKIIENNYNY 146
           C +P +   + NNY Y
Sbjct: 76  CKEPKIISSLSNNYKY 91


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 193 CNDPHLCKIIENNYNY 146
           C +P +   + NNY Y
Sbjct: 76  CKEPKIISSLSNNYKY 91


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 193 CNDPHLCKIIENNYNY 146
           C +P +   + NNY Y
Sbjct: 76  CKEPKIISSLSNNYKY 91


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 193 CNDPHLCKIIENNYNY 146
           C +P +   + NNY Y
Sbjct: 76  CKEPKIISSLSNNYKY 91


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 138 KYLKRPPTTCATSGTI 91
           K +  PP  CA SG+I
Sbjct: 309 KSITEPPKNCADSGSI 324


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,189
Number of Sequences: 438
Number of extensions: 5087
Number of successful extensions: 37
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)